Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: G8_02428_INS1115870

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Chr11

12540734

12545134

SV Length:

Query Start:

Query End:

Allele sv Count:

4394 bp

11755747

11760140

7

Gene_id	Chromosome	Start	End
Os02428G1121531000.01	Chr11	11759774	11762933

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
G8_02428_INS1115870	Chr11	12540734	12545134	11755747	11760140	4394
G8_117425_INS1120300	Chr11	12540734	12546546	11582906	11590912	8007
G8_127742_INS1111110	Chr11	12540734	12541523	13781688	13782478	791
G8_132278_INS1121400	Chr11	12540734	12545134	11705891	11710284	4394
G8_R527_INS1110630	Chr11	12540734	12545134	13317937	13322341	4405
G8_Tumba_INS1113200	Chr11	12540734	12545134	13055090	13059491	4402
G8_MH63RS3_INS1113490	Chr11	12540734	12545134	13302702	13307106	4405

>G8_02428_INS1115870
TGATGAACCCTGAGTTCCTCTCAACACTCAAGGCTGTTGTTGGCCCGATCTTTCGGTGAGTTGTGATAACTACGATTTGGGAGAAACGTTGACGATCCGACTACAACCGTACGAGACGTTGTGTTGCGCCTTAGCGATCGATACACCTCTCCGTAGGTTGTTGATCTTGCCGGTGCAGATCAACCCTATTCCTGCAAGCAAATCGAAGAAACAAGCAAGAACAAGAATAAAGCAATCTGATATTGCAAATAGGAATTTAATACAAATGATAAGTTGGGGTTCCGAAGAACAAGCAGACGGACGGTCTAGCCGACACGCGCGCTGCAAGCAAGTAGCAATGGCTAAACTTTAATCTAACAAAAACCCAAGAAACCCTGAAGGGGTACCTAACTATTTATAGAGGTGGGAGGACGACTAAGAGGGTCCAAGGGTCGTGCTCCACCAGATTGGGGCGCACCCCACATGGGCCCCACATGGGCCAGGGTCCCAAACAAAGTTACAAGCCCATTGGCCCAATACAGGAGACGCAGCACCTTGCTTTTGTGATTGCGGCCAAACGAGATAGATTTCCGAGATGAGGCTGGATCCGTTGGAAGGAGGACTTCGAGAGCTTTCCATCAAGTACTCACGGGCCCAAAACGGAGCACGTATGTAGATTTGGCGGCCGTTTGAAGTCAGCAATGTAACACGTGGCCGAATCAGATTGCAGCACATGGAGGACTTGATCTTGATGTCTTCTTGTTGATTCATGATGTGAGCAATGGTCGTATCCATAGTAGCCATGGTCACATCATCCTCCCCTTCTTCACAGAAAACCGTCCTCGGTTTTTCCATATGGTGCTCTTCGCGCAGTCCACTGAAAACAACCTGTTTCTTGCAATCAAAACAAGACAAACTCGAGACAATATGATTAGCAGTAACATGTCTCTCTAGCTTGCATATTTTATCCGGAACTACAAGATGTTCTATATCTGAACAAATGTAAACTCTATGCACCAAAAATATTCCTCTATCATTATATTCGCCAAAGATATGAAAAATAGCATTAGTTGGACATGGCAAATCAGATTTAGCAAATAATTTCTCCTTCAAATTATCGAGCTCACAAAAATCATCAAACTGAACATAGCCCAAAGTATTTAAAGAAGATAGCAATTCGCGTTCCTCTACTTCATTAGCAATGTGAACAACATGCTTAGAATCAGCACACAAAGAAATAGTAGAACTAACATGTTCATTCACTAGTTGTGGCATGGATATAAGTGAAACATTATCACACAACTCTTCTTTATCACAAGGAACAGCAAGTAAATCAACTTGTGACAAAGGCAACTCAGTAATTGATTCCACTAATGGTTGCTCTACTATAGCATGAAAAGTGGACAAGTGTAGCTCACCTTGAGAATACTCACCTTCATTTCTCTCAGCACCATTTAATTTACCTTGCGAACTTTCTTCAGATAATGTAGCTGCATCAGCCTTCTCCTCATTCGCGAGTGATGGAAGTGACATCTCAAACATATCGTTCTTCTCATTTTGGAGACTTTTCTGAACTTCCTGCAAAACATCAGTGATAGGAGGCACAAGCATATCTTGTTGCTCCATTGGATTCTCCAAAATTTTGCGCTCAACAATGCAAGCAAGCATGAACAATTGGCCTATATGATTATATGTCACATTAACAAGCCCAGCCTGAATATTGAAATTAAGCCCTCTGAAAAATCTAGTCATTGTGTTCTCATTAGATTCTTGTAAACCACTATAAGTGATACAAATTTTAAAATCATGAAAGTACTCCCTAACAGTTTTGTCACCTTGTTTTAGATGTTCCCATTTCTCAAGGAGAGCACGTCTATAGTATGAAAACACAAATCTTTTTCTCATCAGTATTTTGCATTCATCCCAAGTTTCAAGCTTATTCCCCACAGTATGCCACCAAAAAGATGCAGAACCGGTACACTTATTACTAGCAGCCTTAATCATTTGAGCATTAGAAAAATCATACTCATCAAATTGTTTTTTTACTGCTAGCTCCCAATTAATGTATGCAGCGGAATCATACTTTCCATCATAGACTGGTAACTTACATGCAACTTGTGCAAAATTATAGTCATGTACCTCATATGCATCACGTGAAGAAGTCGTCATATCTCGTCGAAGGTGTAGATGTTGACGTTGAGCATGACCATCTTGTTTCCCCTTGCGCAATCCTGCCATGGTTAGCAGCAAACAAGAAACATACACAAGAATATACACGCTCCTATCAACTACTAGGTACTGGCAGCTCAAATCTCACACACACTCAAGCTTTTAACCAAGCTCTTACAAGATATTACCAATGCAAGTGGAATGGTGATGTACACCGACTCAACCAAGCACCCCAATAGAGGTTGGATATATCGATGCCTCGGCAAACACTTGCTGTACGGCTGCAATCAAATCTGTGGAGCTCTGGGTAGGCTTAAATATGTAGCAAAGGAATAGCAAATGCTCAAATCAGAGAACGCAAAGTTGAATAATTGTTCAAAGTCAAGTACCGTGCTGGTCCTAGGCTAGAACGTACTAGAGACGCGAGCCTAGACACAAACGGTACCACAAAATAGCACCAGAAACAACTCAAGCACACTCTGATGTATGAAGTTCAGCTCAAACAAAACAATATTTTCTCTTTTCTTTCTTTCTAATTTCTTCTTTTCTTTTTTTTCCTTTTCTTTTCTGATTTTTTTTGGTGCGGATTTTTTTTCTTTTTTTTGCACCTTTCTGCCTTTTTTTTTCTCACTTTTTTTTCTTATTTTTTTTAACAAAAACTGACTCAAGGACCTTAATGTAAGATTACAGGGACTCAAACATAAATATAAAATTTATAGGGACTCAAATGTAAAAGTCTAAACCCAAAATTAAAATTATACAAAAAATGGAATGCTGAATTTATGCCGGTTCCGTTTTTCCAAACAGATCTCGAAACCGACACCAAACAAAAATTCGCCAAGGTGTTTGACACAACTCGGAACGGTGGAAGAGAGGGAGGGAGTCGGACTCGGCCAAAGGGGCGAGTGGGACTCGGCCAGGAGGTGGAGTGGATGGCAGCCGAATTTGGTGTATGGGATAAAAAGGAAACTGATTTTTAACCAATCCAATCTACTATATCTTTCCAAAACAAACTTGACTACTTCCAAAATCAGATATGGTAATTCACCTTCCTCCTCTCGTGCACGACACAGGCACGGCCAAAACAAACACACACAAGGATCGGCAAACTCTAGATGCAACTCAAGAACTCCAAAACTAACCGATAGAAACTTCTGAAAACTACAAAAATAGAACCGTGGCAGCGAGCCGATTCCGTTTTCGTAGGTCCCGACAACAACAGAGACACGGTGGCAGCGACGACTGTGGTACAAAACGTGACCAGAACTCGAAACTCTAAACGAACTAGACGCTAAGACCAGCAACACGACGTGACGATGCAACACAAAATTCAACAAAGCAAAAACTGAAAAGAACAATGCAATGGCACAATATGGCTAGGTAAATGATACGAATTTTTTTGTATGGCTATTTTCTGGTTATAGGAAGATAAAAACTCACCGAGCAACGAAAGCTCTGATACCACCTGATGAACCCTGAGTTCCTCTCAACACTCAAGGCTGTTGTTGGCCCGATCTTTCGGTGAGTTGTGATAACTACGATTTGGGAGAAACGTTGACGATCCGACTACAACCGTACGAGACGTTGTGTTGCGCCTTAGCGATCGATACACCTCTCCGTAGGTTGTTGATCTTGCCGGTGCAGATCAACCCTATTCCTGCAAGCAAATCGAAGAAACAAGCAAGAACAAGAATAAAGCAATCTGATATTGCAAATAGGAATTTAATACAAATGATAAGTTGGGGTTCCGAAGAACAAGCAGACGGACGGTCTAGCCGACACGCGCGCTGCAAGCAAGTAGCAATGGCTAAACTTTAATCTAACAAAAACCCAAGAAACCCTGAAGGGGTACCTAACTATTTATAGAGGTGGGAGGACGACTAAGAGGGTCCAAGGGTCGTGCTCCACCAGATTGGGGCGCACCCCACATGGGCCCCACATGGGCCAGGGTCCCAAACAAAGTTACAAGCCCATTGGCCCAATACAGGAGACGCAGCACCTTGCTTTTGTGATTGCGGCCAAACGAGATAGATTTCCGAGATGAGGCTGGATCCGTTGGAAGGAGGACTTCGAGAGCTTTCCATCAAGTACTCACGGGCCCAAAACGGAGCACGTATGTAGATTTGGCGGCCGTTTGAAGTCAGCAATGTAACACGTGGCCGAATCAGATTGCAGCACATGGAGGACTTGATCTTGATGTCTTCTTGTTGATTCATGATGTGAGCAATGGTCGTATCCATAGTAGC