Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: G46_G630_TRA0139750

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

TRA

Chr01

42733370

42733605

SV Length:

Query Start:

Query End:

Allele sv Count:

237 bp

38274017

38274253

14

Gene_id	Chromosome	Start	End
OsG630G0101406600.01	Chr01	38265821	38275423

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
G46_125827_TRA0140420	Chr01	42733370	42733605	38390604	38390840	237
G46_127518_TRA0144780	Chr01	42733370	42733605	38360544	38360780	237
G46_127742_TRA0134830	Chr01	42733370	42733605	37861026	37861262	237
G46_132424_TRA0141830	Chr01	42733370	42733605	37981632	37981868	237
G46_FH838_TRA0140530	Chr01	42733370	42733605	38351261	38351497	237
G46_G630_TRA0139750	Chr01	42733370	42733605	38274017	38274253	237
G46_IR64_TRA0132900	Chr01	42733370	42733605	37907637	37907873	237
G46_J4155_TRA0128180	Chr01	42733370	42733605	38145236	38145472	237
G46_J4155S_TRA0128730	Chr01	42733370	42733605	38621817	38622053	237
G46_Lemont_TRA0159070	Chr01	42733370	42733605	37755494	37755730	237
G46_R527_TRA0139080	Chr01	42733370	42733605	37929114	37929350	237
G46_Y3551_TRA0140690	Chr01	42733370	42733605	37968484	37968720	237
G46_Y58S_TRA0142200	Chr01	42733370	42733605	37082305	37082541	237
G46_MH63RS3_TRA0141700	Chr01	42733370	42733605	38545514	38545750	237

>G46_G630_TRA0139750
GTTCGGCTGAGAGCGTTCCCAGCGCGCACAGTAAACACGGAAAACGGAGCGGTCATTAGCGCGTGATTAATTAAGTATTAGCTAATTTTTTTTAAAAAAATGGATTAATTTGATTTTTTTTAAACAACTTTTGTATAGAAACTTTTTGCAAAAAAATGCACCGTGTAGTAGTTTGAAAAGCGTGCGCGGACGAAAAGTTACTGTGCACGCCGGGAAAACAGCTGCCGAACACAGCCT