Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: G46_127564_DEL0300600

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Os XI-1A: G46 | G46

Os XI-3A: LIMA | Os127564RS1

Chr03

1773961

1775842

SV Length:

Query Start:

Query End:

Allele sv Count:

1882 bp

1836038

1836044

33

Gene_id	Chromosome	Start	End
OsLima_03g0002510	Chr03	1824981	1839043
OsLima_03g0002520	Chr03	1835986	1840554

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
G46_117425_DEL0301470	Chr03	1773961	1775842	1814017	1814023	1882
G46_117534_DEL0301290	Chr03	1773961	1775842	1815061	1815067	1882
G46_125619_DEL0300680	Chr03	1773961	1775842	1812934	1812940	1882
G46_127518_DEL0300700	Chr03	1773961	1775842	1851785	1851791	1882
G46_127564_DEL0300600	Chr03	1773961	1775842	1836038	1836044	1882
G46_127652_DEL0301570	Chr03	1773961	1775842	1776558	1776564	1882
G46_127742_DEL0300600	Chr03	1773961	1775842	1843943	1843949	1882
G46_132424_DEL0300690	Chr03	1773961	1775842	1829111	1829117	1882
G46_Basmati1_DEL0300830	Chr03	1773961	1775842	1815313	1815319	1882
G46_CN1_DEL0300520	Chr03	1773961	1775842	1840808	1840814	1882
G46_D62_DEL0300610	Chr03	1773961	1775842	1837376	1837382	1882
G46_FH838_DEL0300560	Chr03	1773961	1775842	1832252	1832258	1882
G46_FS32_DEL0300570	Chr03	1773961	1775842	1839758	1839764	1882
G46_G630_DEL0300540	Chr03	1773961	1775842	1836778	1836784	1882
G46_G8_DEL0300620	Chr03	1773961	1775842	1831506	1831512	1882
G46_HZ_DEL0300600	Chr03	1773961	1775842	1846810	1846816	1882
G46_IR64_DEL0301050	Chr03	1773961	1775842	1796191	1796197	1882
G46_J4155_DEL0300640	Chr03	1773961	1775842	1835649	1835655	1882
G46_J4155S_DEL0300660	Chr03	1773961	1775842	1848022	1848028	1882
G46_LK638S_DEL0300660	Chr03	1773961	1775842	1855087	1855093	1882
G46_R498_DEL0300680	Chr03	1773961	1775842	1844158	1844164	1882
G46_R527_DEL0300730	Chr03	1773961	1775842	1832908	1832914	1882
G46_R9311_DEL0300670	Chr03	1773961	1775842	1837472	1837478	1882
G46_S548_DEL0300590	Chr03	1773961	1775842	1830495	1830501	1882
G46_TM_DEL0300610	Chr03	1773961	1775842	1821605	1821611	1882
G46_Tumba_DEL0300570	Chr03	1773961	1775842	1836585	1836591	1882
G46_WSSM_DEL0300770	Chr03	1773961	1775842	1792155	1792161	1882
G46_XL628S_DEL0300530	Chr03	1773961	1775842	1848619	1848625	1882
G46_Y3551_DEL0300460	Chr03	1773961	1775842	1822790	1822796	1882
G46_Y58S_DEL0300630	Chr03	1773961	1775842	1836623	1836629	1882
G46_YX1_DEL0300640	Chr03	1773961	1775842	1840238	1840244	1882
G46_OglaRS2_DEL0302580	Chr03	1773961	1775842	1740131	1740137	1882
G46_MH63RS3_DEL0300680	Chr03	1773961	1775842	1833390	1833396	1882

>G46_127564_DEL0300600
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