Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: FS32_Y3551_DEL1202920

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Chr12

5716911

5717657

SV Length:

Query Start:

Query End:

Allele sv Count:

747 bp

5550401

5551147

7 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
FS32_FH838_DEL1203110	Chr12	5716911	5717657	5550078	5550824	747
FS32_LK638S_DEL1202860	Chr12	5716911	5723013	5600452	5603684	3233
FS32_R498_DEL1203090	Chr12	5716911	5723013	5562551	5565783	3233
FS32_XL628S_DEL1203010	Chr12	5716911	5723013	5592508	5595740	3233
FS32_Y3551_DEL1202920	Chr12	5716911	5717657	5550401	5551147	747
FS32_ZS97RS3_DEL1203500	Chr12	5716911	5723013	5569824	5573056	3233
FS32_MH63RS3_DEL1203050	Chr12	5716911	5717657	5553643	5554389	747

>FS32_Y3551_DEL1202920
AAACGCCTTAGCCGTGGTATTATAGGGAAATACCACATCACCTTAGCAGGAATTCTCTTCTTCGTTAGCTGCCCGTCAACCTCACCTGGATCATCTCGTCTAATCTTGTATCGTAGTGCTTTACAAACAGCGCATGCTTCTAGGTTCTCGTACTCCTCACCACGATATAGGATACAATCATTCGGACATGCGTGAATCTTCTGAACTTCCAGTCCTAGAGGGCAGACTATCTTCTTAGCCTCGTACGTTGTCTCGGGCAATTTGTTTCCCTCCGGAAGAATGTTCTTGACGAGTTTCAATAAATCGCCAAATGCCTTGTCACTACCACCATTTTTTGCCTTCCATTGCAAGAACTCCAGAGTGGTATCCAACTTTTTGTGCCCCTGCTCGCAACCTGGGAAAAACGACGTTCTGTGATCCTCTAACATCTTGTCCAATTTATGGGCCCCCTTTTCACTTTCGCAGTCCTCCTTGGCATCCTGCAACATCTGACCAAGATCATCTGCAACGTCGTTATAATCAGCATCTCTATCCTCCTCGCCCGTTTGATTTCCTTCAGATCCAGCGTACTGAGCAAAGTCTAGAATATTGTCGTCTTCCACTTCATCTTTTTCCATTTCAACCCCTTGCTCTCCGTGGGATGTCCAACAATTATAGCTTGGCATGAACCCCGACTCAAACAAGTGGAAATGAATAGTCCTGGATGCAGAATACTCCTTCTGATTCTTACACTTATTGCATGGACAA