Variation ID: DG_IR64_DEL0420570

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os XI-1A: DG | DG
Os XI-1B1: IR 64 | OsIR64RS1
Chr04
15803004
15805532
SV Length:
Query Start:
Query End:
Allele sv Count:
3109 bp
27264208
27267316
21
Gene_id Chromosome Start End
OsIR64_04g0021500 Chr04 27264102 27273790
SV_id Chromosome ref_start ref_end query_start query_end length
DG_125619_DEL0426720 Chr04 15803004 15803915 28679227 28680141 915
DG_125827_DEL0421740 Chr04 15803004 15805532 29653818 29656926 3109
DG_127652_DEL0429100 Chr04 15803004 15805532 27502175 27505270 3096
DG_127742_DEL0427070 Chr04 15803004 15805532 28906685 28909793 3109
DG_D62_DEL0429060 Chr04 15803004 15805532 28336512 28339618 3107
DG_G46_DEL0415850 Chr04 15803004 15805532 27882868 27885976 3109
DG_G8_DEL0424520 Chr04 15803004 15805532 28615902 28619007 3106
DG_HZ_DEL0428200 Chr04 15803004 15805532 29078352 29081460 3109
DG_II32_DEL0422060 Chr04 15803004 15805532 28835283 28838387 3105
DG_IR64_DEL0420570 Chr04 15803004 15805532 27264208 27267316 3109
DG_LK638S_DEL0411920 Chr04 15803004 15805532 28833545 28836653 3109
DG_R498_DEL0428010 Chr04 15803004 15805532 27798869 27801977 3109
DG_R527_DEL0428910 Chr04 15803004 15805532 28379530 28382638 3109
DG_R9311_DEL0426530 Chr04 15803004 15805532 28987438 28990546 3109
DG_S548_DEL0428410 Chr04 15803004 15805532 27860587 27863695 3109
DG_TM_DEL0420800 Chr04 15803004 15805532 27025224 27028332 3109
DG_WSSM_DEL0427950 Chr04 15803004 15805532 28467608 28470715 3108
DG_XL628S_DEL0413760 Chr04 15803004 15805532 28960673 28963781 3109
DG_YX1_DEL0424940 Chr04 15803004 15805532 27362265 27365373 3109
DG_ZS97RS3_DEL0421950 Chr04 15803004 15805532 29174618 29177726 3109
DG_MH63RS3_DEL0430530 Chr04 15803004 15805532 29399678 29402786 3109

>DG_IR64_DEL0420570
TAGGGCTGTCAAAAAAGCTCGGAGCTCGCGAGCAGCTCGAGCTCGGCTCAAGTTCGACTCGGCAAGGATTCGAGCCGAGCTCGAGCTTGTCTCGAAGCTCGCGAGTTCTACCGAGACGAGCTCGAGCTATTCGGCAGAAGCTTGAAATTTTCACTCCCGCTACCCATCCCAATTTCTCCCGCACTCCAATTCCAAAATCCTACCACCAACAGCAGTCCATCACCTAACCATTTATTTCCCTTATATCCCCATCCCGTATCCAAACCCTAGCTCATTTGCTCTCTTCCTCGAAACATTTCTCTTCTAGATCTACAATCCTAGGCTGCTCTAGTGCTCCACTGACCACTGCTGTGGATCTAGCCAAGCACCGTCTATCCTTCGCCTCTCCTGTCCAGGAAGAACCCCATGGAGGACAGCAGCAGCCCACCGCCTCCGCCGTGAGTGACGAACCGACGACTCGGATCTGAGTAAGTTTCCTCTTCTTTCTTTGTTTCACATTTTTATTTCTTTTGCACCCACATGTATCTAGGGCCCTACATGTATTAACTGTGTAGTGTTTAGTTGCTTGATGGATGTTATTGATTTACATTGAATTTTATGGACTAGGTGGAGACATGGAGTAGTACTTATCTTGCTGTTCTCCTCTTCTGAAGAAAGACTGAAGGTTGCAGAACACCGTGTGTTTGCCATTTGCCAAGGTAAATTGATGGCAATGCTTTTCTTGTTGTACTTGTTTGATTCCTTCCCTTGTGCAGAATATATATTGATAGCAGTTGGTATTTTTATTTTTTGTAGATGTCTGTAAACCTGCAAAGACAGCTATCTGTAGAGATCGAGTCACCGAGCAATAGAGATGGCATAGCAGCAACAGAAGCACAACCGAATCAGCAGCTAGTACCAGGTGAAGTAAGGGGAGAAGAGGGCCAAGAGGGAAACCCAACTAAAGCCACCAGGAAAAAGAAATCTCCATTGTGGGATTTCTTTGAAGAATGCACTGTGCCATCAAAGAAGAAGAAAGGAGAAATGGAAAATAAGGTCAAATGTAAGGCATGTGAAACTCTGCTCACCAAGAATAGTAGTGGCACTACAACACATTGGCGGAGGCATTTAGAGCAGTGTGATTATCACAAGCTTCAACAAAAATCCATAAAACAACAGAATATCAATTTCCCTAGCCTTGATGAAGGTGATGTTGATCTTGATGCTCCTTGTGTTTCTGTCCCTGGTTATTATGATCCTACAAAGATACGTGAGCTTATTTGCAAAATGATCATTGTCTATGAGTTGCCATTTTGCCTTGTGGAGTATACATGGTTTAATGTTTTGCTAAAGAGGCTAAACCCTTCTTACAAAAAGGTCTCTAGAAATACCATTAGAAGTGATTGTATGAGGCTTTATGAATCTGAAAAAGAAAAACTGAAGAGGACTTTCAAAGATGTTAGAAAGATAAGCCTCACATGTGATCTTTGGACCTCTAACCAAACAATTTGCTACATGAGCCTTGTTGCCCACTACATAGATGCTGATTGGTCAATGCATTGTCGTGTTATTAACTTTCTTGAGTTGGAGCCTCCACATACTGGTGTAGTTATTGCTAATGCCATTTCTGATTGTCTTGCTTCATGGAGAATTGAGGACAAGATAGCTAGCATCACATTTGACAATGCCTCAAGTAATGACAGTGCTGCTAACCTGTTGCTTGCCAAGTTTACAAAACGTGGTTCACTTTGGTTTTATGGAAAATTCCTTCATATCCGCTGTTGTGCTCACATTCTGAACTTAATTGTCCAAGATGGTCTGGCTGTGATTAAGCATATAATTGACAAAGTTAGGGACACTATCAAGTACATCAAGAAATCAAACAATCGAGCATACAAGTTCAGTGCTGATATTGATTCTCTCAACCTTAAAAGTGACATGGGTTTGGCTATTGATTCCTGCACAAGGTGGGGCTCAACCTTCAAAATGCTGCAATCTGCATTTTTTTATAGGTCTGCCTTGGATGTATATGCTGCAGGAGATGCAAACTATAGGTGGCTGCCAACACCAGAGGAATGGAATCTATATTGTGAAGTCAATGATGCCCTTTCTGTCATTCATGCAGCCACTGAGGAGTTCTCAGGTTCAACCTACCCAACATCTAACCTTTTTTATTCTCACATTGTCGATATTAAGAGAGTACTAGGTCAGTTGTTGAAGTCCAAAGACCCAATTCTTAAAGAAATGGCAAATGCAATGCTTGAAAATTTTGAGAAGTACTGGGGCCCAGAATGCAATACTTTGTTTGCAGTTGCTTTGGTTCTAGACCCAAGGTTTAAGATGGGTATGATTAACTACACATTCCCTGCTTTGTATGAAGAAACTGTACTTCCTAAGAAACTTGCAAATGTGGAATCCACATTGAAATCTTTGCATGCATCATATGAAAGTGAACTCCAGAGCACATCAAAGGAAAATGATGCCACCACTCAATCTACTAGTACATCTCTGGGCACTACTAGTAGTCATTTCTCTGCTGCTAGCCAATTTCATGAGTATATGAAATCAAAGAATGCTGCTAGTCTTCCTAAGTCAGATTTAAAGAGGTACTTAGATGATCCTGTTGAGGATATTCCTGCAAAAAGTTTCAATCTACTTCAGTGGTGGAGGATGAATGAATTAAAGTATCCAATTGTGGCAAAGTTGGCCAAGGATATTCTTACTATTCCCATCACCTCAGTCTCATCTGAATCAGCTTTCAGCACAGGGGGTCAAGTGATTAGTGATTATCGCAGCTCTTTACTCCCATCAACAGTACAAGCTTTGGTGTGTACATCTAGTTGGATTAGAGGAGGCCACCACAAAAGCACATATTTAGTAAGTTCTTATATTTTCATGTTTCTAACCAATTAATAGAGATACACAATCTAATAATCTATGTTTACTTGTTTGTTGCATACTAGGAGGATGATACTAATTCTATTATCCTTGTCCCAACTCAAGCTTCAACTGCAAATTCGGTTGTGGGCAGCAATTAGACTCGTTTGTCAGGTATATGTTTGAGGTTATATAAATTATCTATTGCTACCATATCAATTCCTCATCATTGATGAAACATTACCTATAATCT

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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