Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: DG_FS32_DEL0511330

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Chr05

15861660

15864628

SV Length:

Query Start:

Query End:

Allele sv Count:

2987 bp

7223625

7226611

24 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
DG_125619_DEL0513820	Chr05	15861660	15864628	7159013	7161996	2984
DG_125827_DEL0511300	Chr05	15861660	15864628	7284938	7287924	2987
DG_127518_DEL0513200	Chr05	15861660	15864628	7378610	7381596	2987
DG_127652_DEL0529250	Chr05	15861660	15864628	7328676	7331661	2986
DG_132424_DEL0513330	Chr05	15861660	15864628	7309560	7312546	2987
DG_CN1_DEL0509890	Chr05	15861660	15864628	7301195	7304181	2987
DG_FH838_DEL0514830	Chr05	15861660	15864628	7542818	7545804	2987
DG_FS32_DEL0511330	Chr05	15861660	15864628	7223625	7226611	2987
DG_G46_DEL0510810	Chr05	15861660	15864628	7242723	7245709	2987
DG_G630_DEL0517390	Chr05	15861660	15864628	7316664	7319649	2986
DG_HZ_DEL0511760	Chr05	15861660	15864628	7461843	7464829	2987
DG_J4155_DEL0512450	Chr05	15861660	15864628	7395302	7398288	2987
DG_J4155S_DEL0512670	Chr05	15861660	15864628	7503235	7506221	2987
DG_LK638S_DEL0510700	Chr05	15861660	15864628	7361134	7364120	2987
DG_R498_DEL0510700	Chr05	15861660	15864628	7626275	7629261	2987
DG_R527_DEL0511230	Chr05	15861660	15864628	6122750	6125736	2987
DG_R9311_DEL0511620	Chr05	15861660	15864628	7253892	7256878	2987
DG_S548_DEL0512850	Chr05	15861660	15864628	7379686	7382672	2987
DG_Tumba_DEL0512560	Chr05	15861660	15864628	7616784	7619769	2986
DG_XL628S_DEL0510540	Chr05	15861660	15864628	7351314	7354300	2987
DG_Y3551_DEL0511730	Chr05	15861660	15864628	7388933	7391919	2987
DG_YX1_DEL0510960	Chr05	15861660	15864628	7496118	7499104	2987
DG_ZS97RS3_DEL0510920	Chr05	15861660	15864628	7306331	7309317	2987
DG_MH63RS3_DEL0513810	Chr05	15861660	15864628	7462861	7465847	2987

>DG_FS32_DEL0511330
CTGTCACGCCCGGAATTTCTATCCAAAATTCCAAACGCTTACATGTGTGTGAACCCTCGTCCAGGAATCAGCCGAGGCACACAATAACAAATTGATAATAGAGTACAATTATTACTCTAATTAATAAGCGTATAAAATGTCATTACAGAGGTAGATAGTTCCTCTCAATCAATAAAGATCTAAGCAGCGGAAAATAAAATAAACGGCGCAAACGGCTCCACTCCATAGGCAGTTTGACCAGGGCTACACCTAATCCTCCACACCATCAGCTTCACTGTAGAACTCTTCCTCTGATGAATGATTGCAAGGTGAGTATATGATATACTCAGCAAGCCACGCAGCAAATATGCAAGTGCACAGGATAACAAAGGATGGCATAGTAGGGTTTCATTTGCAAAAGCAGCATTTAGCAAACATTTGAGAATTTAATAAAATAGTTAAGTAATTAAACAATATTAATCCAACGCTATACAACATACCCTGTTGTATAGGCCCAACCATTCTGAACAACCATCCCGGCTGCACAGTTCTATCTCCAAACCAGGAATATACCATTCCAAACCAGGAGCTAATCAAATTATTACCAATTAAAGCACCTTTTATTATGATGAGAAGGGTGAGACCAATCACGAAAGACATTGTTAGACCCGCCCATAACCGCGGGCACGGCTATTCGAATAGTTTTACTCTGATCAGAGGTGTACCACTGTACCCACAAGACACAACCCCACATCATGTCACCATGTGCCTCAATACCACCACGGTACCTCGGAAAGGAGTTGTGACAATACCCCTTGCATAACACAATCCACTGCAGCGCACCTTCCTGGATCATAATCACCCCCTTATAAACAAGGCATGGACTCCCCAGCGACCCCCGTGGGCTTATCTCCGCCACTTCTCAGTCTGGTGCCCCGCAATGAACCATGCTATACAAAAGATAAAGCCGTTGCCCACGCTGGCTTGTGGTTGGCACGGTTAATGTTTCACAACCGAAACTCGTGAACCGGTCCTTAATTGTCATGAGCACAACCATCAAAACCATGTGCTCACAACCCACCATTACCAGGTTTTAGTTGGCAAATAATTAATTAACAAATCACGATTGGCCATCGTGAACTATCATTAAGCCATCATTAAATTATAGTGATTCATAAGTTATCCCAATAGTGTGCTAATGTTTCTAAGCAGGGCTAAGCAATTATATCTAATACATCTAGTTGAACCAACATATAGAGCTCAACTAGTCAAGTTATAATAACCCAAGGTATCAAGGAATAAGGTAATCAAGAACAAAAGGGCTATAACAAACAATAGGTTAATTCCACCCAATGACATTCGAAAATAAATGCAATAGTTGAAAAGAAACAATAGCTTTAAATAGGATCAACATGCTCAAAGGGTTGTTTGGGATCTGTGTGACTTGCCTTGCTGGCCTTGGAACTCTTCAAACTCTTCTCCGGCGAAAACGGACTCTCCGGAAACGACGGAATCTAAGCAGAAAGAAGCAAAATCACCAAAACAGCACATAAACAAGCATGAACAGTACATGTGGATATTTTTAACATGTAGATCTCAATTTTAGAAAAATTTAGAGACTTAAACCAACTAAATCGGAGCTAAGATGAATTAGTTATGAATTTTTAAAAGATTAAATCGGATTAAAACACTTAAATTGATTTTGATTGAATTATGACGCAATAATGAATTATTTTTGAAAAGGAAAAGAGGATTTATTGCGTCAGCGGCTAGGGTTTCGGTGGACCGGACGCACGGGCGACGGCTCACGCGAACGGACGGCCGAGATCGACTTGATCCAAAACGGACGGCCGAGATCGAACGGTCCACGACCGGCTCACAGCGAACGGCCCCGATGACGTCGGCGATGACGTCACCACCGGCGGCGGCGGCTCGGGCTTGCATGCTCGCCGGCGAACGACGGCACGGCGGCGCGAACGGAAGGCACCAACAGGTAGAGCGCAATGCGGCGAACTCACCGGTGACCAAAAGAGCGGCGGAAGATCAACAGACGGCGACGGCGACGAGGAGGAAGCGGCGGCAAACTTCGGGTCGACGGCGGCGACGGTGCTCCGGCGGTCTTCGGCGGCGGCGAAGGAGCGGACGAGAACGGCGGCAACTTGGCGATCACGACGGTGGCCTTGCCGAGCGATGATGACGACCGAGACGGCGGCGGCGCACGGCTGGAGCGACGGCTACGACGGCGGCGCTAGGTTGCACGGCGCTAGAACTCTTCCGGCGACGAGAGGCGAAGGCGAAGGTGGCGACGGGTAGAGGAGACACCGGGGAACCTTTTAAAGGGGCTCGGAGGCGACGGCGAAGGCCCACGGCGACTGGCGACGAGAAGGAAGGTTTAGGGTTCGGAGGAGAGAGACGAATCCGATTCGAACTCGATTCCAACGATTTCCAAAACGAATTAGCCGATGTTTCCAAAAGAGAAAAGGTAGAGGAAATCCCGGAGATTGTTTCCCCTCTATCAATTCGGCCGGAAACGGAAAGGATCGATCGAATTTGGAAGGGAACGGCGGCGGCGCGAAACTAGGGTTTCGGGCGGCGGCGGCCGGAGATTGACGACGACCCTGACAGGTGGGCCCCACCTGTCAGCGGGCGGATGCGCGCGCGCGCGGCGGCGGACTGGGCCGGACTGGGCCGAGGAGAGAGAGAGAGCGGTTTTGGGCCGACTTTCGGCCCAAAGCCAAAAGAGACTTTTTAAAACCTTTTTCAATTTAAATTATTCATGAAATGCAATTCCATTTATTAAAAATACTTCCTTAGCTCAAATAAATCCCAGAAAAATCTAGGAATTATAGAATTAAGCAAAGTATTTAATGAAATTTTATCTGGCCCCATTTTATATTGGAATTTATTAATTAAAAAATTAGATCTTCTCTTCAAGACTTTTAAAATTATTTCTAAAAATTCCAATTAAACAACCATTTATATATTTTGAATTTTTAGGGTGTGACAAA