Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: D62_G630_DEL0125010

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Chr01

43030939

43031174

SV Length:

Query Start:

Query End:

Allele sv Count:

237 bp

38274017

38274253

13

Gene_id	Chromosome	Start	End
OsG630G0101406600.01	Chr01	38265821	38275423

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
D62_125827_DEL0135640	Chr01	43030939	43031174	38390604	38390840	237
D62_127518_DEL0132410	Chr01	43030939	43031174	38360544	38360780	237
D62_127742_DEL0119260	Chr01	43030939	43031174	37861026	37861262	237
D62_132424_DEL0130560	Chr01	43030939	43031174	37981632	37981868	237
D62_FH838_DEL0125580	Chr01	43030939	43031174	38351261	38351497	237
D62_G630_DEL0125010	Chr01	43030939	43031174	38274017	38274253	237
D62_IR64_DEL0139660	Chr01	43030939	43031174	37907637	37907873	237
D62_J4155_DEL0132000	Chr01	43030939	43031174	38145236	38145472	237
D62_Lemont_DEL0151860	Chr01	43030939	43031174	37755494	37755730	237
D62_R527_DEL0124400	Chr01	43030939	43031174	37929114	37929350	237
D62_Y3551_DEL0126400	Chr01	43030939	43031174	37968484	37968720	237
D62_Y58S_DEL0137730	Chr01	43030939	43031174	37082305	37082541	237
D62_MH63RS3_DEL0126460	Chr01	43030939	43031174	38545514	38545750	237

>D62_G630_DEL0125010
GTTCGGCTGAGAGCGTTCCCAGCGCGCACAGTAAACACGGAAAACGGAGCGGTCATTAGCGCGTGATTAATTAAGTATTAGCTAATTTTTTTTAAAAAAATGGATTAATTTGATTTTTTTTAAACAACTTTTGTATAGAAACTTTTTGCAAAAAAATGCACCGTGTAGTAGTTTGAAAAGCGTGCGCGGACGAAAAGTTACTGTGCACGCCGGGAAAACAGCTGCCGAACACAGCCT