Variation ID: Azucena_Tumba_DEL1215140

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os GJ-trop1: Azucena | AzucenaRS1
Os XI-3: Tumba | Tumba
Chr12
7760929
7763643
SV Length:
Query Start:
Query End:
Allele sv Count:
2716 bp
9351334
9354049
28
Gene_id Chromosome Start End
OsTumbaG1226926000.01 Chr12 9339950 9381838
SV_id Chromosome ref_start ref_end query_start query_end length
Azucena_02428_DEL1204810 Chr12 7760929 7762641 4321549 4323259 1711
Azucena_117534_DEL1209340 Chr12 7760929 7763448 7730243 7732763 2521
Azucena_125619_DEL1213800 Chr12 7760929 7763643 8138791 8141504 2714
Azucena_127652_DEL1213140 Chr12 7760929 7763643 8247612 8250322 2711
Azucena_127742_DEL1214700 Chr12 7760929 7763643 8958998 8961713 2716
Azucena_Basmati1_DEL1207410 Chr12 7760929 7763448 7928954 7931470 2517
Azucena_DG_DEL1213540 Chr12 7760929 7761468 19975391 19975927 537
Azucena_DHX2_DEL1204540 Chr12 7760929 7762641 4349537 4351247 1711
Azucena_G46_DEL1214050 Chr12 7760929 7761468 19583923 19584463 541
Azucena_G8_DEL1214390 Chr12 7760929 7761468 19367972 19368508 537
Azucena_HZ_DEL1213970 Chr12 7760929 7761468 18347989 18348525 537
Azucena_II32_DEL1214200 Chr12 7760929 7763643 11005720 11008432 2713
Azucena_IR64_DEL1213890 Chr12 7760929 7762702 8824511 8826284 1774
Azucena_J4155_DEL1214000 Chr12 7760929 7762702 9100082 9101853 1772
Azucena_J4155S_DEL1214180 Chr12 7760929 7762702 9067279 9069053 1775
Azucena_Kosh_DEL1205870 Chr12 7760929 7763163 12810912 12813147 2236
Azucena_KY131_DEL1205220 Chr12 7760929 7762641 4172233 4173943 1711
Azucena_LK638S_DEL1213950 Chr12 7760929 7763643 15910387 15913101 2715
Azucena_Nipponbare_DEL1207080 Chr12 7760929 7762641 4285255 4286965 1711
Azucena_R527_DEL1213690 Chr12 7760929 7762702 8753880 8755653 1774
Azucena_R9311_DEL1214150 Chr12 7760929 7763643 9667650 9670356 2707
Azucena_S548_DEL1213790 Chr12 7760929 7762702 8982066 8983839 1774
Azucena_Tumba_DEL1215140 Chr12 7760929 7763643 9351334 9354049 2716
Azucena_XL628S_DEL1214110 Chr12 7760929 7761468 19550297 19550833 537
Azucena_Y58S_DEL1213940 Chr12 7760929 7762702 9061093 9062866 1774
Azucena_YX1_DEL1214430 Chr12 7760929 7761468 19166517 19167053 537
Azucena_ZH11_DEL1205280 Chr12 7760929 7762641 4249936 4251646 1711
Azucena_ZS97RS3_DEL1213570 Chr12 7760929 7761468 19661850 19662386 537

>Azucena_Tumba_DEL1215140
AAATTTTAGTGGAATTTTCAGAGCACAAATAATAATTAAGAAGAAATAAACAAAGTTAAAATGATTTTACAAAAAGAAAAACCCTAAAAAGTCTTTTTCCCCCCTTCCCCTCTTGGGCCGGCTCGGCCCACCTCCCTCCCTCTCTCTCCTCTCCCCCCCGGCCCATCCGGCCTCCTCCCCGCGCGTGCGTGCCGCTGACGGGCGGGCCCGCCCGCCACCCTCGCTGACGGGTGGGGCCCACCCGTCATCCCCTTCCTCCCGCCGCTCCCGCCGCCTCGCCCGTGCCCTAGCGCCGCCGCCGCCGCGAATCCCGCCGCTCCCGTCTGCCCCGCGTGCAATCAAGAGGGGGAATTACTCCCCGTGATTCCCTCCCTCTTTCCCCCCACTTTTCCCTCTCTCTCTCCCTCGGATTCGTTCGAAAACGTTTCCCCCTAAACCTCGCCGGCGCATCAATGGCGGCCGGATCTTCCGCGGCCGATTCCCCCTCATCCGGCCGCTCTCTCCCCCTCCCAACCCTATATAAACACTCCCCGTGCCTCCCTCCGCCGTTTCCGCCACTCGCCGCTCTCTCACTCCGCCGGAATCGAGCTCGCGCCGTCGCTCTCTCTCTCCGCCGTCGCCGCCGAGCTCCGGTCCGCCGCCGTCGTCGCCCCGGACCTTCTCCCGTTTCGGCGTCACCTCCTTCGGCTTCGCCGTAACCTCGCCGACCTCGTCCACCCCTCCGTTTCGCCCGCCGACCGCCGGAACGCCGCCGTCCCCGTCGACCCGAGCCGCGCCGCCGCCTTCCTCCGCTCCGGTCGCCGTTCCCGTCGTCGCCGTCGACCCGGGGTGAGCCGTGGACCGCCGTTTCGCTTCCCCCTTCCCTCCCCTCTCTCGGGCGCCGCTCCGCCGCGCCGGTGGTCGCCGGCGGCGACCATCGGGGCGCGGGTACGCCGCCTCCCGTCGGCTGTGCCGGCATGGCCGCCTTCGGGCGCGCCCCGCGGCTGCCATGTGGGGCCCGGCCGTCAGCCGCCCGCGCCCTCGGGTGCGGCTGACGCGTGGGACCCACGGCGCCGGCCGGCGTAAGCCGCGTGCACCCGGTCCACCGTGGACCGTGAGGCTGCCGCGTGGGCCCCACTCCCGTGGACCCGGTCCGCGCGCTCCTCCCCTCGGCTGACGCAATAAATCTGATTTTAAATTAAAATTTAAATGAAGAAATTCGCAAATATCCATTTAAAGAGCATATAAACTTCAAATGGCCATAACTTGGCCATTTGAACTCGGAATTGGACCGTTCAAGTCTCTAATTTTTCCTTAAGAAGTCAAGAACCCATTTTTGTGCTTTGTTTCTGCTTGTTATATGGAGTTTATTAGAGTATAAGCCTTTTCTTTTCCGTTGGTCGTGTAGACGCTGCAGCTTCGGAAGATCCGCTCTTTGTGGAGGTTGAAGCCGACGTTTGGGAAAGCGAGCAAGGCAAGTCACATCATCCTTGAACATATTGAATCCCAGTTTATAAAATTATGTTGATTCAAATTATTGCATTATCGCTTTATTTAAATTCCCGCGTTATCACTGTTTTATCTAGCCATGCCTATTTACCTTTGTTATGACCTTATTATTATTGTTATTGTTATTATTACCTTGTTCACCCTAGAATAAACAAAACCCCAACTAGTGGACACTCTACTCATGGTATCACTAGTATGATTTTAGGTAGATGCTTCGCTGTTTAATTAGGTAACATTAGGTGGTTTTTCAACTCTAGACTTTGGGAATATTCATATCACCTGGACACTATGGAATGGTTTGGTTATTGTGGAATTGGCTTCACACCGCTCCTTCTATTCAAAATCCCCAAAATGGTTTTAGGCTGGGCTCGGGGTGCATGGTTTTGATAGTAGCACCTCGGCCATATAAGGACCGGTCTTCGGGCCTCTGTTGCAAAGCACTACCGTACTTCCACATGTCTAGTGGGTAAGGCTTAGTTTGTGGCTCAGTCTAGTTATAAACAAAAGTACACGGATAGAGATGGAAGAAGTCGGGGGTCGATGGACATCTCTAGGACAAATGAAGGCTACACGAGCTGCGGCCCGGTAGTCGAGATGTCATGGCACAGGGCCGGTGTCCTGCTGCTAGGGGCTCAGTCCTGCCTGCCTGTCCCGGGGGTTCCGGCCGTAGGTGGGATTGGGTCGGTACTCTTGTCTATGGCTAGGATGGGTTGGAAACTATGTCACGTCTTCCGTCTGTATACCGTGGTGGTATGTGGCACGTGGTTACACGTGAGGAAGATGTGTCCTGTGGGTAAAGATGTACACCTCTGATCAGAGTATAACCTATTCGAATAGCCGCGCCCTCGGTTATGGGCAAGCCGAGCAATGTACCCAAGTTAGTGTTTTAATTCTTAAAACCTGCTTAACAACTAAAATGTGGAATGGTTGGCCTGGGTTGGCTTGGGACGAGCTGGGACCCAGGGTCGGGTTGCCAGTTCGGTCTGAATCATCGTAGGCCTTGGGTTAAGGCAGGTTCGTGTGGGTTCACGGCCTTGATAAATAATATTGTATAGTTCTAGGATCGTGTTTACAAAATAGCTTTGAGCAACTAAATATCTTTAAATGCTGTTTACTGCAACCCTAACCCTGTATAGTATAACTCCTTTGTACTCCCTTGCATTTATTCTGCACTTGTGGGTGTGTCTTGTTGAGTACGGTGGTTGTACTCAGTCTTGCTCAATTTTTC

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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