Variation ID: 132278_127564_INS0449240

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
INS
Os GJ-subtrp: CHAO MEO | Os132278RS1
Os XI-3A: LIMA | Os127564RS1
Chr04
22613071
22617000
SV Length:
Query Start:
Query End:
Allele sv Count:
3880 bp
29157054
29160933
60
Gene_id Chromosome Start End
OsLima_04g0022000 Chr04 29152874 29161903
SV_id Chromosome ref_start ref_end query_start query_end length
132278_125619_INS0451530 Chr04 22613071 22617000 36347344 36351294 3951
132278_125827_INS0448380 Chr04 22613071 22613344 33752972 33753241 270
132278_125827_INS0448380_1 Chr04 22613071 22617000 29657890 29661768 3879
132278_127518_INS0453060 Chr04 22613071 22617000 28880930 28884809 3880
132278_127564_INS0449240 Chr04 22613071 22617000 29157054 29160933 3880
132278_127564_INS0449240_1 Chr04 22613071 22617000 36595519 36599471 3953
132278_127742_INS0448360 Chr04 22613071 22617000 28910757 28914655 3899
132278_127742_INS0448360_1 Chr04 22613071 22617000 36651429 36655379 3951
132278_132424_INS0454420 Chr04 22613071 22617000 29792907 29796805 3899
132278_132424_INS0454420_1 Chr04 22613071 22617000 37348875 37352825 3951
132278_CN1_INS0449010 Chr04 22613071 22617000 28308027 28311905 3879
132278_CN1_INS0449010_1 Chr04 22613071 22617000 36157127 36161077 3951
132278_D62_INS0449290 Chr04 22613071 22617000 28340582 28344462 3881
132278_D62_INS0449290_1 Chr04 22613071 22617000 35977540 35981489 3950
132278_DG_INS0451110 Chr04 22613071 22617000 28727461 28731339 3879
132278_DG_INS0451110_1 Chr04 22613071 22617000 36401994 36405944 3951
132278_FH838_INS0444880 Chr04 22613071 22617000 28797191 28801069 3879
132278_FH838_INS0444880_1 Chr04 22613071 22617000 36360980 36364930 3951
132278_FS32_INS0447290 Chr04 22613071 22617000 28420266 28424144 3879
132278_FS32_INS0447290_1 Chr04 22613071 22617000 35936465 35940415 3951
132278_G46_INS0448210 Chr04 22613071 22617000 27886940 27890818 3879
132278_G46_INS0448210_1 Chr04 22613071 22617000 35781542 35785491 3950
132278_G630_INS0444630 Chr04 22613071 22617000 28922502 28926380 3879
132278_G630_INS0444630_1 Chr04 22613071 22617000 36506112 36510062 3951
132278_G8_INS0449820 Chr04 22613071 22617000 28619971 28623867 3897
132278_G8_INS0449820_1 Chr04 22613071 22617000 36332839 36336789 3951
132278_HZ_INS0448230 Chr04 22613071 22617000 29082424 29086322 3899
132278_HZ_INS0448230_1 Chr04 22613071 22617000 36781794 36785744 3951
132278_II32_INS0448840 Chr04 22613071 22617000 28839351 28843229 3879
132278_II32_INS0448840_1 Chr04 22613071 22617000 36562118 36566068 3951
132278_IR64_INS0451020 Chr04 22613071 22617000 27268280 27272180 3901
132278_IR64_INS0451020_1 Chr04 22613071 22617000 31730445 31734363 3919
132278_IR64_INS0451020_2 Chr04 22613071 22617000 34934297 34938247 3951
132278_J4155_INS0427120 Chr04 22613071 22617000 34834223 34838172 3950
132278_J4155S_INS0426740 Chr04 22613071 22617000 35458920 35462872 3953
132278_LK638S_INS0449410 Chr04 22613071 22617000 28837617 28841498 3882
132278_LK638S_INS0449410_1 Chr04 22613071 22617000 36647822 36651776 3955
132278_R498_INS0447490 Chr04 22613071 22617000 27802941 27806839 3899
132278_R498_INS0447490_1 Chr04 22613071 22617000 35497799 35501749 3951
132278_R527_INS0447230 Chr04 22613071 22617000 28383602 28387500 3899
132278_R527_INS0447230_1 Chr04 22613071 22617000 36048984 36052934 3951
132278_R9311_INS0450960 Chr04 22613071 22617000 28991510 28995361 3852
132278_R9311_INS0450960_1 Chr04 22613071 22617000 36665546 36669491 3946
132278_S548_INS0446640 Chr04 22613071 22617000 27864659 27868557 3899
132278_S548_INS0446640_1 Chr04 22613071 22617000 35563473 35567423 3951
132278_TM_INS0445730 Chr04 22613071 22617000 27029296 27033174 3879
132278_TM_INS0445730_1 Chr04 22613071 22617000 34536493 34540443 3951
132278_Tumba_INS0448910 Chr04 22613071 22617000 29350371 29354248 3878
132278_WSSM_INS0449010 Chr04 22613071 22617000 28471679 28475577 3899
132278_WSSM_INS0449010_1 Chr04 22613071 22617000 36140268 36144219 3952
132278_XL628S_INS0449010 Chr04 22613071 22617000 28964745 28968641 3897
132278_XL628S_INS0449010_1 Chr04 22613071 22617000 36800963 36804913 3951
132278_Y3551_INS0446040 Chr04 22613071 22617000 29144065 29147944 3880
132278_Y3551_INS0446040_1 Chr04 22613071 22617000 36856485 36860435 3951
132278_Y58S_INS0448070 Chr04 22613071 22617000 36660589 36664539 3951
132278_YX1_INS0447710 Chr04 22613071 22617000 27366337 27370235 3899
132278_ZS97RS3_INS0448560 Chr04 22613071 22617000 29178690 29182568 3879
132278_ZS97RS3_INS0448560_1 Chr04 22613071 22617000 36903562 36907512 3951
132278_MH63RS3_INS0448510 Chr04 22613071 22617000 29403750 29407628 3879
132278_MH63RS3_INS0448510_1 Chr04 22613071 22617000 36975562 36979512 3951

>132278_127564_INS0449240
tgtagcgcccgttccgtcgtggcgcctagtgggaaaattatctcttaaaaaccctaattgcgaaatttgtttctttgcttgttgtctagtgtccatgccatctgaagatctcaaatccccgatatatcgtcgagttcaattccgaatctaaatccttccaaatcaaatccctccgcaaaagtctattttgcctcccccggggtcgatgggccgaatctctttcggcccatctccccctccctcccggcgctctctctctctctctctctctctcCCTCTCTCCCTTCCCCTCGCTCTGCCCGCGCGTGCGCGAGCGCCGCGCCGAGCGCCCCCTCCCCCTCGCTCTCCTTCTCCCCATCCCTGGCGAGCTCCCCGCCCGCGAAGCCGGCCCCCGCGCGCCGTTGTTCGCGCGCGCGCccgcgtggttgccacccgtgccgcgccgcctgcgccgtccgcgtcacccggccccgttgccctgccgcgcctgcagccgcttggccccgcagccagcgcgcgtgcccgagccgagccactcaatccgccgcgcctcccgttgcaagccgcgcgcgagagccgtggtggccgaccgcctggtcgccaccatcgtcagcgcctgcccgcgcctgtcgcccgtgtcaccgcctcgccgtcatcaccgtcgtcatcgcctcggccccgccactccgcgcgcaagccgccaagggacggaggcagagcccctcctccctctaccacgtcgcccccgctcccctcctccttttcccaaagaggcaaggggcgagccccctttctctccctcattttcccctttttccccccgccggcgtcatcctccctccgtcctgtcgccgatttggccgcgagcgccgagcgccagctcgcgccttgaccgcccaaagtcggtttccaaaccgacattgccgccctttaaacccaggcgccctcccttcctctttCcccccaatcctccccgtttctcgtccgcgccattgccgccacctcctgtgctctgtctcgcctccgccgttcatcgccaagcaccgggagagccggtgcgttcgttgacgcggaaggggactccgggcgctcgtcttcctcctcttccccggcccgaggccggagagatcactcccgcgccgtcggcctctcgtcacagcgccccgcctcatctcggtagtgcctccctccgttcttcctcctcgttccatcttCcccccCTTAGTTTTCGGTAGTAGCACGAGTAGCCTCCCCGTAGCTAGCCGGCGCCGCCCCGACCATTGCCGCTGCTCGCCGTGTGCCCGCCACCGTCGCCGCCCGTGCTTCGTAGCACCCGCTCGTCGCCGGCCTCGCTCGGCGTAGCTCCGCCTAATCTGACGCTAGCAACGAATTCCCGTAGCCGCGTAGATGCTCTCACCGCCGGGAATTGGCCCCTCGTGACCTCGTCGCCGTTTCCCCCTTTTCCCTCCGCCGGGCGCCGCTGCCGCAATCCGCCGCCGACGGACTCCCTCCGGCGAATCCAAGCCGTTGGCTCGCTCCCTCTCATTCTCCCTCGTCATCCCGGTGTACGCCCCGTCGCCCCTCATCGTCGCAAGGCGTCCCGGAGAAACCACCGCCGCCCGCCGTCCATTCGCGGCCGGCACCTTCGTCTTCCTCCCGCCAGCCCGCGTGGCAGCCACGTAGGCGCCACGTCGGCGCCAGCTCGGCCGAGATCGGATCGGGCCGACCCCGGTCAGCCCCTCCCGTGCGCGCGTTCCACCGCGAGCCGTGAGGCTACGTGTGGGCCCACCGCATCCGTTCCACCGCGAACCACGCGCGTGCACCGCATCCCTTCCCCGCCCGTGCGCGTGCGCCGCGTGCTCGCTCAGCACGGTGAACCGTGTCACCGACAAGCGGGTCCTACCCGGGACCACGCGTGGTGAGCCCGGTCCACCGGCCCTccctctcctccccttccgcgcgcgcgcttgggctgccttgggccggtcggcccatttagctcggccggaccgctccgtttctctcgggccgcgccctagccgcccgaggaaaagtatattatccctccctcttttcttttctttttcaaaaaggatttaattaaatccttttcctttagaccaaaaatccaataatcttagaaattcaatatcttcccaaccgtaaatccgtttgactccgttccacttccaaaattcctcaaatctcgagatctatctaatggcacgcttagaggtcattaatagggctttattttcgccgtttgttgagttgtcccgtttcgcgtgtagtttcggagcccgaagacccgcagtgcgaggattttgaggatcaagctccagatttcgagcaaggcaagccacctttgaacatcttgagcctatatttgaatttaattatattgcttgaaaaatattatgcattgataggatcgcacttaatctgtttgtcccgtctgcaaggcagattggcggacctacctagtttgttgcatttgatccttcctttgttaattgttataccatgttcccttgtaaccacccagttgcgcctcgggaatcgtgcactctgtgcgagtaccgacggtcgccttcaaacttcaaatctgagtaacaacttgggttttacaaaagacttggaaaacccgacacctgggtcggtgcttgcgaactaaatgaatttccaaaaccgcggaccggggaacgtaccgggtgtacggttttcccgctcttgcacctaaggaccgtttccttagaatttcatccaaacataagacaagtacgaccacatgggtggaatgggacacccctggctgagtaactagcttatcaggggagccttgatgccgagagacatgtggattcgccggggtggtgtcggggaggacccctgggcttcctggcacagtatggtctgggacctaacctgttgttggtctgggacccctctcgtcggcatatggtaaacctgtgtcggctttggaaatgccttgtcatgaaagcttggaggtctcccgacgtggctgatccccacgggctgggtgatccgggttagtaatgtcgtgtgggtaaagtgtatcccctctgcagaggttaacaaactgttcgaacagccgtgcccacggtcatgggcggatgtgaggtgattcctagcgtagttttgtttgactactgcttgtgaaattgctgttgtggaaaggggttcgatgtttgaaaaatctgcagctgatgggatcagctaggcccgggtggccgtttgaaagttgttggcccgggtggccgtttgaaaagctgttggccgggtgccaaccttgattcaattctaaagactgatacattgcacatactccgaccggacaagacgcactgtcttatccgtgtcgtttgagaagcactcacttagttGttttcagaaaggagttcaaataaaatcaattgtaaaaacaacagacttttcttgaagcctgcattaaacacttatttcccatggcttgctgagtactcccgtactcacccttgctctatataaataatccccccagttgctgaagaagatgaagcggatcctgctgatgaggagttcttccaagagcaagccggctacgatgagtattagggtttcggcctagttcccaagtcgcgcctgtgttgtttggtccaagtcctggcttccgtttcccttttgtaatgcagttgtgagctcGggatctgtccgcagcccaacatgactgtacctctactctataataaagagacctctgttgctgtgataatccgtcttcctatgataacaacactattttctgggactggtatcgattaacaggttaatttggagcgtcacgggctagtttcggtcggtactagtccggggcgtgaca

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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