Variation ID: 128077_IR64_INS1200470

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
INS
Os GJ-trop2: KETAN NANGKA | Os128077RS1
Os XI-1B1: IR 64 | OsIR64RS1
Chr12
425227
427715
SV Length:
Query Start:
Query End:
Allele sv Count:
2491 bp
5735183
5737673
55
There is no gene in this region.
SV_id Chromosome ref_start ref_end query_start query_end length
128077_117425_INS1200120 Chr12 425227 428665 7789249 7792691 3443
128077_117425_INS1200120_1 Chr12 425227 428665 7802950 7806381 3432
128077_125827_INS1200590 Chr12 425227 427715 5741833 5744323 2491
128077_127518_INS1200500 Chr12 425227 427715 5880764 5883254 2491
128077_127742_INS1200500 Chr12 425227 427715 5773984 5776474 2491
128077_127742_INS1200500_1 Chr12 425227 428665 7663995 7667438 3444
128077_127742_INS1200500_2 Chr12 425227 428665 7677654 7681086 3433
128077_132424_INS1200490 Chr12 425227 427715 5736889 5739379 2491
128077_Basmati1_INS1200160 Chr12 425227 428665 7667257 7670689 3433
128077_D62_INS1200480 Chr12 425227 427715 5841904 5844394 2491
128077_DG_INS1200550 Chr12 425227 427715 5705887 5708377 2491
128077_DG_INS1200550_1 Chr12 425227 428665 7677735 7681178 3444
128077_FH838_INS1200480 Chr12 425227 428665 5547567 5551006 3440
128077_FS32_INS1200510 Chr12 425227 427715 5767082 5769572 2491
128077_G46_INS1200560 Chr12 425227 428665 7545231 7548674 3444
128077_G630_INS1200370 Chr12 425227 427715 5777435 5779925 2491
128077_G8_INS1200540 Chr12 425227 428665 7771296 7774739 3444
128077_G8_INS1200540_1 Chr12 425227 428665 7784950 7788382 3433
128077_HZ_INS1200520 Chr12 425227 427715 5759722 5762212 2491
128077_HZ_INS1200520_1 Chr12 425227 428665 7654108 7657551 3444
128077_HZ_INS1200520_2 Chr12 425227 428665 7667765 7671197 3433
128077_II32_INS1200550 Chr12 425227 427715 5762951 5765441 2491
128077_II32_INS1200550_1 Chr12 425227 428665 7651614 7655049 3436
128077_II32_INS1200550_2 Chr12 425227 428665 7665258 7668688 3431
128077_IR64_INS1200470 Chr12 425227 427715 5735183 5737673 2491
128077_IR64_INS1200470_1 Chr12 425227 428665 7629540 7632983 3444
128077_IR64_INS1200470_2 Chr12 425227 428665 7643197 7646629 3433
128077_J4155_INS1200520 Chr12 425227 427715 5906175 5908665 2491
128077_J4155S_INS1200540 Chr12 425227 427715 5907069 5909559 2491
128077_LK638S_INS1200540 Chr12 425227 428665 5600427 5603866 3440
128077_LK638S_INS1200540_1 Chr12 425227 428665 7524829 7528272 3444
128077_Nipponbare_INS1200170 Chr12 425227 428665 6112720 6116159 3440
128077_Nipponbare_INS1200170_1 Chr12 425227 428665 6277756 6281202 3447
128077_R498_INS1200530 Chr12 425227 428665 5562526 5565965 3440
128077_R527_INS1200490 Chr12 425227 427715 5708199 5710689 2491
128077_R527_INS1200490_1 Chr12 425227 428665 7546209 7549652 3444
128077_R527_INS1200490_2 Chr12 425227 428665 7559864 7563296 3433
128077_R9311_INS1200490 Chr12 425227 427715 5864163 5866653 2491
128077_R9311_INS1200490_1 Chr12 425227 428665 7753098 7756541 3444
128077_R9311_INS1200490_2 Chr12 425227 428665 7766756 7770188 3433
128077_S548_INS1200500 Chr12 425227 427715 5707575 5710065 2491
128077_S548_INS1200500_1 Chr12 425227 428665 7774389 7777832 3444
128077_S548_INS1200500_2 Chr12 425227 428665 7788044 7791476 3433
128077_Tumba_INS1200530 Chr12 425227 428665 7794439 7797871 3433
128077_WSSM_INS1200600 Chr12 425227 427719 5694034 5696528 2495
128077_XL628S_INS1200540 Chr12 425227 428665 5592483 5595922 3440
128077_XL628S_INS1200540_1 Chr12 425227 428665 7516811 7520254 3444
128077_Y3551_INS1200470 Chr12 425227 428665 5547890 5551329 3440
128077_Y58S_INS1200500 Chr12 425227 427715 5901648 5904138 2491
128077_YX1_INS1200530 Chr12 425227 427715 6398009 6400499 2491
128077_YX1_INS1200530_1 Chr12 425227 428665 8227580 8231023 3444
128077_YX1_INS1200530_2 Chr12 425227 428665 8241277 8244709 3433
128077_ZS97RS3_INS1200540 Chr12 425227 428665 5569799 5573238 3440
128077_ZS97RS3_INS1200540_1 Chr12 425227 428665 7494147 7497590 3444
128077_MH63RS3_INS1200470 Chr12 425227 428665 5551132 5554571 3440

>128077_IR64_INS1200470
AGAATGATGCGTTGGCACGCTAAAGAAAGTCAACAGGACGGGATGCTGAGACACCCTGCAGATGGTTCGCAGTGGCGAAACATCGACAGAAAATTTAAAGACTTTGGAAAGGACGCACGAAACATACGGTTTGGTTTAAGTACGGATGGCATGAATCCTTTTGGAGAGATGAGCAGCGGCCATAGCACTTGGCCCGTTACGATGTGTATCTACAACCTCCCCCCTTGGCTATGCATGTAGAGGAAGTACATAATGATGCCAATTATTTTTCAAGGGCCCAAGCTATCTGGTAACGACATCGATGTGTTCCTAAGACCACTGGTCAAAGATCATAAACTGTGGTAGAAGAAGGAAGGTGTCCCCGTGTGGGACGAAGACAAACAAGAGGAGTTTAACCTACGAGAGCTGTTGTTCGTAACCATCAACGATTGGCCTGCACTTAGCAACCTATCCGGGCAGTCCAACAAGGGGTACAAGGCTTGCACTCACTGTATGGATGAAACAAAAAGTACGTATCTTAAGCACTGTAGGAAGGTTGTGTACATGGGTCATCATCGATTTCTTGCTGCAAACCACCTAGTACGGAATAAAGGCAAGCACTTTGAACATAAGGCAGACCACCGTACGAAGCCTAAACATCGCAGCGGGAAAATAGTGTTTGCTATGGTGAAAGATCTTAAAGTAGTGTTTGGAAAGGGGCCTGGCAGCCAGCCTATAGAGAGCGAAGATGGTCACGCGGCGATGTGGAAAAAAAAAACTCCATATTTTGGGAGTTACCCTATTCAGAATCCTTGGACGTCCGCCACGCAATCGACGTGATGCACCTCACTAAGAACCTTTGCGTAAACCTTCTTGGCTTCCTAGGTGTATATGGAAAGTCGAAAGATACACTGGAAGCACGTAATGATCTGAAGCATATGGAACAACGCGGTGACCTTCACCCGGAACCAAAGGAGAAAGGCAGCCATTACTTGAGTCCAGCCAGCTACACTCTTAGCAAGGCAGAGAAGGAAAGTATGTTTCAATGCTTGGAGAGCATCAAGGTACCATCTGGATACTCCACGAATATAAAGCGAATAATAAGCACGAAGGAGACGAAGTTCACAAACCTAAAGTCTCATGACTGTCACGTGTTGATGACACAACTGCTACCAGTTATAATAAGGGGTATCCTCGCAGACAATGTCCGGGCAACAATAACAAAGCTATGTTCTTTCATGAACGCAATTTCGCAGAAGGTCATCGATCCGGATAGGTTAGAAGCCCTTCAGAATGATGTGGTGCAATGTCTTGTCAGCTTTGAGTTGATATTTTCACCTTCATTTTTCAATATAATGACGCATCTGCTCCTGCACTTAGTCAAAGAGATCGGTATTCTCGGGCCTGTGTTCCTACACAACATGTTTCCTTTCGTGAGGTACATGGGCGTTCCGAAGAAGTATGTTCGTAACCGTGCTCGTCCAGAGGCAAGCATCGTCAAGGGGTATGGAACAGAGGAGGTCATTGAATTTTGCGTAGAATTTATTGAAGACCTTCGCCCAATCGAGATACCTGAATCACGCCATGAAGGGAGACTACGGGGAAAGTGGACTCTCGGAAGGAAAGCAATAATGACGGTAGACAACAATTTATTCCGTAAAGCCCATTTCACAGTTTTACAAAAATCTTCATTGGTGGCTCCTTACATCGAGGAGCACTTGGCTCTAGTTCGCGCCAGAAACATAGGTAAGTCCGATGCATGGATTACACGGCATCACATTGATACTTTCCCCGCATGGCTGCGACAACATCTCATGGGTAACGAGACGATTAACCAGCAACTGGCCTTCCTGGCGAGGGGTCCATCTGGTTCGATCACGACATTCTAGGGATATGAGATCAATGGGTACACATTCTACATAAGAGCCCAAGATATGAAGAGCACGAATCAGAATAGTGTTGTTCGTATCGATGCCATGGGACATGATGGTACAACTGGCACGTATTACGGTGCCATCGAGGAGATATGGGAACTTGACTATGGACCTCTCAAGGTCCCTCTGTTCCGGTGCCAATAGGTTAGGTTGACTGGTGGAGACGTAACGATTGATGACAGTGGGATGACAACGGTTGACCTTAACAAGGTTGGATACTCGGACGAACCTTTTGTCCTTGCCAATGATGTAACGCAAGTTTTTTACATGAAGGACATGTCTAGCAAAGGAAAGAGGGGCAAAGGGCCTGACGAGCCGAAGCGCCACGTGGTTCTCCCAGGCAAAAGAAAAATCGTCGGAGTAGAGGACAAGGCTGACGAGGATTACGATCAGTTTGATGGGCAACCCCCTTTCACGGTGACGATTGACCCTAGCATCGTCCTATCAAATGAAGACACCCCTTACTCACGTAGCGATCACAAGGAAGGAACAATAGTGAGGAGAAAGTACGTGCGGACAACCGTTACCGCCGATGTATTGCCGTGATTGTCGTAAACTATTTTGGATGTATTGAATAT

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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