Variation ID: 127652_R498_DEL0426660

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os cA2: NATEL BORO | Os127652RS1
Os XI-1B: R498 | R498
Chr04
12988066
12990025
SV Length:
Query Start:
Query End:
Allele sv Count:
1938 bp
27806917
27808854
39
Gene_id Chromosome Start End
OsR498G0409044900.01 Chr04 27807312 27807963
SV_id Chromosome ref_start ref_end query_start query_end length
127652_02428_DEL0435030 Chr04 12988066 12989979 28075461 28077367 1907
127652_117425_DEL0430280 Chr04 12988066 12989979 26494687 26496593 1907
127652_125619_DEL0429600 Chr04 12988066 12989979 28681137 28683043 1907
127652_125827_DEL0423900 Chr04 12988066 12990025 29661846 29663796 1951
127652_127518_DEL0427120 Chr04 12988066 12990025 28884887 28886837 1951
127652_127564_DEL0425100 Chr04 12988066 12990025 29161011 29162961 1951
127652_127742_DEL0422070 Chr04 12988066 12990025 28914733 28916670 1938
127652_128077_DEL0434040 Chr04 12988066 12989979 26354606 26356512 1907
127652_132278_DEL0435420 Chr04 12988066 12989979 27559521 27561427 1907
127652_Azucena_DEL0434230 Chr04 12988066 12989979 26276915 26278821 1907
127652_Basmati1_DEL0430970 Chr04 12988066 12989979 26044443 26046349 1907
127652_CN1_DEL0427220 Chr04 12988066 12990025 28311983 28313933 1951
127652_D62_DEL0424720 Chr04 12988066 12990025 28344540 28346490 1951
127652_DHX2_DEL0434840 Chr04 12988066 12989979 26947672 26949578 1907
127652_G630_DEL0425540 Chr04 12988066 12990025 28926458 28928408 1951
127652_G8_DEL0427290 Chr04 12988066 12990025 28623945 28625882 1938
127652_HZ_DEL0422150 Chr04 12988066 12990025 29086400 29088337 1938
127652_IR64_DEL0426260 Chr04 12988066 12990025 27272258 27274195 1938
127652_J4155_DEL0433460 Chr04 12988066 12989979 27223923 27225829 1907
127652_J4155S_DEL0435130 Chr04 12988066 12989979 27791828 27793734 1907
127652_Kosh_DEL0435750 Chr04 12988066 12989979 27744207 27746113 1907
127652_KY131_DEL0435980 Chr04 12988066 12989979 28172783 28174689 1907
127652_Lemont_DEL0433280 Chr04 12988066 12989979 27076944 27078850 1907
127652_LJ_DEL0433740 Chr04 12988066 12989979 27075455 27077361 1907
127652_NamRoo_DEL0436390 Chr04 12988066 12989979 28031648 28033554 1907
127652_Nipponbare_DEL0435280 Chr04 12988066 12989979 27686717 27688623 1907
127652_R498_DEL0426660 Chr04 12988066 12990025 27806917 27808854 1938
127652_R527_DEL0428430 Chr04 12988066 12990025 28387578 28389515 1938
127652_R9311_DEL0422050 Chr04 12988066 12990025 28995439 28997376 1938
127652_S548_DEL0428590 Chr04 12988066 12990025 27868635 27870572 1938
127652_TM_DEL0426900 Chr04 12988066 12990025 27033252 27035202 1951
127652_Tumba_DEL0426630 Chr04 12988066 12990025 29354326 29356276 1951
127652_WSSM_DEL0421940 Chr04 12988066 12990025 28475655 28477592 1938
127652_Y3551_DEL0429330 Chr04 12988066 12990025 29148022 29149972 1951
127652_Y58S_DEL0423970 Chr04 12988066 12989979 28882633 28884539 1907
127652_YX1_DEL0426300 Chr04 12988066 12990025 27370313 27372250 1938
127652_ZH11_DEL0435510 Chr04 12988066 12989979 27233580 27235486 1907
127652_OglaRS2_DEL0441160 Chr04 12988066 12990025 24355235 24357160 1926
127652_MH63RS3_DEL0429250 Chr04 12988066 12990025 29407706 29409656 1951

>127652_R498_DEL0426660
CAAGGTCCAAGTGTACTGCTTCGAGGTCCTTTTATTCAATCAGTGCTTTTCGAGTTTTATGATTTATTCATGACAATACCAGCATGGACAACGTTCCGAGGGGAAAACCAGTCATTTTGATTTCTGACAGTGAAGATGGTAAACCAAATTCTTTTTCCTACTTATTCATGTCCTTTCTTCTTTGTTTCGAACTAAAATGGTGCTTACAAACCAAAAACACGGGAAATATTATTGTAGATGATGATGAAGTTGCTAAGATATATCAAAGCGTGCGCAAGTGCTCCATTGAAAGAGGTGATTATTTTCATATAAATAATTAATAAGTCCAAATGTACAGAATGTTAGGTACTGCTAGTCAGATGATGTGCATGTCAAACTTCCAATTTCAGGTCAATATGGACCTCGCACCTTCCCTGGATTTGATAGGTAGTACTGGTATGGGACTGAACATGCAGTACAAAATTGCTCACATTGCTATAAGCAATTTGCCTACCATTCCACTCTATGTGTATGAGATCCAGATGACTAATTTGACAAAAGGGAAAATGGTATGGTTCACAAATCTGACTGCCCTGTATTTGCATTTGTTTATACATAAATGTCCTGAGTCTAAATGTCTTGTTTATAATTTTTAGGCCTTCAGTTTGCCATTTAGCAAGCAGTACATAAACAACCACCTTTCAACACCAATTGATGATTTACTTGTGACTCTGGTTGGATCAGCTGAATCCTTTGAGATGAGACTGAAGAAATCCAAAGATAAGCGGGCTACCTTTACAACTAGATGGAACAAGTTGGTTCAAGCCAATTTATTCGAGCTTGGTGATGTTTGTGTGTTTCTGTTCACTGAAGTTGATGATGACCTATGTATTACTCTTGAGGTTCTCAACTAGTGTAATGGATGAAGAACTTTGATGTGCCCCCTCATAATGTAGTAGTATGCCCCCTCCTAGTGTAGTATCTGCACCTTATGTAATGGATACTATGCAGCAGCTTTTGTTCAACTTTAATGGAGGCCATGCAGCAGCTTATGTTCTAAGTTAAGACTGTTATTCTGATGTAATATATTTATCATCTATTTCCCTAAAATTACCTAGTTGTTTGCATCACTTCAAATCTAATATGGCAAGTGTACAGTTTTTATGCTACTGGAGTTGTTGATTGTTGTTGGAATCACTGCTACAAAATTAAAATGGCTGCCCGTTCTGTTCTGAAAACTAAAAACATGCTACGGAAGCTTCATCTTGATTGTTGCTGGAATACTATACTTAATTGGGCTGAAAACACACAGAACAGAAGCAGCTGGCATGAATACAAATGAGTTTAAGAAACTTTAGTTGGCTGGAATACAAATGTAAGGTGCACACACAAGAGCGTCGGACGATGCAGGAACAACAGAGACCACAACAGCAGGAAGCGACGCCCGAGTATTCCGGCTGGATGCGACGGTGGATGCGGCAGGGTGGAGGCGGCGATTTTGATGCGCCTGGCGTCGTCGTGGATGAGTCGGTGCGCCTGCGGATGGCTGGATGAGACAACGAGTTCTTGCGACGGCGGGATGGATGCGCCGGGGTGGAGGCTGCCGCTGTATGCGACGACGGGATGCGCCGCTATTGACGACGGGATGCGGGTTGGACGTCTGCCGCGGCGTCCTCGACGGCGGCAGACGCGTGTTCGACGCGCGGCCGCGGTGGCGTCGAGGGTACGTCGGCCGCGGGGGAATACCTGCGATGAGACGGCGGCTGCGGCGGACAAGATGAGACGCCGGCAACAGATATTGGCGCTTGGCGGCCGCCGCAGACTATTGGCTGGGATGGGCGGTGATTAACGCTACCCTAATTTTGTTTAGCCCCATCATACCCTTCCTAAATCAACAGTACCTCATGGTACCTCGTACCTCATGGTACCTCCTCAAGAATAGAAAATATGCTCTCTGAA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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