Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 125827_IR64_DEL0437090

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Os XI-3B2: LIU XU | Os125827RS1

Os XI-1B1: IR 64 | OsIR64RS1

Chr04

33752958

33753241

SV Length:

Query Start:

Query End:

Allele sv Count:

286 bp

27268280

27268565

2

Gene_id	Chromosome	Start	End
OsIR64_04g0021500	Chr04	27264102	27273790

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
125827_IR64_DEL0437090	Chr04	33752958	33753241	27268280	27268565	286
125827_R9311_DEL0432670	Chr04	33752958	33753241	28991510	28991795	286

>125827_IR64_DEL0437090
TGTAGCGCCCGTTCCGTCGTGGCGCCTAGCGGGAAAATTATCTCTTAAAAACCCTAATTGCGAAATTTGTTTCTTTGCTTGTTGTCTAGTGTCCGTGCCATCTCAAGATCTCAAATCCCCGATATATCGTCGAGTTCAATTCCGAATCTAAATCCTTCCAAATCAAATCCCTCCGCAAAAGTCTATTTTGCCTCCCCCGGGGTCGATGGGCCGAATCTCTTTCGGCCCATCTCCCCCTCCCTCTCGGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTC