Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 125827_127518_DEL0300550

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Os XI-3B2: LIU XU | Os125827RS1

Os XI-3B1: KHAO YAI GUANG | Os127518RS1

Chr03

1830417

1833199

SV Length:

Query Start:

Query End:

Allele sv Count:

1293 bp

1850499

1851791

2

Gene_id	Chromosome	Start	End
OsKYG_03g0002510	Chr03	1840718	1854790

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
125827_127518_DEL0300550	Chr03	1830417	1833199	1850499	1851791	1293
125827_MH63RS3_DEL0300610	Chr03	1830417	1833200	1832104	1833396	1293

>125827_127518_DEL0300550
AAAGAGAGAAGCCAATTTTAAGTGGCATATAAGAGAGCCGGTTAATTTAGAGTGACATATAAGGGATTCTCTCTTCTCTTAACTATGCAAATTCCATTCAAATTTAGCCAAAATCCCCGAAATTTCGGTTGTATATATCGGTGCAAAGGACTAACTGCAGGCTGCGTCGTCGTCTTCCTCGCGATCGTTTTCACCTTTTTTTCAGGCCATCTGTACGTGAAGAGTGACGTGTACTGCTTCGGCGTGGTGCTGCTTGAGCTGCTCACGGGGCTGAGGGCTCACGACCTGAACCGGCCGAGCCACCAGCAGAATCTGGTGGAGTGGGCGCGGCCGTACATCGCCGGCGGCAAGAAGCTGGCGGGGCTGATGGACCCGCGGCTCGCCGGGGACTACCCGGCCAAGGCGGCGGCGCGGGCCGCCAAGCTCGCCGACAAGTGCCTCTGCGGCGACCCCAAGAGCCGGCCGTCCATGGACGACGTCGTCGTCGCGCTCCAGGAGATCGAGTCCGTCGGCACCGCGCGGCCGCCGGCGGCGAAGCTGCCGCCGCGGGCGCCGCCGCCCGCTGCGCACCGGTCGCCGCACCGTAATCCTTATTCCAAGCCGCGATGAGCTTTGGGATTATCTGCATACTAACATGGATTTGAAATTGAATTGAATTGGATTGTATTGATTCTTTTTTCTTTCTACGGCGCGTGTCATCTTTAAACAATCTCACTTTGCAAATGATTATACTCCTCTGATCCATGAGATTAGCCGTAGTGATGAACCGAATCGAGTCACTGTCCAGGAGAGCGACAAGATGACCCAGACCTGTGCTTTCAGGAGAAGCACATATACAGGATGTGATTTCTGAGATAAATGTGTAGACTTGAGGATAAACATACGACGGGTTTAGCTCTGAAACCATAACATGCCAGAATTTGTGTTTAGAGAATAGATGAAAAAACCAAAAAAACCACGGACGCCAACCGACAAGATCACTTTTAAGAGTTGATTACAAAAGCATAACAATTAGACGTTACTCCTGTGCGACTAGGAGATTAATTCAAATATATTTTCATACTGAAATTTGGGACACATATTTAACAACTATAAAAGGAAGAAAAAGAGTCACAAAGGGTGTGTTTAGTTCACGTCAAAATTGGAAGTTTAATTGGAATTGAAACGATGTGACGAAAAAGTTAGAAGTTTATGTATGTAGGAAAGTTTTGATGTGATAGAAAAGTTGGAAGTTTGAAGAAAAACCAGGCCAAAGTAGCACAATTCTTACATTTCTACCGTACTGTACATGAT