Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 125619_127518_INS0441750

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os XI-2B: LARHA MUGAD | Os125619RS1

Os XI-3B1: KHAO YAI GUANG | Os127518RS1

Chr04

33898451

33898750

SV Length:

Query Start:

Query End:

Allele sv Count:

303 bp

28880930

28881232

14

Gene_id	Chromosome	Start	End
OsKYG_04g0021830	Chr04	28876755	28885779

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
125619_127518_INS0441750	Chr04	33898451	33898750	28880930	28881232	303
125619_127564_INS0453480	Chr04	33898451	33898682	33816796	33817027	232
125619_127564_INS0453480_1	Chr04	33898451	33898750	29157054	29157356	303
125619_132424_INS0449700	Chr04	33898451	33898803	34821392	34821736	345
125619_FH838_INS0449640	Chr04	33898451	33898750	28797191	28797493	303
125619_FS32_INS0445260	Chr04	33898451	33898750	28420266	28420568	303
125619_G46_INS0441810	Chr04	33898451	33898750	27886940	27887242	303
125619_G630_INS0439970	Chr04	33898451	33898750	28922502	28922804	303
125619_LK638S_INS0443570	Chr04	33898451	33898750	28837617	28837919	303
125619_TM_INS0440270	Chr04	33898451	33898750	27029296	27029598	303
125619_Tumba_INS0454180	Chr04	33898451	33898750	29350371	29350673	303
125619_Y3551_INS0437630	Chr04	33898451	33898750	29144065	29144367	303
125619_Y3551_INS0437630_1	Chr04	33898451	33898850	1040274	1040683	410
125619_MH63RS3_INS0437680	Chr04	33898451	33898750	29403750	29404052	303

>125619_127518_INS0441750
TGTAGCGCCCGTTCCGTCGTGGCGCCTAGTGGGAAAATTATCTCTTAAAAACCCTAATTGCGAAATTTGTTTCTTTGCTTGTTGTCTAGTGTCCATGCCATCTGAAGATCTCAAATCCCCGATATATCGTCGAGTTCAATTCCGAATCTAAATCCTTCCAAATCAAATCCCTCCGCAAAAGTCTATTTTGCCTCCCCCGGGGTCGATGGGCCGAATCTCTTTCGGCCCATCTCCCCCTCCCTCCCGGCGCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTTCCCCTCGCTCTGCCCGC