Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 117534_IR64_INS1217840

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Chr12

9421413

9422175

SV Length:

Query Start:

Query End:

Allele sv Count:

763 bp

9032912

9033674

24

Gene_id	Chromosome	Start	End
OsIR64_12g0008760	Chr12	9031300	9039444

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
117534_125619_INS1218430	Chr12	9421413	9422175	9980350	9981111	762
117534_127518_INS1217680	Chr12	9421413	9422175	9360497	9361258	762
117534_127564_INS1218010	Chr12	9421413	9422175	9066779	9067541	763
117534_132424_INS1217340	Chr12	9421413	9422175	9105485	9106247	763
117534_Azucena_INS1215560	Chr12	9421413	9422175	9566794	9567555	762
117534_CN1_INS1218290	Chr12	9421413	9422175	9109435	9110197	763
117534_D62_INS1217600	Chr12	9421413	9422175	9217579	9218341	763
117534_DG_INS1218480	Chr12	9421413	9422175	9167702	9168463	762
117534_FS32_INS1217620	Chr12	9421413	9422175	9143532	9144294	763
117534_G46_INS1218630	Chr12	9421413	9422175	9034874	9035635	762
117534_G8_INS1217660	Chr12	9421413	9422175	9186083	9186845	763
117534_HZ_INS1218360	Chr12	9421413	9422175	9070322	9071084	763
117534_IR64_INS1217840	Chr12	9421413	9422175	9032912	9033674	763
117534_J4155_INS1218250	Chr12	9421413	9422175	9308179	9308941	763
117534_J4155S_INS1218470	Chr12	9421413	9422175	9275685	9276447	763
117534_LK638S_INS1218500	Chr12	9421413	9422175	9029226	9029987	762
117534_R498_INS1218260	Chr12	9421413	9422175	8669131	8669893	763
117534_R527_INS1217910	Chr12	9421413	9422175	8962231	8962993	763
117534_S548_INS1218060	Chr12	9421413	9422175	9190341	9191103	763
117534_TM_INS1216270	Chr12	9421413	9422175	9111788	9112550	763
117534_WSSM_INS1217620	Chr12	9421413	9422175	9010811	9011573	763
117534_XL628S_INS1218600	Chr12	9421413	9422175	9021071	9021832	762
117534_Y58S_INS1218630	Chr12	9421413	9422175	9269452	9270214	763
117534_ZS97RS3_INS1218230	Chr12	9421413	9422175	8984125	8984886	762

>117534_IR64_INS1217840
AATCCTCTGGATACATGCTTAGATACAACGGATATTTTTTCGGGGGATAAGGAAGATCATAATAACTGAGCATTAATATTTTCCTCACTCGAGCCTCTGAGTTTAGTGAAGCACCAACAGTATCATGCACTTGCACCCACTGGTCCTCTGAATCGGATTTGGTTGCTAGCAAGCTAGCTATGGAGATTATAGCTAATGGTAAACCACGACATTTCGATATGATGGCATGAGAGATGTCTTCCAGGTGAGGCGGGCAGCAATTCTCAGAATTAAAAGCTCTCCGGTAAAATAATCTCTGTGATTCTTGCTCTGCTAGTGGCTGCATGCTGTGAAGATAGCCTTCAGATGTGGTACGGCTACACGCTTTAGCTACGGCAGCGTTTCTTGTTGTTGTTATGATTATACTGCCCAAATTATTCTCTGGGAAAGCACAACTGACCACCTTCCACGCACCTATGTCCCAAATATCATCAACAACAATGAGGTACGTGAGTACAATTAAATTTATGATCCGGTCATCATACTTTCGCATCAATGTGGATGAATGATCATACATAAAAGCTAGTTACCACTCATGTAGCCATAGCTAAAAGACTGGTATTGATCGAAGTACAGATGTTTTTGTGGCTAGAATATTACAATTAAGAGTGCAAAGTGTTTTATTGGGTTTGTTCTAGTTCTAGATACAACGATATCTGTCTGTACGTTTCGGATTTGCTATATATCTTGCGACAGAAAATTGAAGTTGGAAACTTCTAAATTT