Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 117425_HZ_INS0106940

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os cB: ARC 10497 | Os117425RS1

Os XI-adm: Huazhan | HZ

Chr01

3820613

SV Length:

Query Start:

Query End:

Allele sv Count:

535 bp

3973037

3973571

29 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
117425_125619_INS0107250	Chr01	3820613	3820613	3948220	3948754	535
117425_127518_INS0106940	Chr01	3820613	3820613	3962533	3963067	535
117425_127564_INS0107100	Chr01	3820613	3820613	3877806	3878340	535
117425_127742_INS0107130	Chr01	3820613	3820613	3964052	3964586	535
117425_132424_INS0106210	Chr01	3820613	3820613	3897289	3897823	535
117425_Basmati1_INS0102570	Chr01	3820613	3820613	3913736	3914270	535
117425_D62_INS0106800	Chr01	3820613	3820613	3736873	3737407	535
117425_DG_INS0106810	Chr01	3820613	3820613	3730108	3730642	535
117425_FH838_INS0106730	Chr01	3820613	3820613	4231288	4231822	535
117425_FS32_INS0107040	Chr01	3820613	3820613	3879806	3880340	535
117425_G630_INS0106690	Chr01	3820613	3820613	3942339	3942873	535
117425_G8_INS0106920	Chr01	3820613	3820613	3966034	3966568	535
117425_HZ_INS0106940	Chr01	3820613	3820613	3973037	3973571	535
117425_II32_INS0106900	Chr01	3820613	3820613	3865892	3866426	535
117425_IR64_INS0106980	Chr01	3820613	3820613	3845676	3846210	535
117425_J4155_INS0105700	Chr01	3820613	3820613	3958666	3959200	535
117425_J4155S_INS0105640	Chr01	3820613	3820613	3971710	3972244	535
117425_LK638S_INS0105500	Chr01	3820613	3820613	4078992	4079526	535
117425_R527_INS0107240	Chr01	3820613	3820613	3957957	3958491	535
117425_R9311_INS0107430	Chr01	3820613	3820613	3958207	3958741	535
117425_S548_INS0106890	Chr01	3820613	3820613	3965902	3966436	535
117425_Tumba_INS0106910	Chr01	3820613	3820613	3872026	3872560	535
117425_WSSM_INS0106750	Chr01	3820613	3820613	3962184	3962718	535
117425_XL628S_INS0106720	Chr01	3820613	3820613	3861680	3862214	535
117425_Y3551_INS0106640	Chr01	3820613	3820613	3942328	3942862	535
117425_Y58S_INS0105680	Chr01	3820613	3820613	3959032	3959566	535
117425_YX1_INS0106980	Chr01	3820613	3820613	3866459	3866993	535
117425_ZS97RS3_INS0106800	Chr01	3820613	3820613	3876430	3876964	535
117425_MH63RS3_INS0106640	Chr01	3820613	3820613	3948257	3948791	535

>117425_HZ_INS0106940
GGCCTGTTTGGTTGGCAACCTGAGTGATGTGCCTAAGAAAACTACATGCCTAAGAGGCATTAGCTATCCTGTCAAAACTTGCCTGATGAGGCTAGCCTGAGCAAATGTTGTTTGGTTAGTAGCCTAAGCCTGAGGAAACTAAATTGAGATTAGATGGTTCATAATTACATGGTTAAGGTAGATATTATTTAAATAAAACGGTATCTTATATCCTAATCTATCGCATATAAGCAAATGTTGTATTTTCGGTTCGTTTGCACCAACCAAGATTCAACAATAAAATATTCCAACACCTTTTGCATGCACAGTCGTGGGCCCGTGACAGGACAAGCTTGATTAGCGCGTTTTGTTTTGTGTAACTAGACTGAGCCAGGCGCTCGTTTTTGGTGGCCTGAGCTAGGCTAATGAACCTATCAGGTTTTTCAGGTCAGGCAGAGAATGAAACCATCAGGCTACCAACCAAACGACACAGGATATCCCTCAGGGACATATCAGGCCAGGCTCTTTTGGCTCAGGGCTTCAACCAAACAGCCCC