Variation ID: 02428_127742_INS0450120

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
INS
Os GJ-temp: 02428 | 02428
Os XI-1B2: PR 106 | Os127742RS1
Chr04
23134593
23138525
SV Length:
Query Start:
Query End:
Allele sv Count:
3899 bp
28910757
28914655
59
Gene_id Chromosome Start End
OsPr106_04g0022670 Chr04 28906579 28916265
SV_id Chromosome ref_start ref_end query_start query_end length
02428_125619_INS0453230 Chr04 23134593 23138525 36347344 36351294 3951
02428_125827_INS0452150 Chr04 23134593 23138525 29657890 29661768 3879
02428_127518_INS0454960 Chr04 23134593 23138525 28880930 28884809 3880
02428_127564_INS0452050 Chr04 23134593 23138525 29157054 29160933 3880
02428_127564_INS0452050_1 Chr04 23134593 23138525 36595519 36599471 3953
02428_127742_INS0450120 Chr04 23134593 23138525 28910757 28914655 3899
02428_127742_INS0450120_1 Chr04 23134593 23138525 36651429 36655379 3951
02428_132424_INS0455470 Chr04 23134593 23138525 29792907 29796805 3899
02428_132424_INS0455470_1 Chr04 23134593 23138525 37348875 37352825 3951
02428_CN1_INS0451150 Chr04 23134593 23138525 28308027 28311905 3879
02428_CN1_INS0451150_1 Chr04 23134593 23138525 36157127 36161077 3951
02428_D62_INS0450530 Chr04 23134593 23138525 28340582 28344462 3881
02428_D62_INS0450530_1 Chr04 23134593 23138525 35977540 35981489 3950
02428_DG_INS0451790 Chr04 23134593 23138525 28727461 28731339 3879
02428_DG_INS0451790_1 Chr04 23134593 23138525 36401994 36405944 3951
02428_FH838_INS0448520 Chr04 23134593 23138525 28797191 28801069 3879
02428_FH838_INS0448520_1 Chr04 23134593 23138525 36360980 36364930 3951
02428_FS32_INS0449420 Chr04 23134593 23138525 28420266 28424144 3879
02428_FS32_INS0449420_1 Chr04 23134593 23138525 35936465 35940415 3951
02428_G46_INS0449100 Chr04 23134593 23138525 27886940 27890818 3879
02428_G46_INS0449100_1 Chr04 23134593 23138525 35781542 35785491 3950
02428_G630_INS0446940 Chr04 23134593 23138525 28922502 28926380 3879
02428_G630_INS0446940_1 Chr04 23134593 23138525 36506112 36510062 3951
02428_G8_INS0451140 Chr04 23134593 23138525 28619971 28623867 3897
02428_G8_INS0451140_1 Chr04 23134593 23138525 36332839 36336789 3951
02428_HZ_INS0449470 Chr04 23134593 23138525 29082424 29086322 3899
02428_HZ_INS0449470_1 Chr04 23134593 23138525 36781794 36785744 3951
02428_II32_INS0450230 Chr04 23134593 23138525 28839351 28843229 3879
02428_II32_INS0450230_1 Chr04 23134593 23138525 36562118 36566068 3951
02428_IR64_INS0452740 Chr04 23134593 23138525 27268280 27272180 3901
02428_IR64_INS0452740_1 Chr04 23134593 23138525 31730445 31734363 3919
02428_IR64_INS0452740_2 Chr04 23134593 23138525 34934297 34938247 3951
02428_J4155_INS0430720 Chr04 23134593 23138525 34834223 34838172 3950
02428_J4155S_INS0430240 Chr04 23134593 23138525 35458920 35462872 3953
02428_LK638S_INS0452630 Chr04 23134593 23138525 28837617 28841498 3882
02428_LK638S_INS0452630_1 Chr04 23134593 23138525 36647822 36651776 3955
02428_R498_INS0449620 Chr04 23134593 23138525 27802941 27806839 3899
02428_R498_INS0449620_1 Chr04 23134593 23138525 35497799 35501749 3951
02428_R527_INS0449740 Chr04 23134593 23138525 28383602 28387500 3899
02428_R527_INS0449740_1 Chr04 23134593 23138525 36048984 36052934 3951
02428_R9311_INS0452830 Chr04 23134593 23138525 28991510 28995361 3852
02428_R9311_INS0452830_1 Chr04 23134593 23138525 36665546 36669491 3946
02428_S548_INS0449500 Chr04 23134593 23138525 27864659 27868557 3899
02428_S548_INS0449500_1 Chr04 23134593 23138525 35563473 35567423 3951
02428_TM_INS0449040 Chr04 23134593 23138525 27029296 27033174 3879
02428_TM_INS0449040_1 Chr04 23134593 23138525 34536493 34540443 3951
02428_Tumba_INS0452920 Chr04 23134593 23138525 29350371 29354248 3878
02428_WSSM_INS0451450 Chr04 23134593 23138525 28471679 28475577 3899
02428_WSSM_INS0451450_1 Chr04 23134593 23138525 36140268 36144219 3952
02428_XL628S_INS0451350 Chr04 23134593 23138525 28964745 28968641 3897
02428_XL628S_INS0451350_1 Chr04 23134593 23138525 36800963 36804913 3951
02428_Y3551_INS0451650 Chr04 23134593 23138525 29144065 29147944 3880
02428_Y3551_INS0451650_1 Chr04 23134593 23138525 36856485 36860435 3951
02428_Y58S_INS0448150 Chr04 23134593 23138525 36660589 36664539 3951
02428_YX1_INS0449720 Chr04 23134593 23138525 27366337 27370235 3899
02428_ZS97RS3_INS0450990 Chr04 23134593 23138525 29178690 29182568 3879
02428_ZS97RS3_INS0450990_1 Chr04 23134593 23138525 36903562 36907512 3951
02428_MH63RS3_INS0452570 Chr04 23134593 23138525 29403750 29407628 3879
02428_MH63RS3_INS0452570_1 Chr04 23134593 23138525 36975562 36979512 3951

>02428_127742_INS0450120
tgtagcgcccgttccgtcgtggcgcctagcgggaaaattatctcttaaaaaccctaattgcgaaatttgtttctttgcttgttgtctagtgtccgtgccatctcaagatctcaaatccccgatatatcgtcgagttcaattccgaatctaaatccttccaaatcaaatccctccgcaaaagtctattttgcctcccccggggtcgatgggccgaatctctttcggcccatctccccctccctctcggcgctctctctctctctctctctctctctccctctctcccttcccctcgctctgcccgcgcgtgcgcgagcgccgcgccgagcgccccctccccctcgctctccttctccccatccctggcgagctccccgcccacgaagccggccccgcgcgccgttgttcgcgcgcgcgcccgcgtggttgccacccgtgccgcgccgcctgcgccgtccgcgtcacccggccccgctgccctgccgcgcctgcagccgctcggccccgcagccagcgcgcgtgcccgagccgagccactcaatccgccgcgcctcccgttgcaagccgcgcgcgagagccgtggtggccgaccgcctggtcgccaccatcgtcagcgcctgcccgcgcctgtcgcccgtgtcaccgcctcaccgtcatcaccgtcgtcatcgcctcggccccgccactccgcgcgcaagccgccaagggacggaggcagagcccctcctccctctaccacgtcgcccccgctcccctcctccttttcccaaagaggcaaggggcgagccccctttctctccctcattttcccctttttccccccgccggcgtcatcctccctccgtcttgtcgccgatttggccgcgagcgccgagcgccagctcgcgccttgaccgcccaaagtcggtttccaaaccgacattgccgccctttaaacccaggcgccctcccttcctctttccccccaatcctccccgtttctcgtccgcgccattgccgccacctcctgtgctctgtctcgcctccgccgttcatcgccaagcaccgggagagctggtgcgttcgttgacgcggaagcggaagggtactccgggcgctcgtcttcctcctcttccccggcccgaggccggagagatcactcccgcgccgtcagcctctcgtcacagcgccccgcctcatctcggtagtgcctccctccgttcttcctcctcgttccatcttccccccttagttttcggtagtagcacgagtagcctccccgtagctagccggcgccgccccgatcgttgccgctgctcgccgtgtgcccgccaccgtcgccgcccgtgctccgtagcacccgctcgtcgccggcctcgctcggcgtagctccgcccaatccgacgctagcaacgaattcccgtagccgcgtagatgctctcaccgccgggaattggcccctcgtgacctcgtcgccgtttcccccttttccctccgccgggcgccgccgccgcaatccgccgccgacggactccctccggcgaatccaagccgttggctcgctccctctcattctccctcgtcatcccggtgtacgccccgtcgcccctcatcgtcgcaaggcgtcccggagaaaccaccgccgcccgccgtccattcgcggccggcgccttcgtcttcctcccgccagcccgcgtggcagccacgtaggcgccacgtcggcgccagctcggccgagatcagatcaggccgaccccggtcagcccctcccgtgcgcgcgttccaccgcgagccgtgaggctgcgcgtgggcccaccgcatccgttccaccgcgaaccacgcgcgtgcaccgcatcccttccccgcccgtgcgcgtgcgccgcgtgctcgctcagcacggtgaaccgtgtcaccgacaagcgggtcccacccgggaccacgcgtggtgagcccggtccaccggccctccctctcctcccctcccgcgcgcgcgcttgggccgccttgggccggtcggcccatttagctcggccggaccgctccgtttctctcgggccgtgccctagccgcccgaggaaaagtctattatccctccctcttttcttttctttttcaaaaaggatttaattaaattcttttcctttagaccaaaaatccaataatcttagaaattcaatatcttcccaaccgtaaatccgtttgactccgttccacttccaaaattcctcaaatctcgagatctatctaatggcacgcttagaggtcattaatagggctttattttcgccgtttgttgagttgtcccgtttcgcgtgtagtttcggagcccgaagacccgcagtgcgaggattttgaggatcaagctccagatttcaagcaaggcaagccacctttgaacatcttgagcctatatttgaatttaattatattgcttgaaaaatattatgcattgataggatcgcacttaatctgtttgtcccgtctgcaaggcagattggcggacctacctagtttgttgcatttgatccttcctttgttaattgttataccatgttcccttgtaaccacccagttgcgcctcgggaatcgtgcactctgtgcgagtaccgacggtcgccttcaaacttcaaatctgagtaacaacttgggtaaaacttgggttttacaaaagacttggaaaacccgacacctgggtcggtgcttgcgaactaaatgaatttccaaaaccgcggaccggggaacgtaccgggtgtacggttttcccgctcttgcacctaaggaccgtttccttggaatttcatccaaacataagacaagtacgaccacatgggtggaatgggacactcctggctgagtaactagcttatcaggggagccttgatgccgagagacatgtggattcgccggggtggtgtcggggaggacccctgggcttcctggcacagtatggtctgggacctaacctgttgttggtctgggacccctctcgtcggcatatggtaaacctgtgtcggctttggaaatgccttgtcatgaaagcttggaggtctcccgacgtggctgatccccacgggctgggtgatccgggttagtaatgtcgtgtgggtaaagtgtaccccctctgcagaggttaacaaactgttcgaacagccgtgcccacggtcatgggcggatgtgaggtgattcctagcgtagttttgtttgactactgcttgtgaaattgctgttgtggaaaggggttcgatgtttaaaaaatctgcagctgatgggatcagctaggcccgggtggccgtttgaaagttgttggcccgggtggccgtttgaaaagctgttggccgggtgccaaccttgattcaattctaaagactgatacattgcacatactccgaccggacaagatgcactgtctcatccgtgtcgtttgagaagcactcacttagttgttttcagaaaggagttcaaataaaatcaattgtaaaaacaacagccttttcttgaagcctgcattaaacacttatttcccatggcttgctgagtactcccgtactcacccttgctctatataaataatCCccccccagttgctgaagaagatgaagcggatcctgctgatgaggagttcttccaagagcaagccggctacgatgagtattagggtttcggcctagttcccaagtcgcgcctgtgttgtttggtccaagtcctggcttccatttcccttttgtaatgcagttgtgagctcgggatctgtccgcagcccaacatgactgtacctctactctataataaagagacctctgttgctgtgataatccgtcttcctgtgataacagcactattttctgggactggtatcgattaacaggttaatttggagcgtcacgggctagttccggtcggtactagtccggggcgtgaca

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.