Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsR527G1180002913.01 | OGI:07026890 | 27/50 | Os XI-1B: R527 | R527 | SICAU | Chr11:13182118-13194546 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | 127518_R527_DEL1116200,HZ_R527_OTH1122040,HZ_R527_DEL1122240,HZ_R527_OTH1122020,J4155_R527_OTH1114040,J4155S_R527_DEL1123350,J4155S_R527_OTH1122420,OglaRS2_R527_INS1142400,OglaRS2_R527_INS1126690,OglaRS2_R527_DEL1130890,OglaRS2_R527_INS1142370,128077_R527_INS1122270,128077_R527_INS1125500,Kosh_R527_INS1121720,Kosh_R527_INS1123000,G46_R527_INS1117420,G46_R527_DEL1119640,DHX2_R527_INS1119490,DHX2_R527_INS1119520,125827_R527_DEL1123140,125827_R527_INS1123150,125827_R527_OTH1123160,D62_R527_INS1115090,D62_R527_INS1116620,127652_R527_INS1125160,127652_R527_OTH1125150,LJ_R527_INS1113650,LJ_R527_INS1123730,LJ_R527_INS1125020,Basmati1_R527_INS1123870,Basmati1_R527_INS1123970,Basmati1_R527_INV1123530_1,Azucena_R527_INS1124360,Azucena_R527_INV1123980,IR64_R527_DEL1112870,IR64_R527_INS1112880,IR64_R527_OTH1112890,CN1_R527_DEL1121450,CN1_R527_INS1121460,CN1_R527_OTH1121470,ZS97RS3_R527_OTH1124980,FH838_R527_DEL1116270,FH838_R527_INS1116280,FH838_R527_OTH1116290,II32_R527_DEL1117150,II32_R527_INS1120740,II32_R527_DEL1120750,II32_R527_DEL1120570,132278_R527_INS1112500,132278_R527_INS1123560,132278_R527_INS1123210,G8_R527_DEL1110560,G8_R527_INS1110570,G8_R527_OTH1110580,G8_R527_DEL1112280,XL628S_R527_DEL1126270,XL628S_R527_OTH1125340,KY131_R527_OTH1122310,125619_R527_OTH1116240,WSSM_R527_DEL1117160,WSSM_R527_DEL1117190,WSSM_R527_INS1117200,WSSM_R527_OTH1117210,117425_R527_INS1120900,TM_R527_DEL1118490,TM_R527_INS1118500,TM_R527_OTH1118510,TM_R527_DEL1118460,NamRoo_R527_OTH1122910,LK638S_R527_DEL1124200,LK638S_R527_OTH1123250,DG_R527_DEL1117640,DG_R527_DEL1118390,DG_R527_INS1118400,DG_R527_OTH1118410,02428_R527_INS1120080,Lemont_R527_INS1128320,ZH11_R527_INS1120550,
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| DNA seq | AGACCAATATATGCCGATATTGGCATTAATTGACAAAGTTTGCCGCGCGAGTCACGAAGTGAGTTTTTGCCACGAACGCAACCAATACACTCCAATATTTCCAAAAATCATATTTTGGGGCTTTTTGAACTTTTTCATTCCGGCCAAAAACATCGCACCCGTGTGGACCAATATTTGCCAAAATTTCGCCGCGCGAATCACTGATGCGAACCCACTAGGGTTTGTGGTCCGATCTTTCGATGAGAGGTAAGGGATAACTTGATTAGATGAAGACGACGTTCACGACCCGACTACAACTGTCCAAAGACGTTGCGCCTTAGCAACCGATACACCGTCTCCAATGGTCGCCGCGAATTTGTGGTGCGCGTCAACCCGGCCACGAGGGCACTCGTCCTGCAAGCAATCGAAGAACAAGCAAGAACAAGTAGGACAAGCACTGAAATTGCTAGATTAAGATGAAAGTTTCACTATCAAACACAATATGGTGGGGTTCCGATTACAGGCAGACGGGCGGTTTAGCCAACACGCACGCTGCGAGCCGGTAGCAAGAAGATAAAGATGAAAGTTTCACTATCAAACACAATATGGTGGGGTTCCGATTACAGGCAGACGGGCGGTTTAGCCAACACGCACGCTGCGAGCCGGTAGCAAGAAGCTATCTCTATCATCAAAACCCGCCTGTTCTTGGCGGCGACTAGAGATATAAGAAGAGGGGAAGAACGACCATAGGGTCGTGCTCCAACCCTAGGACGCGCCCCTAATGGGCCCAACTTGGATACACAGCCCATTGGGCCAAAAGAGGTGACGCAGCACCATGGACAGAAAAAAGTCGGGAGTAAAATGACAATTGCGGCCGCTCCAGAACAGATATGGACATGTGGCTGGATCCATTTGAAAGTAGACTTGATAAGCTTTCCATGAAGTACTTGCACGCCCAAATCGGAGTTCGCATGAAGTCGTGGCGGTCGTCAGAAGTTGGCGCTGCCCTGCAGTCTGAATCCACCCCGCGCGAATCCTCTTCCCTTTGGATCCTCTCCATCGTTCCTGAGTAAAACACGAGCGCACGCGTCTCTGGGGTATAAAGACGAGGAATATGAACTCACCTGATAATTTAGTTGACGTGCACGAGCGCGGGTAATAGGACCATCATGCTGTACATGGGGGGACGTGGATGTATCGATGGTTTTGATGTCCTCATCATCCTCCCCTTCTTGCATTTGAGTCGTCCTCAACTCAAGCTCATCTTCTTCTCCCAAATACGGCTTCAAATCTGCAACGTTAAATGTGGGACTAACCCCGAAATCTGCAGGCAAATCAATCTTATATGCATTCTCATTAATCTTTGCTAACACTTTAAATGGTCCATCAGCTCTAGGCATCAATTTAGACTTTCTCAAATCAGGAAATCGTTCTTTTCGCAAATGCAACCAAACCAAATCTCCAGGTTCAAAATTCAATTCCCTTCTACCTTTGTCACCAGCAAACTTATACTTAGCATTCATGCGCTCTATGTTGTTTTCTTTAGTTGTCTCATGCAGTTTTAACATCAACTCAGCACGTTGCTTAGCATCAAAATTCAGTTTTTCAGAAGATGGTAAAGGCATCAAATCAATTGGAGCACGAGGCAACAAACCATACACAATCTGAAATGGGCACATTTTTGTAGTAGAATGCAAGGAACGATTATAAGCAAATTCAATATGAGGCAAGCATTCTTCCCACATCTTGATATTTTTCTTCAAAACAGCCCTAAGCATAGTAGACAAGGTTCTATTCACCACTTCAGTTTGTCCATCAGTTTGGGGATGACAAGTAGTAGAAAACAAAAGTTTAGTCCCCAATTTAGCCCACAAAGTTCTCCAAAAATGGCTAAGAAATTTTGTGTCACGATCAGAAACAATTGTGTTTGGCACACCATGCAAGCGAACAATTTCTCGAAAGAACAAATCAGCGATATGAGAAGCATCATCAGTTTTATGACATGGTATGAAATGTGCCATTTTAGAAAATCTATCCACAACCACAAAAATGCTATCACGCCCCCTCTTGGTCCTAGGCAATCCTAACACAAAATCCATTAAAATATCTTCCTAAGGAACAGTAGGAACAGGAAGAGGCATATACAAACCATGTGGATGTAAGCGTGACTTAGCCTTTTGACATGTAGCGCAGCGAGCAACGAACCTGCCAACATCTCTTCGCATCTGTGGCCAAAAGAAATGACTAGCAAGGATGTCATGTGTCTTCTTGGCACCAAAATGTCCCATCAAACCGCCTCCATGCGCTTCCTACAACAACAACAAGCGAACGGAGCTAGCTGGAATGCATAGCTTGTTAGCTCTGAAAACAAACCCATCATTGATGACGAATTTGTTCCATGCTCTTCCATCCTTACAACGCAGCAACACATCATTAAAATCAGCATCATGCGCATATTGGTCTTTGATTGTTTCCAGGCCAAAAATCTTGTAGTCAAGTTGTGTCAACAAAGTGTATCTCCTAGACAAAGCATCAGCAATGATGTTCTCCTTCCCTTTCTTGTGTTTGATAACATAAGGAAAAGATTCAATAAATTCAGCCCATTTAGCATGTCTACGGTTCAGCTTCCCTTGACTACGAATATGCTTCAAAGACTCATGATCAGAATGTATGACAAATTCCTTGGGCCACAAATAATGCTGCCATGTTTCTAAAGTTCGCACAAGAGCATACAATTCCTTATCATAAATAGAATAATTCAGAACAGGCCCACTCAACTTTTCACTAAAATATGCAACAGGTTTTCCTTCTTGTAGCAAAACACCACCCAATCCAATCCCACTAGCATCACATTCAAGTTCAAAAGTCTTAGTAAAATCGGGAAGTTGGAGGAGAGGTGCATGGGTCAACTTATCTTTCAACATGTGGAAGGCGTTCTCTTGTGATGTGCCCCAAGTGAAAGGCACTCCCTTCTTTGTAAGCGCATTCAATGGTGCAGCAATGGTGCTGAAATCCTGCACAAAGCGGCAATAGAACCCCGCGAGTCCTAGAAAGCTCCGCACTTGTGAGACCGTTTTAGGAGTCGGCCAACTCTGAATTGCCTCAACCTTGGCTTGATCAACCTCAATCCCCTGTGGAGTTACAACATAGCCAAGAAAAGAAACTCGATCTGTGCAAAAGGTGCACTTCTCAAGGTTACCAAATAAACGTGCATCACGAAGAGCATTAAAAACAGCACGTAAATGATTAAAATGTTCACCCATAGACTTGCTGTAAATCAAGATATCATCAAAGTAGACCACCACAAATTTTCCAATGAAAGGATGCAAAACCTCATTCATCAACCTCATGAAAGTGCTGGGTGCATTAGTTAAACCAAAAGGCATCACTAACCACTCATACAACCCAAATTTCGTTTTAAATGCTGTTTTCCATTCATCACCCAACTTCATACGAATCTAGTGGTAACCACTACGCAAATCAACTTTGGAGAACACAATAGAGCCACTCAATTCATCAAGCATATCATCTAACCTAGGAATAGGATGACGATATCGAATGGTAATGTTATCAATAGCTCTACAATCAACACACATACGCCATGAACCATCTTTGGTACCAAAATTACCGGAACCGCACATGGACTAAGAGACTCGCGTACATACCCTTATCAAGCAACTCATGAACTTGACGCTGAATCTCCTTGGTTTCGTCAGGGTTGGTTCGGTATGGCGCACGGTTCGGTAGGGAAGCACCTGGGATCAAGTCGATTTGATGCTCAATGCCACGCACCGGTGGCAGCCCCGGTGGCACTTCCTTGGGAAACACATCAGAGTACTCCTGCAAAATGTTAGCAACAGCAGGGGGCAAAGAATGCTGCATATCGTGAAGTGAAATCAAAGCATCTTTGCATACCAAAGTATAGGCAACTGAAGGTGATGCAATCAACTCATTAATATCAGATTTAGTAGCAAGTAAGCATTTGGGTTTCAAATTGATTGTCTCAGGTTTCTTGCCATCAGATTGGACTTTTTTATCACTCTCACATTTGGAATTGGCAGCCTTAGCAACATCATCACGCAAAATATCTTCAGGAGACATGGGATGCAATACAATTTTCTTATCATGGTACAGAAAAGAGTACTGGTTTGACCTACCATGATGCATAGAATCCCTATCAAATTGCCATGGTCTACCTAGGAGAATATTACATGCTTGCATGGGCACAACATCACATTCAACAACATCATGGTAATTTCCAATTGCAAAATTAATGTGCACCAGTTTTGTTACCTTCGCCTTACCACTGTTGTTCAGCCATTGGATGTAGTATGGATGTGGGTGCGGTTTGGTGCTAAGTGCAAGCTTCTCCACCATCTCGCTGCTAGCCAAGTTGTTGCAGCTACCTCCATCAATGATCATGCGGCAACAACGCTCTTTGACGACACACTTTGTTTGGAACAACGTGTGTCGCTGATTTTGCTCCGCCTTCTCCATTTGTGCGCTAAGGACACGCTGCACAATGAGGCTCTCATAGTGATCCGCAAATGCAGCCCCAATGTGCTCTTCCGGTGGCTCATTATCTGCATGGTCAGCCGCAAGCAAAGCAAGTGTATCATCATCGAAATCACTAGCAGAGGAGTACTCACCATCGTTTTTGACTACCAAAACTCGCTTGCTAGGGCAGTCACGCTGCACATGCCCAAAGCCCTTGCAACGGTGGCACTGAACATCTCTCATTCGGCCTGTGGATGCCATTGAAGAAGCACTCGGTGCTGGCTGAGCAGCCTTTGTCGCTGACTTGTCACTAGATGGAGGAGGTGCTGCTCGACTGGTTGTGGGTGTGGAAGATGGAGAAGCAGTACGGCCGGCCGGAGGAGTGGTGCGTGTCTGCCATGATGAAGTTTTACCTGCTGAAAAATTAGCCTTGGCACTAGCACGTCGTCCCTGCACTTCCCTTTCAGCCTTACAAGCAAGATGAAACAATCGGGTCATATTAGTGTAATCTTTATAGTCTACGATGTCATAAATCTCGCAGTTTAACCCACCCAAAAATCTAGCCATGGCAGCGTCCTCAGTTTCCTCTAAATTACAACGAAGCAAGCCCATTTGTAACTCCTGATAATATTCCTCTACACTTTTCGCACCCTGTCTCAATTGTTGCAACCTATTCAGCAAGTCACGTGCATAGTAAGAAGGAACAAATCTAGCCCGCATGACCTGTTTCAAAGCATCCCAAGTTTGTGGCATGTTATTAGGATTTTTCTTGCCATGTTCTATCCACCAAACCGAAGCAAAATCGGTGAACTCACTCGTAGCAGCTCTAACTCTAGTGTTCTCAGGAAACTCATGGCATGCAAATTTTTGGTCAACAGCAATCTCCCAAGAGAGGTACGTATCAGGATCATATTTTCCATCAAAAGGAGGAATCTTAAATTTAATTTTAGAAAAAGCATCATCATTGTTGCGTACCTCGCGTCGGCGGCGACCACCCATACCTCGTCGATTGTTGTGTAGCCGTCGACGATCTCGAGCATCTCGATCATCTTGTTCAGTGTCAGCAATATATTCATCCTCCAAATTATCCTCGACGTACTCTCCGTCAATGTCATCGTCATTACCCCCACCATTGCCTCCAGCATTGAGAGCATCAAAATGCCTCACAAGAGCAGCAAGGCTAGTGTCAATGCGGGCGACCGCTGTCTCCAGCCCTGTAAGCTTAGTGTTGGTGGAGATCTATGTGGACTCCAATTGTCCAATCTTCTCATTTGTCACCTGCAAATCTGTATCAAGTCCTTCTGTGTGCTGCTTCACTTGCCTTGTAAAGTATTGGATGATGCCTTTGGTGCGTGGGGAATGAGATGCACCCTCCTCATCTTTATCCTCTGGACCTGCCATGGTTTAGAAATGAAGGACAACAAAACAATGGAGGATGTAATGTAAGCCCTACACAACTATTGGGACGTAGCTTTTGCAAGACGCTCACTCTCACTTCACTCGCAGCTTGTCTCACAAGCTCTTACCAGTTCTTACCTTGCCCACAGGAGGGGGACAGCAACCCACAAGTTAGCAACCGTGGAACGAGGTGTATCGGTGCTGTAGCAACAAGACCTGTCAAGCTGTAGTCGGGTTTGTGGTGGAGCTGTTGGTGGGCTGAAAGCAATGCTCAAGAGAAAATTAGAAACCACGTTAGCCAAAGCAAATTGAATAATTGCTCAAGGGTATAGTGTACAGTGCTGGTCCTAGGCTAGTCGAAGTAGAGACGCGAGCCTAACCACAAAGGACGCCAAAAAACACAAACCCAAACAGCAACGAAAACAAGAACCGGTGGTGGAAGGTGGTGACAAAGGGGGAATGGTGGGGTGTGCTCGCTGGATCCTCTTTTTTTTTTTTTGCTTGCTCTCTCTAGTGCTGAGGAGAGAGATACAACTTTTTTTTTTATTTTTTTGATATTTTTTTCACAACCAGGAGCACACTAGAACCAACCACAGAAAATCTTATCTCAAACGGACAAAGTATGAAGCTTGTAGAATTTTTTCAAAGTTCTATGCGAATAGGTCCCGAAGCTTCTCGCCACAAAAACAGAATTTTGCAAGAGGAATTTGGCGATTTTAAATTTGCCGAACCTAGCAAAGCGGGGAGAATCGGATATGACTGTTTTAAGGAAGGTCACTCGAATCAGGGTTCAAATACCTTTCTAGTGGCGGCAGGATACAAGGCAACTCACAAAAGCTATCGGCAACAGATCAAACACAAATAGAAAGTGATTTGGTGGGTGACTGCGACGGCGGTGACGGTGGTGATGACGGCAAAATTGATGAAGGTGGCGATGTGCGGTGGTGGCAAGAACTCGAAACTCTAATCGCCTAACACTAAGACCAGCAAATTAACACAACCGATGCAATCGAAAACTCAACAAGCCTTAACTAAGCAGTACTAGTAAAAAGGCACAATGGTCTATAGGATCACGGGAAAACTAATCTACTATTTCTTTTTTGTTGGTCTTTTCTGGACTATAGGAAAAAAAATTAATGACGAAGGGAAGGGTAAATTCTCTCACCGATGAACCACGCTCTAATACCACCTGATGCGAACCCGGTAGGGTTTGTGGCCCGATCTTTCGATGAGAGGTAAGGGATAACTCGATTAGATGAAGACGACGTTCATGACCCGACTACAACTGTCGAAAGACGCTGCGCCTTAGCAACCGATACACCGTCTCCAATGGTCGTCGTGAACTTGTGGTGCGCGTCAACCCGGCCACGAGGGCACTCGTCCTGCAAGCAATCGAAGAACAAGCAAGAACAAGTAGGACAAGCACTGAAATTGCTAGATAAAGATGAAAGTTTCACTATCAAACACAATATGGTGGGGTTCCGATTACAGGCAGACGGGCGGTTTAGCCAACACGTGCGCTGCGAGCCGGTAGCAAGAAGCTATCTCTATCATCAAAACCCGCCTGTTCTTGGCGGTGACTAGAGGTATAAGAAGAGGGGAAGAACGAACATAGGGTCGTGCTCCAACCCTAGGACGCGCCCCTAATGGGCCCAACTTGCATACACAGCCCATTGGGCCAAAAGAGGTGACGCAGCACCATGGACAGAAAATAGTCGGGAGTAAAATGACAATTGCGGCCGCTCCAGAACAGATATGGATATGTGGCTGGATCCATTTGAATGTAGACTTGATAAGCTTTCAATGAAGTACTTGCACGCCCAAATCGGAGTTCGCATGAAGTCGTGGCGGCCGTCAGAAGTTGGCGCTGCCCTGCAGTCCGAATCCACCCCGTGCGAATCCTCTTCCCTTTGGATCCTCTCCATCGTTCCTGAGTAAAACACGAGTGCACGCGTCTCCGGGGTATAAAGACGAGGAATATGAACTCAAGAAAGAACTCACCTGATAATTTAGTTGACATGCACGAGCGCGGGTAATAGGACCATCATGCTGTACATGGGGGGACGTGGATGTATCGATGGTGTTGATGTCCTCATCACCGCCCATAATCGCGGGCATGGCTATTCGAATAGTTTTACTCTGATCAGAGGTGTACAACTGTACCCACAAGACACAGCCCCACGACACGTTTCCGTGCGCCGACATGCCACCACGACATACTGGATAGAGGCCGTGACAGGACCCAAGCACACCACACCTCAGGTTTCACCCCCACTCCTCGCAAGGCAGTGGGCAGTCCCCTCTCGTGCCTAGGTGAATCCAAAAGCCGCATAGGCCATCGCAGGGCCCATCCAAACTCCATCACGCCCACCCTTGCCTGGATGCGTCAGCTAGAGGAAAGCTACACTACAAGCCCAGCCGTTGCCCACGCTGGCTTGTGGTAAGTATGAGGGATTCTTCTAGGGTTTCCCGCGAACCGGTCCTTAATTGCCATGGGTGCGACTAGCAAAACCATGCACCCGCAGCCCACCATATGATATATTTTAATTAACCAACACCAAGACGGTGGCTCTAATCCAACATCAACACTAGAACCTGAAGTCTATACATTAATGTGATTCCACCCCATTGTGTGCTAGTTGAACTAAGCATGGCTAAGCAATCCCTAGTTCAATATCTAGTCATGTTATATCCCAAGCTAACAAAGGAGCATGGTACAAAAATAGCATGGCTATAAGAGAAGGTAAACATCCCATGGTATCATGGTAAAACAATGCAGTATTTAAAGGAAAACAATAGAACATTTACAATATAGGATCAACATGTTCAAGTGGCAAGCATGACTTGCCTTGCTCTGCTGCTGGAGGAACCTCGGCGACTAATTCAAAGTACACCGGAGCGTCGGGAGAGCCGGAATCTAAGCGTCATACAAAGCAAACAATACAAACAGACTATAAGACTACTGAAACAGAGAACAAAACCATTTTTACTGGATTCTATGCATTTTTCTTGATTTACTGAGACTTGAATGGGCTTAAACAGAGCTCGGATGAATTTTCTATGAATTTTAGAAGATTCCCGGGGAGAGAGAGGCGGCGCCGACATGCGGGCCCCACATGGCAGTGACTCGGGGGGCGGTCCGCGGTGGACTGGGTCCACGGACCGGGTAAGGGACGGCGCACCATGTGGTGCACACGTGGCGCCGACGCGGCGCACACGTGGCGGCCACGTGGCAGCCACGCGGGCGGCGGGATTGGTTGGCCCCGATCTACCCTCGCGACGGGAGCGCGTGGCCGGCGCGCACGGGCGGCTCATGCCGGCCCGGTGGCCATGGCGCACGGCGGCTCGACTCGACATAGCGGCGGTGCAAGGCGGCGACCGGCGGCGACCGGCTGGCGGCGGAGAGCGGCGGCGTCGCGGCGAAGCGGATGGTGATAGCGGCGGCTAAGCGGCTAGGCGGCGGCGCGGCGGCTAAGCGGCGCGGGAGAGAGGGAGAAAGGGGAGGAGGTGCCTCACCGACGGCGATTGACGACGGCGAGCGACGGAGGACGATGACGACAGCGGGACGAGCTCCGGAACCACCTAGCGAACACGATGAAAGGGGTTAGAGAGAGAGAGAGGAAGATGGAAGAGAGCGAGAACGCCGGCCGAAGGCGGCGGCCATGGTGGTGCTCACCGGCGCACGGTGCGGAGTGGGTTCCGGCGGCGGATTCCGACGGAGGAGGGGTGGACGGGATGATCCACACGACGGCGAACGCGACGGCGTCGACGGCGCAACTCGGCACAGCGGCTAGCGGCGACCGGAGCAGCGGCGGCGGCGGCGGCGGGGAGGAGGGCGACGGCGCTAGGGAGGTGGAGTGCACGAGAGCGGGCGATTGCAAAACGAAAAAGAGAGAGGAGGGAACGGGGGTGCTTTATATTTGACTCACGAGGGTCGATCGTGGCCGGGGAGACTGCGATTTCGCCAGCGTAGTGGGGAGAGGTGGGGAGGAGAGAGAGGCGGGATTCAAAAATTGAATCTCGGCCGTCTCGAGCGCGGGAGCAGGCGGGAGAGAGAGGGAGTGGGCGCGGGGAAGGCGGGAGAGAGAGGGAGTGGGCGCGGGCGGCGACGTGGGCAACGTGGCCCGGGAGATGCAGGAGCGAGCGGGGCGGCGGTTGCGGGATGCGGCGGCGCCAGCTGGAGGTGGGAGACGGGCCCGACAACTGGGCCCCACCTGTCGGCGACCCAAAGGGGGAGGGAGGCGACCGGCTCAGCTGAGCCTCGGCCTTTGGCCGGCCTAGTGGGGAGGGGGAGAGGAAGAGAATGGGCTGGCGGCCCATTCGAAAAGGAAAGAAAAAGAGGGAAAAAGAGAGAAAAGGAAGGAAATGAATTTCCAGGGAATTAAATATTGCTCTTGCTAATTTTTAATTGGTTAAAATTATTTCTAGAGCTCTGAAAATTCCACTAAAAATTTTCTTAACGTATTTCGACATGTAGAACTGAAGAAAAATCCCACATGCCAGTTCCGATTATTATTTGCATTAATTCCTTTAGGGTTTCTCTCTTGCTTTTACACCGATATTTTCTTGAGACCATTTATAAATTCAATTTAGGCTTGGGATAAGAACTTCAGGGAGTGACAATTCAGAACCAAGTTGATAGAGCTGTTGAAGGAATTCAGAGATTGCTTATCTTGGGAGTATTATGAGATGCCCGGACTCAGCCGATCGATTGTTGAACATCGGCTACTTATGTCACGTCCCAAAACGACCCTAAAATATATCCTTTAAATTATGCCTAGAATAATTAAAATCCTTGTGGAAGCCTCCAGAAATTAAAATGTGCAAAGTTAAAAGTCAAATAAGGCTTGGAGGATTTTTGTATATTTCCTAAAAGCCTAAAATGTCTAAATAAATTTCAGTGGAATTTTCCGAGCGCAAATAACAATTATTTCTATAAACAAAGTTGAAAAGGCTTTATAAAAAGAAAAACCCTAAAACCCTCTCCCCTCTCTCTTGGGCCGAATTCAGCCCAACTCCCTCCCCCTCTCTCTCCTCTCGTAGCAGCCCACTCGGCTTCCCCTCCCTCCCCGCGTGCGCGCCGCTGACGGGCGGGCCCGCCCGCCACCCTCGCTGACGGGAAGGGGCCCACCCGTCATCCCCCTCCTCCCGCCGCTCCGTCACTCCCTCATCTCGCGCCTAACGCCGCCGCCGCTGCAAATCCCGCCGCCCCCGACCGTTTCCGCGTGCCATTAAGTGGGGGGAAATATTCCCCGTGATTCCCTCTCCCTTTACCCCCATTTTCCCCCCTCTCTCCCGCGTTCAAATGGCCGGATTTGCTGCCGCAAATCTCGCCGGCGCCATTGATGCCGACCGGGACCCCCGCGCCAGTTTCCTTCCCCACCGGCCACCCTCTCTCACTCCGAAACCTATATAAACCCTCCCCGCACCTTCCTTGTCAGTTTCCGCCGTTTGCCGCCCCTCCTCCCCATCGGATTCGCGCCCGCGCCGTCGTCCTCTCTCTCTCTGCCGTTGCCGTCGACCTCCGGCTGGGCCCAGCCGCTCGCCGGGACCGTCCCCCGCCTCGGCGTCGTCTCCTCCGGCTTCGCCGCACCACCGCCGACCCCGTCCACCGCCTTGCCGAGCTCGCCGACCGCTGGAACGCTGCCGTCCCCGTCGACCTGAGCCGCACCACCGCCTCCCTCTACTCCGGTCGCCTCCTCCGTCGCCGTCGTCGCCCCGTGGACCGCCGCCTCTTTCCCCCTTCCCTTACACTCTCTCTCGGCCGCCGCTGGGCCGCGCCTATGGCCACCGCCGGCGACCATAGGGGCGCGGGCGCCGCCTCCCGCCGGCCGCGCCGACGTGGCCGCCTCCAGGCGCGCCGTATGGCCGCCGCGTGGGGCCCAGCCGTCTGCCGCCCGTGCCCTCGTGTACGGCTGACGCGTGGGGCCCACGGCGCCGGCTGGTGAGCCGTGGATTCACCAGGTCCACCGTGGACCGAGGAGCTGCCGCGTGGGACCCACCACTCCCGTGGACCCGGTCCGCGCACCCCCTCCCCTCGGCTGACGCAATAAACCCTATTTTTAATTAAAATTTAAATGAAGAAATTCGCAAATATTCACATTAAGAGCATATAAACTTCAAATGGCCATATCTTTTCCTTAAGAAGTCAGGAACCTATTTTTGTGCTTTGTTTCTGCTTGTTATATGGATTTTATTAGAGTAAAAGCCTTTTTCTTTCCATTGGTCGTGTAGACGCTGCAGCTTCGGAAGATCCGCTCTATGTGGAGCTTGAAGCCGATGTTTGGGAAAGCGAGCAAGGCAAGTCACATCATCCTTGAACATATTGAATCCCAGTTTATAAAATTAGTTTGGTTTAAATTACTGCATTATCGCTTTATTTAAATTCCCGCGTTATCACAGTTTTATTTAGCCATGCCTATTTACCTTTGTTGTGACCTTATTATTATTGCTATTGTTATTATTACCTTGTTCACCCTAGGATAAACAAAACCCTAACTAGTGGGTACCCTATTCATGGTTCCACTAGTATGAATTTAGCTAGCTGCTTCGCTG
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| CDS seq | MVAGGGHRRGPAAAERECKGRGKEAAVHGATTATEEATGVEGGGGAAQVDGDGSVPAVGELGKAVDGVGGGAAKPEETTPRRGTVPASGWAQPEVDGNGREREDDGAGANPMGRRGGKRRKLTRKDECPRGRVDAHHKFTTTIGDAHQQLHHKPDYSLTGLVATAPIHLVPRLLTCGLLSPSCGQGLETAVARIDTSLAALVRHFDALNAGGNGGGNDDDIDGEYVEDNLEDEYIADTEQDDRDARDRRRLHNNRRDNEPPEEHIGAAFADHYESLIVQRVLSAQMEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAKAANSKCESDKKVQSDGKKPETINLKPKCLLATKSDINELIASPSVAYTLEYSDVFPKEVPPGLPPVRGIEHQIDLIPDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFTKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSIYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWAEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLRCKDGRAWNKFVINDGFVFRANKLCIPASSIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENNIERMNAKYKFAGDKDFGVSPTFNVADLKPYLGEEDELELRTTQMQEGEDDEDIKTIDTSTSPHVQHDGPITRARARQLNYQDECPRGRVDAHHKFAATIGDGVSVAKAQRLWTVVVGS
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| Protein seq | MVAGGGHRRGPAAAERECKGRGKEAAVHGATTATEEATGVEGGGGAAQVDGDGSVPAVGELGKAVDGVGGGAAKPEETTPRRGTVPASGWAQPEVDGNGREREDDGAGANPMGRRGGKRRKLTRKDECPRGRVDAHHKFTTTIGDAHQQLHHKPDYSLTGLVATAPIHLVPRLLTCGLLSPSCGQGLETAVARIDTSLAALVRHFDALNAGGNGGGNDDDIDGEYVEDNLEDEYIADTEQDDRDARDRRRLHNNRRDNEPPEEHIGAAFADHYESLIVQRVLSAQMEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAKAANSKCESDKKVQSDGKKPETINLKPKCLLATKSDINELIASPSVAYTLEYSDVFPKEVPPGLPPVRGIEHQIDLIPDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFTKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSIYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWAEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLRCKDGRAWNKFVINDGFVFRANKLCIPASSIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENNIERMNAKYKFAGDKDFGVSPTFNVADLKPYLGEEDELELRTTQMQEGEDDEDIKTIDTSTSPHVQHDGPITRARARQLNYQDECPRGRVDAHHKFAATIGDGVSVAKAQRLWTVVVGS |
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| Function | Retrovirus-related Pol polyprotein from transposon 17.6 [UniProtKB/Swiss-Prot:P04323] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsR527G1180002913.01 | OsR527G1180002913.01.T01 | Chr11 | 13182118 | 13194546 | - | IGDBv1 | ||
| CDS seq | ATGGTCGCCGGCGGTGGCCATAGGCGCGGCCCAGCGGCGGCCGAGAGAGAGTGTAAGGGAAGGGGGAAAGAGGCGGCGGTCCACGGGGCGACGACGGCGACGGAGGAGGCGACCGGAGTAGAGGGAGGCGGTGGTGCGGCTCAGGTCGACGGGGACGGCAGCGTTCCAGCGGTCGGCGAGCTCGGCAAGGCGGTGGACGGGGTCGGCGGTGGTGCGGCGAAGCCGGAGGAGACGACGCCGAGGCGGGGGACGGTCCCGGCGAGCGGCTGGGCCCAGCCGGAGGTCGACGGCAACGGCAGAGAGAGAGAGGACGACGGCGCGGGCGCGAATCCGATGGGGAGGAGGGGCGGCAAACGGCGGAAACTGACAAGGAAGGACGAGTGCCCTCGTGGCCGGGTTGACGCGCACCACAAGTTCACGACGACCATTGGAGACGCCCACCAACAGCTCCACCACAAACCCGACTACAGCTTGACAGGTCTTGTTGCTACAGCACCGATACACCTCGTTCCACGGTTGCTAACTTGTGGGTTGCTGTCCCCCTCCTGTGGGCAAGGGCTGGAGACAGCGGTCGCCCGCATTGACACTAGCCTTGCTGCTCTTGTGAGGCATTTTGATGCTCTCAATGCTGGAGGCAATGGTGGGGGTAATGACGATGACATTGACGGAGAGTACGTCGAGGATAATTTGGAGGATGAATATATTGCTGACACTGAACAAGATGATCGAGATGCTCGAGATCGTCGACGGCTACACAACAATCGACGAGATAATGAGCCACCGGAAGAGCACATTGGGGCTGCATTTGCGGATCACTATGAGAGCCTCATTGTGCAGCGTGTCCTTAGCGCACAAATGGAGAAGGCGGAGCAAAATCAGCGACACACGTTGTTCCAAACAAAGTGTGTCGTCAAAGAGCGTTGTTGCCGCATGATCATTGATGGAGGTAGCTGCAACAACTTGGCTAGCAGCGAGATGGTGGAGAAGCTTGCACTTAGCACCAAACCGCACCCACATCCATACTACATCCAATGGCTGAACAACAGTGGTAAGGCGAAGGTAACAAAACTGGTGCACATTAATTTTGCAATTGGAAATTACCATGATGTTGTTGAATGTGATGTTGTGCCCATGCAAGCATGTAATATTCTCCTAGGTAGACCATGGCAATTTGATAGGGATTCTATGCATCATGGTAGGTCAAACCAGTACTCTTTTCTGTACCATGATAAGAAAATTGTATTGCATCCCATGTCTCCTGAAGATATTTTGCGTGATGATGTTGCTAAGGCTGCCAATTCCAAATGTGAGAGTGATAAAAAAGTCCAATCTGATGGCAAGAAACCTGAGACAATCAATTTGAAACCCAAATGCTTACTTGCTACTAAATCTGATATTAATGAGTTGATTGCATCACCTTCAGTTGCCTATACTTTGGAGTACTCTGATGTGTTTCCCAAGGAAGTGCCACCGGGGCTGCCACCGGTGCGTGGCATTGAGCATCAAATCGACTTGATCCCAGATCGAGTTTCTTTTCTTGGCTATGTTGTAACTCCACAGGGGATTGAGGTTGATCAAGCCAAGGTTGAGGCAATTCAGAGTTGGCCGACTCCTAAAACGGTCTCACAAGTGCGGAGCTTTCTAGGACTCGCGGGGTTCTATTGCCGCTTTGTGCAGGATTTCAGCACCATTGCTGCACCATTGAATGCGCTTACAAAGAAGGGAGTGCCTTTCACTTGGGGCACATCACAAGAGAACGCCTTCCACATGTTGAAAGATAAGTTGACCCATGCACCTCTCCTCCAACTTCCCGATTTTACTAAGACTTTTGAACTTGAATGTGATGCTAGTGGGATTGGATTGGGTGGTGTTTTGCTACAAGAAGGAAAACCTGTTGCATATTTTAGTGAAAAGTTGAGTGGGCCTGTTCTGAATTATTCTATTTATGATAAGGAATTGTATGCTCTTGTGCGAACTTTAGAAACATGGCAGCATTATTTGTGGCCCAAGGAATTTGTCATACATTCTGATCATGAGTCTTTGAAGCATATTCGTAGTCAAGGGAAGCTGAACCGTAGACATGCTAAATGGGCTGAATTTATTGAATCTTTTCCTTATGTTATCAAACACAAGAAAGGGAAGGAGAACATCATTGCTGATGCTTTGTCTAGGAGATACACTTTGTTGACACAACTTGACTACAAGATTTTTGGCCTGGAAACAATCAAAGACCAATATGCGCATGATGCTGATTTTAATGATGTGTTGCTGCGTTGTAAGGATGGAAGAGCATGGAACAAATTCGTCATCAATGATGGGTTTGTTTTCAGAGCTAACAAGCTATGCATTCCAGCTAGCTCCATTGTGTATGGTTTGTTGCCTCGTGCTCCAATTGATTTGATGCCTTTACCATCTTCTGAAAAACTGAATTTTGATGCTAAGCAACGTGCTGAGTTGATGTTAAAACTGCATGAGACAACTAAAGAAAACAACATAGAGCGCATGAATGCTAAGTATAAGTTTGCTGGTGACAAAGATTTCGGGGTTAGTCCCACATTTAACGTTGCAGATTTGAAGCCGTATTTGGGAGAAGAAGATGAGCTTGAGTTGAGGACGACTCAAATGCAAGAAGGGGAGGATGATGAGGACATCAAAACCATCGATACATCCACGTCCCCCCATGTACAGCATGATGGTCCTATTACCCGCGCTCGTGCACGTCAACTAAATTATCAGGACGAGTGCCCTCGTGGCCGGGTTGACGCGCACCACAAATTCGCGGCGACCATTGGAGACGGTGTATCGGTTGCTAAGGCGCAACGTCTTTGGACAGTTGTAGTCGGGTCGTGA
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| Protein seq | MVAGGGHRRGPAAAERECKGRGKEAAVHGATTATEEATGVEGGGGAAQVDGDGSVPAVGELGKAVDGVGGGAAKPEETTPRRGTVPASGWAQPEVDGNGREREDDGAGANPMGRRGGKRRKLTRKDECPRGRVDAHHKFTTTIGDAHQQLHHKPDYSLTGLVATAPIHLVPRLLTCGLLSPSCGQGLETAVARIDTSLAALVRHFDALNAGGNGGGNDDDIDGEYVEDNLEDEYIADTEQDDRDARDRRRLHNNRRDNEPPEEHIGAAFADHYESLIVQRVLSAQMEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMSPEDILRDDVAKAANSKCESDKKVQSDGKKPETINLKPKCLLATKSDINELIASPSVAYTLEYSDVFPKEVPPGLPPVRGIEHQIDLIPDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFTKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSIYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWAEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLRCKDGRAWNKFVINDGFVFRANKLCIPASSIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENNIERMNAKYKFAGDKDFGVSPTFNVADLKPYLGEEDELELRTTQMQEGEDDEDIKTIDTSTSPHVQHDGPITRARARQLNYQDECPRGRVDAHHKFAATIGDGVSVAKAQRLWTVVVGS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g21960 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0014741 | SBH | 0.0 | 0.210491 | 0.223320 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0171000 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0157900 | SBH | 0.0289535 | 0.530256 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Os XI: R9311 | R9311 | AGIS | NA | NA | NA | NA | NA |
| Os XI-adm: HZ | HZ | PKU | OsHZ_11g0042100 | SBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_11g0041600 | SBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_11g0042500 | SBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_11g0121500 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G1121290000.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G1134678000.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G1131843300.01 | SBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G1133467400.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG1125197000.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G1129768200.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G1129135000.01 | SBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G1122677800.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G1120907600.01 | SBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G1180003160.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G1125336000.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G1133687500.01 | SBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G1180003005.01 | SBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG1130703400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G1118666700.01 | SBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG1120935800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG1122053400.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG1129536600.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G1119919200.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0510480200.01 | SBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G1142414800.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG1180002378.01 | SBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG1180002730.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG1119890400.01 | SBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G1124763000.01 | SBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG1180002349.01 | SBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G1129808200.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G1128125400.01 | RBH | None | None | None |
