Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0144200 | OGI:12027890 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr12:9451298-9459664 | ||||||||
| Gene Symbol | OsDLN256,OsC3H65,C3H65,DLN256 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_OTH1218270,Y58S_MH63RS3_OTH1209070,128077_MH63RS3_OTH1215430,127652_MH63RS3_DEL1214260,S548_MH63RS3_OTH1209580,CN1_MH63RS3_OTH1207710,DG_MH63RS3_OTH1209320,DHX2_MH63RS3_OTH1216750,127518_MH63RS3_OTH1210300,XL628S_MH63RS3_OTH1208100,IR64_MH63RS3_OTH1210250,HZ_MH63RS3_OTH1208620,132424_MH63RS3_OTH1207700,WSSM_MH63RS3_OTH1207950,LK638S_MH63RS3_OTH1208290,R527_MH63RS3_OTH1209280,G8_MH63RS3_OTH1209990,TM_MH63RS3_OTH1210260,127564_MH63RS3_OTH1208540,J4155S_MH63RS3_OTH1207740,ZS97RS3_MH63RS3_OTH1208600,132278_MH63RS3_OTH1219910,G46_MH63RS3_OTH1209500,J4155_MH63RS3_OTH1209160,117425_MH63RS3_DEL1215500,YX1_MH63RS3_DEL1212380,Azucena_MH63RS3_OTH1219040,125827_MH63RS3_OTH1209360,
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| DNA seq | CCTACATACAGTAATCAAGACTGAGGGAGTGGGCGTCCGTACCCATCAACGCCCTTGAAAATCAGTAGCCGCTCAAAGAAAAAAAGAAGTATGGAGGCAGCCATTCCTTTGGGCTTTTTAGGCTGCCAGTCCCCTGTTTAACATGTTGGTAGCTAGGAGTACCATATGCTCCTGTCGTACTTATTAGTGCAGTCAGCACTAACAGATTCCCTAAGATGATCATGTGATCATCACATAACTTCAATGTGATGACAAGTTCTGATACCTGATTTGATGAGTGAGACACAGATAGTGGTAGACCAGCATATTCCTTTCCTCGGCCCGAGGAAAAAAAAGGCTAAGGGGCGTACGGATCAAACCAAACTGCCCGTCAACTCTCCCTTTAGTCCACGACATGAACGGTAAACCCGGGTGTCATGGAAGATGTAAAACTGCAATATGGGATTCAGCCCGACGCCATAGTTGTATACTAAACGCGACGATGCTGTACAATGTAAAGAGTTTTGACAGGTTTTGTTTAATTTCATGAATTCCAGCGGCAATGTACCCAGCTTGATGCAACTTCGTTGCCACTTTCCAAGCCAGATCTCTCCCACTGTCAGTGAGTGAACCCACGTACAGCTTTCAGCTACGCTATCTTACAAGTGAAGTTATTACAAGCATCACGGCGACGATGAAAAATCGCTCGTGCCTGCTTCAGAGAGTGTAGTTTCCTGGAGTTGGGTATTGAGCAGGGAGGAGAGGAGGTCCCGCTGCAGGTACAGGGCTAAAATTGAAGGGGTGATTGTATGCGCAAGCTGGCCCAAATTTGCAGACCCCATAGCGACCATAGTATGTGCACACAGGCTGATCCTGAAACAAATATGGCAAGAAATAAAACATTAAAAAAATAGCGATCAAGCATTATCTGATTTAGATTGCAAATGATGGGGTCAGAAGAGGTAAACAAAAATAAATCATAAGTTATTAGCATAGAGTTGTCAGTTAACAACAGCTGCAACCATCAGGAATAGAGTTTATAGCTTAAACTAAAGTGAGTTAACTCTATTCTTTTAGTCTAAAATATGTACAAAATGTCTTAGCTATAATAATCTTAATCTAACCCCACCTCCCAACTTAAGAATTTTTTGAACTAGAGATACCAAACCTGGGGTTGAAGCTGTAACAAACAGTCCCAACAGAGCTAAATGAATGATATCACCTAAAATTGAGGAAATAAATGGAAGAAGGAACATACAGGTTTTATAGGCAAGCCAAGAGGGCTAAGAGCTCCTGCTGGAGGCACCGGTGACCTTGGGTGGTGATATTTGCACTTCATCCTAAATTTGCAAAAACCACTCTTCACAAAATGCTGACATTCAGGTTGGCCAGGTCTCTCTGGGTATTCCTCGGAAGGAACCTGCTGATGTCCAGGTATTTCTGGTGCCTTGTACATAGGATGATTTATAGGAGCAGCTGGAAAATGTTGGAAAGGGACTCCAGGAGGATAATATGGATTCAACGGAACCTGAAAAGGAAATAGTTACACGTGAAATTGTTACCCAAGATAATGTATCAATTGTAAAGAAAGGTGCTTTCTCGAAGAAGACATTTGAAGGATAAACTGGAGAACTGGACTAATAGAAACATAATTCCTATGTACTTGTCCGAGAAATGGCAGCCAACATATAAAATCTGATCACATTCCAATACATAAAAGTAACTCGACATGGAAATGTATTTGGCAAATTTGTATCAAGCATTCAAATGCACCTCATACATCCTATTTTCAATATTGTTTTGCAACATATGATTTAATTATGTAACAATCAAAAAACATACGTTAAGGACCACAATTACAAGTAAAAAGGAATGGAGGGTACTATCTTCCTTGATTTCAGCCAGGAAATTTCTAGTTAATATTGGAAAAAGTAATAATAGCCAATTTCTAATGCAATTTTACAAATTTCAATTAGTTCTTATAAGAAAGTCGACAGAAAGAAGTCAGCAAAACATGCCAATATGCTCAATTTTCACTTCAACGAAAAGCAACTTGCAATATTTACTCCGTCCATCTGAGATGGAGCGGAGAGAACATTTTGGCATCATAGGTGAATCTTTAATTTACCTGATGATACCCATTCCATTCAGGAGGTGGATACATTCCTTGAGGAGGAAGCATCCCTGCACTGTACGATGGAGATGGAGCTATAAACGGAACATGATGCTCATTCACTGTTCTCTGATCGGGCCAAATTGAAGCATTTGGCTGAGACGATGATCCTTGAACATCTTGCTGTGGAGCATCCCCATTCTCATGCTCCAACTGTGGATCTTTAGAAGCAACATTAGAAGGATCAGGATGGTGAAACTTGCAGTTAGTGGCGTACTTGCAGCTCCCAGTACGCATGTAGTAGGGACACTCCTTTTCCCCCTGCAAGATTAACACCACAATTGTATAGAAAAGGAATATTTAAGAAATGACTATTAATATCATGAACATATTTATTGCACACTGCTGTAAAAATTAAGTGCAATCATGAAAATCACTCTGGTTTGGCACCAAGTCAGCACAACTCTGAAAAGATCTTAGGTACAATATTTGTCCTGTGGTAATTATTTTAGTTTGCAAACCTATGGATCAGTTTACAGGAGTAAAAGGAGAGTTATAGTAGCATGTACTCTTTTCTCATCAAATTTACAATTTGACAAAACTTACTTTTTGCAAACATAACAATTAATAAATTTATAGATATATTGACAGCTTTCTAGTAGGTTTCATTCCATTAACCAAACAATTGTCCAAGCCTACCATACTTTAGTTTCTGAGGTTTACTTGTCAACTTACGAACTTATAATACCCAAACTGAAGAGGTTTACATGATCACAGTCACACCCAATGGTGGATACAGAATAAAAATGACAAGGTATCCTGTAGATATTAGAACATGTCTAATACTCTAATTATCGAGAATTGTTTTAGTAAATAGCAATGGTTAAAACAACTAACAATAGAAATCCCAATCAGTGTCCAGTGCACTGGCATATGATTAGATCAGCAGTAGTTGCTCTATCCCTGATTGAACCTAGTTATTGATTTATGTGATTGCATGAGGCATCCCATAACACCAGTACAATGTATGGATCACACATACATAAATAAAGCCCACAGATAGCCTGATAGGGTAACCATAAACTCAACTAGAGTATTTAAGCTTGACAAACAAATGAAAGACTTACTGGACGAAGTGGAAGACCGAGAAAGTTCAGGTCAACCTTTTCAGCGTCTGTTTTCCCTTCTTTTCCATCACGGTGGAGGTATTTACAAGCTTTACCAAATTTGCATCCTCCAGGTGTTGAATAATACTGAAAAGGGTTAAAAAAAAGACTCAAGGGACAAGGAATATCTTTGTAATGAAAGATCTACAAAATTGGCGGCCTTAGATTACAATGGGGTGCTCGAGTGTGTACAGAAAACTATGGTAGCATGCTAGGATCAACTATGGTGACAAAACAAAATTAACTTACAGAAATATAGCAATACAATGAAGAAATTTACTAAAGAATATGTAAAAGAACACTAGAGTTGATATAAATAATTTGTTGTACGTTCATGGCATGTTACCAAAGGCCTGTTTGGGGGAGCTTTAGATTCTGAGAAGCAGCTGGTGAGAATCTGGCTTATAGTTCATTTTCTGGATTCTACAACTACAGCTTCGCAGAATCTAAATGAAAAGTTGGACTGTTTGGGGGAGCTTTTGATTCTGGAAGAAGCTACAGCTGTCAAAAACTCCCGAAACAAGCCCTAAAACTTATGTTCTGGTGTAGCAACCTATGTTATCAAGGCATCATCTAAGTGACGCCATGGCATCCAGGTGGCAACAAGAAGACAAAATGTCCCTTCACCTAAGTCCCACCAGTTAAGTTAGCACCTAAATGAACTGGGCACCAGAACCACCATGATTGGTCCAAGGGTAAGAACCCCTTCAATTTATTGGTTCATGGAATTGGAATGGTTGGTTTCAGGGAATAGAAGAGAGAAAACAATTGTGAAATTTTAGGGAGTTGAGAAACATGCAGAGCAGAGGAACACTAGCCACTGCAAGCGCCTTTCTACAATCACCCATTCACCCTTGCGACCAGCTCAGTTGTTCTTCCACTTCTGCTACTTCCTCTGGCTCACACTCTTGTAAGCTCTTCCTCCGCCTCTTCTCCACTATTCCTCCATTGCATGCTATGACTCTGTTGTGCTCTTCCTCTGCCTCTTCATCTGCCTCATGATTTGCTATGCTGATCTCCTACATGCCGTCCTCTGCTTAGCTGGTTTGCTTTGCTTTGCTTTAAAATTTGGCTCTCATGTTGCTCTGATCTCCGCTCTGTGCTGCTATTCTACTCTGCTGAATAGCTCACCTTGATAACACATAGGTTGTTAGGCTATCAGAGACACCAGTGACCAGACACAGGATTCAGCCATCCATTCCATTGGTTGACTGCTCCAGACCACAAGCACATGTACAATGCATGGTATATGGGGTTGTTTAATGCCCCCAAATAAGCTGTGAAGATTAACAGATTTACTGATCCCAAATTATTTTCTCCAAGTATAAAACCAAAAAGAGTAATGCAGCTTCATTACTTTACTAAAATGTACCCCCTCTGGTTCCATAATTCTTCTTGTTTGGGACAAGATTGAGGTCAGACTATCAGAACTTTGACTATCAATAGCTTTAAAAATATTTTAGTTTGAAGGCATTAGAACATGTATAGATTAGTCTTAAAAAGTTAAATATTTATTTATTGTACATATTATAGTAGAAAATTCATAATCAAAGATATGTTTTGGAGACCATGTCGTTGTCCAAAACAAGAAGAATTATGGAATCGGATGGAGTGGTCAATAAGATAAACCACATGCTCAACCAGGTTATTCAGACAAGCCTAATCACCTTACCCCTAAACCTTCGATTTATAAAATCTACAGAACATTTAGGACGGATTTTCAAGGAACTGAAAGTCTGTACATCATAATATCCAGTACAAGGAATTTTCAGCTGTTAATATTACATGGCCCCTATGCTTTAAGAGCAAAATTGATCAAAGACTTATCGATAGGGTGAAAGATCACTAACAAACCTTGCATTCCTCCTGGGAACTACCTTCTGAAATAAATTCCTTCCTTTTCTCTTTGGCAACCTTCAGTACCTCGCAGAAAAAGAAGATAGTATAATCAGGAGATAATAAAATGAAGACTTTATACAAAATACAGATCAACCAAAAGGTTATAACATCCTAGATAAAACCAGAATTTTGCATGACAATGAGGTTTGTTATCATGTAAGTACAGCAAATATATAAATTTGTTAGTTCAGACTCAGTTACAGGAGGCATGAAGGACGCAATTTGCTACAAGAAACCCAGTATATATAGATATGAAGGTATGGGGAAAAAAGAAAATCCCATAATACAACATTATAAGGCAGATAAAAAAATTTAACACAAACAATGGACATTTTACAAAAGGATGACCAGCTGACCATCAAGGTGCTGCCAAAGGGGCTTCAATAATATAAAAATTGCGAACATTTTAATATATTTCATCTAACTTCATCAAACAAATTAATTTCTCAATATCCTCCACAATCAACCAACAAAAGATATGACAATTTTGAAAATTCAAACTACATTTCTCAAGCAACTCAAAAGAGTTCATTCATATTGTATAATGCCAATCACACAGCAGCAACAGCTAACCTTAAGTTCCTTTGGCTCCACTCTTCCCTTCTTCACATCGATAATCTGCAACAAAGAAAAACAGAACACATCAAACATTGTGATACTTTCAATTTCTAGCTATGAATGCATGTATAAAATTGGAATTGCTTTCACAGGTTGAATGGCGTAAAATGTAAATCACCTCCATAACAATCACACCTCACTAAGAGGCAAGTATCTTGAGTCTCAACCATTAATAGATACATCTCAAATAAATTACTTGATATGCTGAAAGGAAATTCTGGTTGCTAACCTCATAAGAATATTTCTTAAAGTTTTCTAAGTTAGACGCACTCCCCTTGTCAGCAAATCCCTACGAGAAAATAAGATATTAACATTAGATAATTATTATAGAAAAGGAAAAAAATAAATAAATTGTGCATCTAATAGTTAATTCTGCAAACGTGCTTGTAGCATGGTGGTAATGCCTTCCAGTGGAAAGCTACTGACCAGGGTTCAAATCCTGGTCTCGCACAAAAGAAAAGGTCACTTGTTGGTTCCCCCAAAAACATGGGTAGAATCGCCAAATGGAAGGCGTGCCCTCGTGTGTGGGGTAGGGACCTCAAAGCATGGGTTAAGGCCCAATCCATAGGGAGCGACTCATCGTGTAGGGGGGACAAGCTTTTGTGGCCTTTCTCAGCCCCAGTTTTGGGTGCCTCTTCTTAATTGAAAGACCTCAGGGGAGGTCTTTCCCCTTGGGGCCAAGTTTTTCTAATAGCTATCTGAACTTCACAGTTCAAGGTGGTTGATTCATCACCGAAATTAGCGACACCTAGGTATGCCAGTATGGCATGCCGTGCTTTTCAGGACAACCATTTTGGTGCAATGCCTATGCAGTTACATCCAAACTAGTCAATTCATGATGGTGGACACAGATTTGTACAATATTAAAAATATTGCCGAAGTGTCAACGTGCAAGGTGGTGTACTACAACACAGCTTTTGAAACCATTTTCAACTGCTTTTCAATCACTTGGACACAGTACAGACACTAGCTTTAGTCATCAATGAATTCGGCGTTACTCCTTCACATTCAATTATAGAATAAAGTAAAGATGACGCACCAAAGAATCAACTTCAGGTGAAATATCTGGAACATAGCTTCCGTATTCCTCTTTTGGAGCCTGCTGGAAAGTTAAATTCAATAACAGAAAGGCGAATTAAATTTTACTGAAGAAAAAAAATCGTTATTTGCTATCAAGTGTTAACTTAATATCTTATCCACCATCCAAATTTGCCGTTCCCTTGTTTTCCACTCTTTAATTTTTGTCCACCCTTATTGGCCACTTCCATCAACTCCGTGTAAGCTAAGTGTTTAACACTTGTTTGTCTTTTAAACATTTAATAGGCCACACATCTAGTTTATAGCAGCATGGATATGGTAGAACCATGAATATCCACCGCGAAAACACGACATATGGTGACTGAAATTTATGTGAAAATTTAGCAATTTATTAGACCTCCATAGCATCAAAACTAATTGCATTCAGATCACACAACTTATATGAACAACATGGCAACATAAGCTCCGTGCACTCCAATTATTCATCATATTAGTTTCATTTACCCGCTTTCAAGACAAAAAAAAAACAGTGTATTTGCATGCTGCAACATAATAATACAATAGAAAAGACAACAAGCCCAAGCAACGTGCCAAATCAAGACAGACATGCATGCGCTGAATAGCTGAAGTAAAACACGAGGCATAAAAAGCGCTAATCACCTGCTCATCATCAGGCGAGGAGGCTTTGTTACTGCTGCTGTTGCTCCCGCCGCTGCCACTACCACCGTTACTACCTTTCACCTGTACACACGCATGCAGAGACAAACAAACAAAAACAACGCGAAGTCACGGACACATGAGAAAAACCCACTCACAAAAGTCGTCTCCGTCTCACCCATCCGCAAACCACCAAACCCCAACTCGCCATCACCAAAACCAGATCAAAACGCCCTCATAAAAAAATTAAAAAAACCCCCTAAAATCGCGCAAAATAATTAAACAACTAGCTCCAACACCAATCCACCCACCCTACTCTTCTTCTTCCTCGCCGGATGATTGAACTTGCACTTCATCCCAAAGCGGCAGCTCCCGAACTTGACGTAGTAGGTGCAGTCCGGCTCCCCGGGTCGCCTCGGGAACCGCGGCCTCGAATCCGCCGCAGCACCCTCCACCCCCACCGCCGCCGCCACCTCACCCGGCAGCTTCTCACCACCGGAGACCTCATCTCCAGCAACAACAACAGGGCCATCCTCCCAGCCGGTGGGCTTGGGAAGCAGCAGCTCCTCCCCCTGATCGGCGATGGCGAGTCCGGCGAGCTGCTCCTCCACCTCCACCTCGACCTCCACCTCGTCCTCCCCGGCGGCGGGGGCGGCGGAGGAAGGGGAGATCGAACCGATCGGCGTGGCGCCGGGGTCCGATTTGGGCGGGGCCCTCGCGTCGGCGTCCGCCATTGGCCTCTCCTCGGAGGTGGAGACTGGAGAGAGAGAGAGGAGAGAGAAGGGATGGTGATGGAGACGAGAGCAGGTGGGGGAAGAAGCGAAGCGAAGCAACGAAAGTGGGGAAAAACCCTAGAGAGAGAAAGCGAGACCCGCGTCCGTGGGTCCCCCCCTCTCC
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| CDS seq | ATGGCGGACGCCGACGCGAGGGCCCCGCCCAAATCGGACCCCGGCGCCACGCCGATCGGTTCGATCTCCCCTTCCTCCGCCGCCCCCGCCGCCGGGGAGGACGAGGTGGAGGTCGAGGTGGAGGTGGAGGAGCAGCTCGCCGGACTCGCCATCGCCGATCAGGGGGAGGAGCTGCTGCTTCCCAAGCCCACCGGCTGGGAGGATGGCCCTGTTGTTGTTGCTGGAGATGAGGTCTCCGGTGGTGAGAAGCTGCCGGGTGAGGTGGCGGCGGCGGTGGGGGTGGAGGGTGCTGCGGCGGATTCGAGGCCGCGGTTCCCGAGGCGACCCGGGGAGCCGGACTGCACCTACTACGTCAAGTTCGGGAGCTGCCGCTTTGGGATGAAGTGCAAGTTCAATCATCCGGCGAGGAAGAAGAAGAGTAGGGTGAAAGGTAGTAACGGTGGTAGTGGCAGCGGCGGGAGCAACAGCAGCAGTAACAAAGCCTCCTCGCCTGATGATGAGCAGGCTCCAAAAGAGGAATACGGAAGCTATGTTCCAGATATTTCACCTGAAGTTGATTCTTTGGGATTTGCTGACAAGGGGAGTGCGTCTAACTTAGAAAACTTTAAGAAATATTCTTATGAGATTATCGATGTGAAGAAGGGAAGAGTGGAGCCAAAGGAACTTAAGGTTGCCAAAGAGAAAAGGAAGGAATTTATTTCAGAAGGTAGTTCCCAGGAGGAATGCAAGTATTATTCAACACCTGGAGGATGCAAATTTGGTAAAGCTTGTAAATACCTCCACCGTGATGGAAAAGAAGGGAAAACAGACGCTGAAAAGGTTGACCTGAACTTTCTCGGTCTTCCACTTCGTCCAGGGGAAAAGGAGTGTCCCTACTACATGCGTACTGGGAGCTGCAAGTACGCCACTAACTGCAAGTTTCACCATCCTGATCCTTCTAATGTTGCTTCTAAAGATCCACAGTTGGAGCATGAGAATGGGGATGCTCCACAGCAAGATGTTCAAGGATCATCGTCTCAGCCAAATGCTTCAATTTGGCCCGATCAGAGAACAGTGAATGAGCATCATGTTCCGTTTATAGCTCCATCTCCATCGTACAGTGCAGGGATGCTTCCTCCTCAAGGAATGTATCCACCTCCTGAATGGAATGGGTATCATCAGGTTCCGTTGAATCCATATTATCCTCCTGGAGTCCCTTTCCAACATTTTCCAGCTGCTCCTATAAATCATCCTATGTACAAGGCACCAGAAATACCTGGACATCAGCAGGTTCCTTCCGAGGAATACCCAGAGAGACCTGGCCAACCTGAATGTCAGCATTTTGTGAAGAGTGGTTTTTGCAAATTTAGGATGAAGTGCAAATATCACCACCCAAGGTCACCGGTGCCTCCAGCAGGAGCTCTTAGCCCTCTTGGCTTGCCTATAAAACCTGATCAGCCTGTGTGCACATACTATGGTCGCTATGGGGTCTGCAAATTTGGGCCAGCTTGCGCATACAATCACCCCTTCAATTTTAGCCCTGTACCTGCAGCGGGACCTCCTCTCCTCCCTGCTCAATACCCAACTCCAGGAAACTACACTCTCTGA
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| Protein seq | MADADARAPPKSDPGATPIGSISPSSAAPAAGEDEVEVEVEVEEQLAGLAIADQGEELLLPKPTGWEDGPVVVAGDEVSGGEKLPGEVAAAVGVEGAAADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSPDDEQAPKEEYGSYVPDISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEPKELKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPVPAAGPPLLPAQYPTPGNYTL |
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| Function | Zinc finger CCCH domain-containing protein 65 [UniProtKB/Swiss-Prot:Q2QTY2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0144200 | OsMH63_12T0144200.1 | Chr12 | 9451298 | 9459664 | - | maker | ||
| CDS seq | ATGGCGGACGCCGACGCGAGGGCCCCGCCCAAATCGGACCCCGGCGCCACGCCGATCGGTTCGATCTCCCCTTCCTCCGCCGCCCCCGCCGCCGGGGAGGACGAGGTGGAGGTCGAGGTGGAGGTGGAGGAGCAGCTCGCCGGACTCGCCATCGCCGATCAGGGGGAGGAGCTGCTGCTTCCCAAGCCCACCGGCTGGGAGGATGGCCCTGTTGTTGTTGCTGGAGATGAGGTCTCCGGTGGTGAGAAGCTGCCGGGTGAGGTGGCGGCGGCGGTGGGGGTGGAGGGTGCTGCGGCGGATTCGAGGCCGCGGTTCCCGAGGCGACCCGGGGAGCCGGACTGCACCTACTACGTCAAGTTCGGGAGCTGCCGCTTTGGGATGAAGTGCAAGTTCAATCATCCGGCGAGGAAGAAGAAGAGTAGGGTGAAAGGTAGTAACGGTGGTAGTGGCAGCGGCGGGAGCAACAGCAGCAGTAACAAAGCCTCCTCGCCTGATGATGAGCAGGCTCCAAAAGAGGAATACGGAAGCTATGTTCCAGATATTTCACCTGAAGTTGATTCTTTGGGATTTGCTGACAAGGGGAGTGCGTCTAACTTAGAAAACTTTAAGAAATATTCTTATGAGATTATCGATGTGAAGAAGGGAAGAGTGGAGCCAAAGGAACTTAAGGTTGCCAAAGAGAAAAGGAAGGAATTTATTTCAGAAGGTAGTTCCCAGGAGGAATGCAAGTATTATTCAACACCTGGAGGATGCAAATTTGGTAAAGCTTGTAAATACCTCCACCGTGATGGAAAAGAAGGGAAAACAGACGCTGAAAAGGTTGACCTGAACTTTCTCGGTCTTCCACTTCGTCCAGGGGAAAAGGAGTGTCCCTACTACATGCGTACTGGGAGCTGCAAGTACGCCACTAACTGCAAGTTTCACCATCCTGATCCTTCTAATGTTGCTTCTAAAGATCCACAGTTGGAGCATGAGAATGGGGATGCTCCACAGCAAGATGTTCAAGGATCATCGTCTCAGCCAAATGCTTCAATTTGGCCCGATCAGAGAACAGTGAATGAGCATCATGTTCCGTTTATAGCTCCATCTCCATCGTACAGTGCAGGGATGCTTCCTCCTCAAGGAATGTATCCACCTCCTGAATGGAATGGGTATCATCAGGTTCCGTTGAATCCATATTATCCTCCTGGAGTCCCTTTCCAACATTTTCCAGCTGCTCCTATAAATCATCCTATGTACAAGGCACCAGAAATACCTGGACATCAGCAGGTTCCTTCCGAGGAATACCCAGAGAGACCTGGCCAACCTGAATGTCAGCATTTTGTGAAGAGTGGTTTTTGCAAATTTAGGATGAAGTGCAAATATCACCACCCAAGGTCACCGGTGCCTCCAGCAGGAGCTCTTAGCCCTCTTGGCTTGCCTATAAAACCTGATCAGCCTGTGTGCACATACTATGGTCGCTATGGGGTCTGCAAATTTGGGCCAGCTTGCGCATACAATCACCCCTTCAATTTTAGCCCTGTACCTGCAGCGGGACCTCCTCTCCTCCCTGCTCAATACCCAACTCCAGGAAACTACACTCTCTGA
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| Protein seq | MADADARAPPKSDPGATPIGSISPSSAAPAAGEDEVEVEVEVEEQLAGLAIADQGEELLLPKPTGWEDGPVVVAGDEVSGGEKLPGEVAAAVGVEGAAADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSPDDEQAPKEEYGSYVPDISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEPKELKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPVPAAGPPLLPAQYPTPGNYTL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0144200 | OsMH63_12T0144200.2 | Chr12 | 9451694 | 9459632 | - | maker | ||
| CDS seq | ATGGCGGACGCCGACGCGAGGGCCCCGCCCAAATCGGACCCCGGCGCCACGCCGATCGGTTCGATCTCCCCTTCCTCCGCCGCCCCCGCCGCCGGGGAGGACGAGGTGGAGGTCGAGGTGGAGGTGGAGGAGCAGCTCGCCGGACTCGCCATCGCCGATCAGGGGGAGGAGCTGCTGCTTCCCAAGCCCACCGGCTGGGAGGATGGCCCTGTTGTTGTTGCTGGAGATGAGGTCTCCGGTGGTGAGAAGCTGCCGGGTGAGGTGGCGGCGGCGGTGGGGGTGGAGGGTGCTGCGGCGGATTCGAGGCCGCGGTTCCCGAGGCGACCCGGGGAGCCGGACTGCACCTACTACGTCAAGTTCGGGAGCTGCCGCTTTGGGATGAAGTGCAAGTTCAATCATCCGGCGAGGAAGAAGAAGAGTAGGGTGAAAGGTAGTAACGGTGGTAGTGGCAGCGGCGGGAGCAACAGCAGCAGTAACAAAGCCTCCTCGCCTGATGATGAGCAGATTATCGATGTGAAGAAGGGAAGAGTGGAGCCAAAGGAACTTAAGGTTGCCAAAGAGAAAAGGAAGGAATTTATTTCAGAAGGTAGTTCCCAGGAGGAATGCAAGTATTATTCAACACCTGGAGGATGCAAATTTGGTAAAGCTTGTAAATACCTCCACCGTGATGGAAAAGAAGGGAAAACAGACGCTGAAAAGGTTGACCTGAACTTTCTCGGTCTTCCACTTCGTCCAGGGGAAAAGGAGTGTCCCTACTACATGCGTACTGGGAGCTGCAAGTACGCCACTAACTGCAAGTTTCACCATCCTGATCCTTCTAATGTTGCTTCTAAAGATCCACAGTTGGAGCATGAGAATGGGGATGCTCCACAGCAAGATGTTCAAGGATCATCGTCTCAGCCAAATGCTTCAATTTGGCCCGATCAGAGAACAGTGAATGAGCATCATGTTCCGTTTATAGCTCCATCTCCATCGTACAGTGCAGGGATGCTTCCTCCTCAAGGAATGTATCCACCTCCTGAATGGAATGGGTATCATCAGGTTCCGTTGAATCCATATTATCCTCCTGGAGTCCCTTTCCAACATTTTCCAGCTGCTCCTATAAATCATCCTATGTACAAGGCACCAGAAATACCTGGACATCAGCAGGTTCCTTCCGAGGAATACCCAGAGAGACCTGGCCAACCTGAATGTCAGCATTTTGTGAAGAGTGGTTTTTGCAAATTTAGGATGAAGTGCAAATATCACCACCCAAGGTCACCGGTGCCTCCAGCAGGAGCTCTTAGCCCTCTTGGCTTGCCTATAAAACCTGATCAGCCTGTGTGCACATACTATGGTCGCTATGGGGTCTGCAAATTTGGGCCAGCTTGCGCATACAATCACCCCTTCAATTTTAGCCCTGTACCTGCAGCGGGACCTCCTCTCCTCCCTGCTCAATACCCAACTCCAGGAAACTACACTCTCTGA
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| Protein seq | MADADARAPPKSDPGATPIGSISPSSAAPAAGEDEVEVEVEVEEQLAGLAIADQGEELLLPKPTGWEDGPVVVAGDEVSGGEKLPGEVAAAVGVEGAAADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSPDDEQIIDVKKGRVEPKELKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPVPAAGPPLLPAQYPTPGNYTL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0144200 | OsMH63_12T0144200.3 | Chr12 | 9451298 | 9459664 | - | maker | ||
| CDS seq | ATGGCGGACGCCGACGCGAGGGCCCCGCCCAAATCGGACCCCGGCGCCACGCCGATCGGTTCGATCTCCCCTTCCTCCGCCGCCCCCGCCGCCGGGGAGGACGAGGTGGAGGTCGAGGTGGAGGTGGAGGAGCAGCTCGCCGGACTCGCCATCGCCGATCAGGGGGAGGAGCTGCTGCTTCCCAAGCCCACCGGCTGGGAGGATGGCCCTGTTGTTGTTGCTGGAGATGAGGTCTCCGGTGGTGAGAAGCTGCCGGGTGAGGTGGCGGCGGCGGTGGGGGTGGAGGGTGCTGCGGCGGATTCGAGGCCGCGGTTCCCGAGGCGACCCGGGGAGCCGGACTGCACCTACTACGTCAAGTTCGGGAGCTGCCGCTTTGGGATGAAGTGCAAGTTCAATCATCCGGCGAGGAAGAAGAAGAGTAGGGTGAAAGGTAGTAACGGTGGTAGTGGCAGCGGCGGGAGCAACAGCAGCAGTAACAAAGCCTCCTCGCCTGATGATGAGCAGGCTCCAAAAGAGGAATACGGAAGCTATGTTCCAGATATTTCACCTGAAGTTGATTCTTTGGGATTTGCTGACAAGGGGAGTGCGTCTAACTTAGAAAACTTTAAGAAATATTCTTATGAGATTATCGATGTGAAGAAGGGAAGAGTGGAGCCAAAGGAACTTAAGGTTGCCAAAGAGAAAAGGAAGGAATTTATTTCAGAAGGTAGTTCCCAGGAGGAATGCAAGTATTATTCAACACCTGGAGGATGCAAATTTGGTAAAGCTTGTAAATACCTCCACCGTGATGGAAAAGAAGGGAAAACAGACGCTGAAAAGGTTGACCTGAACTTTCTCGGTCTTCCACTTCGTCCAGGGGAAAAGGAGTGTCCCTACTACATGCGTACTGGGAGCTGCAAGTACGCCACTAACTGCAAGTTTCACCATCCTGATCCTTCTAATGTTGCTTCTAAAGATCCACAGTTGGAGCATGAGAATGGGGATGCTCCACAGCAAGATGTTCAAGGATCATCGTCTCAGCCAAATGCTTCAATTTGGCCCGATCAGAGAACAGTGAATGAGCATCATGTTCCGTTTATAGCTCCATCTCCATCGTACAGTGCAGGGATGCTTCCTCCTCAAGGAATGTATCCACCTCCTGAATGGAATGGGTATCATCAGGTTCCGTTGAATCCATATTATCCTCCTGGAGTCCCTTTCCAACATTTTCCAGCTGCTCCTATAAATCATCCTATGTACAAGGCACCAGAAATACCTGGACATCAGCAGGTTCCTTCCGAGGAATACCCAGAGAGACCTGGCCAACCTGAATGTCAGCATTTTGTGAAGAGTGGTTTTTGCAAATTTAGGATGAAGTGCAAATATCACCACCCAAGGTCACCGGTGCCTCCAGCAGGAGCTCTTAGCCCTCTTGGCTTGCCTATAAAACCTGTATGTTCCTTCTTCCATTTATTTCCTCAATTTTAG
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| Protein seq | MADADARAPPKSDPGATPIGSISPSSAAPAAGEDEVEVEVEVEEQLAGLAIADQGEELLLPKPTGWEDGPVVVAGDEVSGGEKLPGEVAAAVGVEGAAADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSPDDEQAPKEEYGSYVPDISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEPKELKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPVCSFFHLFPQF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.3802015 | 34.90144 | 53.9172785 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0278800 | RBH | 2.506750 | 2.495512 | 9.135221 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g18120 | RBH | 1.617368 | 1.652717 | 2.281104 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0278800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0009360 | RBH | 0.928889 | 36.448795 | 10.386044 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0009550 | RBH | 0.320203 | 8.957328 | 5.253174 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0009490 | RBH | 1.373430 | 17.793621 | 16.993647 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0009300 | RBH | 0.173123 | 0.562818 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0009180 | RBH | 2.843123 | 24.408726 | 27.904825 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0009200 | RBH | 0.238887 | 1.923993 | 1.761842 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0158900 | RBH | 8.753215 | 41.3736705 | 30.062002 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0009120 | RBH | 0.388382 | 0.535800 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0009330 | RBH | 0.713117 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0009320 | RBH | 2.537036 | 92.188194 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0009280 | RBH | 0.889040 | 0.0 | 2.489697 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0009410 | RBH | 0.087716 | 14.511694 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G009170 | RBH | 0.154652 | 6.433628 | 5.526873 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0009070 | RBH | 1.272519 | 28.773783 | 11.796848 |
| Os XI: R9311 | R9311 | AGIS | R9311C12g39029 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_12g0104600 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_12g0108800 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_12g0105800 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_12g0107800 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G1224007200.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G1237856800.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_031497 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G1233906800.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G1236051000.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG1227364400.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G1233017600.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G1231934800.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G1225785400.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G1222622200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G1218680400.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G1227639800.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G1235970000.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G1223659800.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG1234004400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G1219101800.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG1223993800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG1225139000.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG1232165400.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G1221304600.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G1223575800.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G1245397000.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG1231617000.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG1226982600.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG1221899600.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G1227578400.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG1229833800.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G1232230100.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G1231402000.01 | RBH | None | None | None |
