Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0068500 | OGI:11012880 | 49/50 | Minghui 63 | MH63RS3 | HZAU | Chr11:4129783-4132639 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | CTCACGAAAAAGCTCCCACAAAGCATCACCTGCAACCAGCCCCCGCTCATCTCCATCTTCCTCCTCCCTCCCTCTCTCCTGTGCTTCTTCTCTTCATCAACAAGAGAGCTTTCCCTCGATCTGTGTGTGTATATATATAGAGAGAGAGAGGGACTGATCTGGGTGTAGCGAGCTCGGTAGCCTAGCTAGCATGGGGAGGTCCCCATGCTGCGAGAAGGCGCACACGAACAAGGGAGCCTGGACGAAGGAGGAGGACCAGCGGCTCATCGCCTACATCAAGGCCAACGGCGAGGGATGCTGGAGGTCGCTCCCCAAGGCCGCAGGTATATACAACGTCGTACAAAATCATGCTACTCCGGCCATGGCGTGCATGGCGGCGGAGGTCGACGGTGACTGACTGAGTGTTACCTGTGTGTAGGGTTGCTGCGGTGCGGGAAAAGCTGCCGGCTGCGATGGATCAACTACCTGAGACCGGACCTCAAGCGAGGTAATTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCATGAGCTTCTAGGCAACAAGTAAGCCTCCATGCCGGCCATCCTGCAAAGAAGATAAATATTGTATTAGCTATATAAGAGATAGAATCATGATCCGATCATGACAACATGGCGATGGATGAATCGACAAGCATATTACTGATCACTGATCCATCGATGTGTGTATAATAACATATATCTATATGGTGTATATGCAGGTGGTCACTGATCGCCGGGAGGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTCGCCCGCGGCGTTGACCCGCAGACGCACCGCCCGCTCAATGCCGCCGCCGACCACCACCAGCAGCAGCAGCTCCAGGCGCCACGGCGGTTCGCCGCCGCGCCAGCCGGCCACCACCACCACCACCCTGACCATTTCGCCGTCCTCTCCAACTCGCCGGAGGCCTGCAGCCACAGCAGCGACGACGAGCCCAGCTCCGCCACGCCGCCGCCGCCGCCGCGTCACCTCGGCATCGACCTCAACCTTTCCATCAGCCTAGCTCCTTACCAGCCGCAGGATCAGACCAGCGAGCCGATGAAGCAGGAGGAGGACGACGAAGCGTCAGCGACGGCGAACGGCGCCGGCAATGCAGCGATGACGACGACGGCGACGACGGCGGCGGTGTGCCTGTGCTTGAACCGCCTCGGGCTCCACGGCGGCGAGGTGTGCAGCTGCGGACGCGGCGGCGCCCCCTCCATGCAGGCCAGCACACACATGTTTAGATTCATCACGCCGCTAGGAGGAAGCCACCACAACAGTAGTAGCACAACAATGACATAATTAATTAAGTTGAGGGAGGAGATATATATACTACTTAATTCGCAATTAAAACCCAGCCACACATGCTTAGCTCTTTGTAATATTCATCAGGAAATGTGATCTCTTTCTCTTTTTTTTTTTATTTCCCCTCATTTGCAGCCTCGGCCAGAGTGATCATCATGCTTCATCGATCATCATTCATCAGGGTGACATGGTTCATGAGTTAGTTTTAGTTGTTATTTCTTTCTTGTCTTCCTCTAGTTTCTTTTAACCCATATAGATAGTTTTTTTTAGGGCAAGACATGGGTTGTTGATGATCTACCATTAGATCTAAACATGCCCTTTTGGAGACCTCATAAGAATGCATCACTCAACACATAGCTTTCCAAACACTTTATTTCCCTCATGCATGCTAGTAGCCCTTTTGCAACTTGTTTTTATGTCTCCTTTTATATGGAGATGCTCTTGATTGGCCAAAGATGAGGGAGGTAAGGAGTGAGTGGTACATACTGATGAAAGTGAAGGAGGGTGCACGCTGTGGTTGTGGTGCTGCTGGTGGTTATGGGAAGTTAGGTTTCTTGATGAATGTTTGCAATCACATGAGCAGCCAGTGAGAAAAGGAGGCACAGTTTTTAAAGAAAAAAAATAAAGAAAAGGTTTGTCTTGTAGATAGAGAGGAGGGAGATCAGGGGGCCAGGGGGGAGAGAATGGAGAGCATGTGAGATGCTCTCTCTTTTTTGGGGGGGTTAGGTTGGTAGGTAGGTAGAAGGGATGGAAGAGGTGTTAATGAAGGGGATAAAGTGCCATCTAGGAGGGGGCATGGATTGAGGAGCTTTTGGTTAGTTAATGACTTAATAGTCGGAGCTTGGCTCGTGGTTTGTCCTTAGTCCTTGGGTGGATGCTGGTAACAGGTGGGGGTAATTAGTATTTTAATCATGGATCAGTGCTATAGTTAGCACTTAACTAAGCTAGCTTCAGGCTTTTCTGAAGAGGAGTGGGGGCCCAGGAAGGATGATCTTCAGAGTTAAGAGGATTAAGCACAAGCAGAATGTCAGTGGTCTCCCTCACTGATCACTCTAGTCTCATCCTACCTATGTATCTTCCATATTGCTAGATTTGAAGCTTGCATATTCCTCCATGGGCGCATAATTCCTTGAGCAACTTTTGTTTTAGCTATATTCAGGAGCAATCTGAAACTATACATGGGAGCATGCATACGTTTTAACCTAGAATATAACAAAGCCCAGTCCTTAATATTGTCCAACAGTCAGCTGTATAAACCAGAGGCAATAGCTAGGTAGGATGTGCTTTCTACACTTTGACAACAATCAGGTACCACAGCGAGAAGCTCAAAGTTGACAAAGATGGTCATGATATAGGGTGTGTTTAGTTTCTAAAAAAAATTGGAAGTTTGAAGAAAGTTGGAAGTTTACGTGTGTAGGAAAGTTTTTGATGTAAAATGATGTGATGGAAAGTTGAGAATAGAGGGAAACTAAACACGGCCATAGAAGAGAACTAGAAACCATTTC
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| CDS seq | MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKANGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHELLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLARGVDPQTHRPLNAAADHHQQQQLQAPRRFAAAPAGHHHHHPDHFAVLSNSPEACSHSSDDEPSSATPPPPPRHLGIDLNLSISLAPYQPQDQTSEPMKQEEDDEASATANGAGNAAMTTTATTAAVCLCLNRLGLHGGEVCSCGRGGAPSMQASTHMFRFITPLGGSHHNSSSTTMT |
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKANGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHELLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLARGVDPQTHRPLNAAADHHQQQQLQAPRRFAAAPAGHHHHHPDHFAVLSNSPEACSHSSDDEPSSATPPPPPRHLGIDLNLSISLAPYQPQDQTSEPMKQEEDDEASATANGAGNAAMTTTATTAAVCLCLNRLGLHGGEVCSCGRGGAPSMQASTHMFRFITPLGGSHHNSSSTTMT |
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| Function | Myb-related protein 308 [UniProtKB/Swiss-Prot:P81393] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0068500 | OsMH63_11T0068500-mRNA-1 | Chr11 | 4129783 | 4132639 | + | maker | ||
| CDS seq | ATGGGGAGGTCCCCATGCTGCGAGAAGGCGCACACGAACAAGGGAGCCTGGACGAAGGAGGAGGACCAGCGGCTCATCGCCTACATCAAGGCCAACGGCGAGGGATGCTGGAGGTCGCTCCCCAAGGCCGCAGGGTTGCTGCGGTGCGGGAAAAGCTGCCGGCTGCGATGGATCAACTACCTGAGACCGGACCTCAAGCGAGGTAATTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCATGAGCTTCTAGGCAACAAGTGGTCACTGATCGCCGGGAGGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTCGCCCGCGGCGTTGACCCGCAGACGCACCGCCCGCTCAATGCCGCCGCCGACCACCACCAGCAGCAGCAGCTCCAGGCGCCACGGCGGTTCGCCGCCGCGCCAGCCGGCCACCACCACCACCACCCTGACCATTTCGCCGTCCTCTCCAACTCGCCGGAGGCCTGCAGCCACAGCAGCGACGACGAGCCCAGCTCCGCCACGCCGCCGCCGCCGCCGCGTCACCTCGGCATCGACCTCAACCTTTCCATCAGCCTAGCTCCTTACCAGCCGCAGGATCAGACCAGCGAGCCGATGAAGCAGGAGGAGGACGACGAAGCGTCAGCGACGGCGAACGGCGCCGGCAATGCAGCGATGACGACGACGGCGACGACGGCGGCGGTGTGCCTGTGCTTGAACCGCCTCGGGCTCCACGGCGGCGAGGTGTGCAGCTGCGGACGCGGCGGCGCCCCCTCCATGCAGGCCAGCACACACATGTTTAGATTCATCACGCCGCTAGGAGGAAGCCACCACAACAGTAGTAGCACAACAATGACATAA
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKANGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHELLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLARGVDPQTHRPLNAAADHHQQQQLQAPRRFAAAPAGHHHHHPDHFAVLSNSPEACSHSSDDEPSSATPPPPPRHLGIDLNLSISLAPYQPQDQTSEPMKQEEDDEASATANGAGNAAMTTTATTAAVCLCLNRLGLHGGEVCSCGRGGAPSMQASTHMFRFITPLGGSHHNSSSTTMT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.629367 | 1.08538 | 2.534217 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0180900 | RBH | 1.443663 | 1.916514 | 4.574543 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g03440 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0180900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0005370 | RBH | 0.0 | 4.119169 | 7.058246 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0005340 | RBH | 0.105813 | 0.0 | 2.119029 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0005380 | RBH | 0.0 | 9.308150 | 8.674186 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0005230 | RBH | 0.059478 | 0.250218 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0005150 | RBH | 0.0 | 0.0 | 5.267134 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0064100 | RBH | 0.1795055 | 0.4616885 | 0.4507485 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0005230 | RBH | 0.080497 | 0.802662 | 1.679427 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0068200 | RBH | 7.8636415 | 0.8953855 | 7.3138085 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0005190 | RBH | 0.206597 | 0.195011 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0005250 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0005280 | RBH | 0.0 | 5.884669 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0005260 | RBH | 0.146748 | 0.0 | 1.456709 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0005250 | RBH | 0.000000 | 3.864149 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G005310 | RBH | 0.0 | 2.787216 | 4.809916 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0005200 | RBH | 0.747245 | 0.000000 | 9.739234 |
| Os XI: R9311 | R9311 | AGIS | R9311C11g35953 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_11g0058100 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_11g0058200 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_11g0058600 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_11g0057000 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G1120722300.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G1180002165.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_028263 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G1180201546.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G1132759300.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG1180002026.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G1129141100.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G1128832300.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G1121791100.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G1180002203.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G1180003071.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G1180002682.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G1180002311.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G1180002937.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG1130028300.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G1118232500.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG1180003136.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG1121405700.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG1128722100.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G1119358600.01 | SBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G1122076100.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G1180201797.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG1180002345.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG1180002663.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG1118904900.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G1180002612.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG1180002336.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G1180002313.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G1127446700.01 | RBH | None | None | None |
