Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_09G0356100 | OGI:09062230 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr09:23025482-23026854 | ||||||||
| Gene Symbol | OsMYB108,OsMYB31,OsDLN231,MYB31,MYB108,R2R3-MYB,DLN231 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | AGTATAGTAACAAGTCACCATAATTAAGATCTGGTTCATGGCCCCAGCCTTGAAAGCATCCATCCACTCCACATACTGGATGAGGCACTGGATCTAACTGAGCTATAGTAGCTAAGTTACAGTGAAGTGACTAATTAAGTACTTACTTAGCATCAAGTATTATTTGTCATGATTAGTCAATATATGGTAATTACAACAGAGACAAAATGGAGCAGCAAGAGCAGCAGAGGAGATGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTTTTCACCTAGAAGAAAAGCTAACCAATATCCAAGTGACAAAACGAAAGAAGAAACTACAGAGAAGGAGGTGCTCATTTCATTTCCAAGCTTCTGAAGTCGAGCATGGCTGTCCTGAGTCCCAGGAAGCTGCTGCACTTGCAGTCTGTGCTCTTGGGGAGCCCCAGGCTGCAGCTGAAGCAGACGCCGGTCTCCCTCTTCACCGGCTTCATCATCATGGGCTCTTCTTGGGAAGGGAGGCTGATGCAGAGGTCCAGATTGAGGTCAGGGCACTTGAGTGGCTTCCCATGGCCCCAATCGGCGGCTGCCTGCTGCTCCTGTGCCACTGTCACCGCCTTCGGCTGATGAGGATGGTCCTCTCGCCGGAACACGGCGGCCTTGTCGTCCCTCGCCGCCGCCGCGGCCGCCTCGAATGATATGGTGATGTTGGACGCGCTGTCGTTGATCGGCCGGTGTGTCACCGGGTCGATGCCACGGCTCAGCAGCTTCCTCCTGATGTGCGTGTTCCAGTAGTTCTTGATCTCGTTGTCCGTTCTTCCTGGCAACCTCCCGGCTATCAGAGACCATCTGCATCAAACAGGAGTAGCAACAACAACAACAACAAACAACCGTTTTAGCAATCAGAACAGTATCAAACACGAGCTCTTTATATATAAAAACTGAAACTGATACAACTCATATTCATGCATGCAAATCCTAGTATCATTGAGATGAACACACGTACTTGTTGCCTAAAAGGCTGTGAAGCTTGATGATCAGCTCATCCTCCTCCTCGGTGAAGTTGCCGCGCTTGAGGTCAGGCCGGAGGTAGTTGATCCACCGGAGGCGGCAGCTCTTGCCACAGCGGAGGAGGCCGGCGGCCTTGGGCAGCGATCGCCAGCAACCTTCGCCGTGCGCCTTGATGTAGGCAATGAGCCGGTCATCTTCCTCCTTGGTCCATGCTCCCTTGTTGGTGTGTGCCTTCTCGCAGCACGGTGACCTCCCCATGAAGACGATGAAGCTTTCTTGATTCTTTCCTTTCTTCTGCTGCCTCGGTGGGTTGTTTCAGTGGAAGTTGTTGCTGCTGCTGCTGCTGCTGTTGCTGGGCAGCAAATGG
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| CDS seq | ATGGGGAGGTCACCGTGCTGCGAGAAGGCACACACCAACAAGGGAGCATGGACCAAGGAGGAAGATGACCGGCTCATTGCCTACATCAAGGCGCACGGCGAAGGTTGCTGGCGATCGCTGCCCAAGGCCGCCGGCCTCCTCCGCTGTGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTCCGGCCTGACCTCAAGCGCGGCAACTTCACCGAGGAGGAGGATGAGCTGATCATCAAGCTTCACAGCCTTTTAGGCAACAAATGGTCTCTGATAGCCGGGAGGTTGCCAGGAAGAACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAGGAGGAAGCTGCTGAGCCGTGGCATCGACCCGGTGACACACCGGCCGATCAACGACAGCGCGTCCAACATCACCATATCATTCGAGGCGGCCGCGGCGGCGGCGAGGGACGACAAGGCCGCCGTGTTCCGGCGAGAGGACCATCCTCATCAGCCGAAGGCGGTGACAGTGGCACAGGAGCAGCAGGCAGCCGCCGATTGGGGCCATGGGAAGCCACTCAAGTGCCCTGACCTCAATCTGGACCTCTGCATCAGCCTCCCTTCCCAAGAAGAGCCCATGATGATGAAGCCGGTGAAGAGGGAGACCGGCGTCTGCTTCAGCTGCAGCCTGGGGCTCCCCAAGAGCACAGACTGCAAGTGCAGCAGCTTCCTGGGACTCAGGACAGCCATGCTCGACTTCAGAAGCTTGGAAATGAAATGA
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDDRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPVTHRPINDSASNITISFEAAAAAARDDKAAVFRREDHPHQPKAVTVAQEQQAAADWGHGKPLKCPDLNLDLCISLPSQEEPMMMKPVKRETGVCFSCSLGLPKSTDCKCSSFLGLRTAMLDFRSLEMK |
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| Function | Myb-related protein Hv1 [UniProtKB/Swiss-Prot:P20026] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_09G0356100 | OsMH63_09T0356100-mRNA-1 | Chr09 | 23025482 | 23026854 | - | maker | ||
| CDS seq | ATGGGGAGGTCACCGTGCTGCGAGAAGGCACACACCAACAAGGGAGCATGGACCAAGGAGGAAGATGACCGGCTCATTGCCTACATCAAGGCGCACGGCGAAGGTTGCTGGCGATCGCTGCCCAAGGCCGCCGGCCTCCTCCGCTGTGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTCCGGCCTGACCTCAAGCGCGGCAACTTCACCGAGGAGGAGGATGAGCTGATCATCAAGCTTCACAGCCTTTTAGGCAACAAATGGTCTCTGATAGCCGGGAGGTTGCCAGGAAGAACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAGGAGGAAGCTGCTGAGCCGTGGCATCGACCCGGTGACACACCGGCCGATCAACGACAGCGCGTCCAACATCACCATATCATTCGAGGCGGCCGCGGCGGCGGCGAGGGACGACAAGGCCGCCGTGTTCCGGCGAGAGGACCATCCTCATCAGCCGAAGGCGGTGACAGTGGCACAGGAGCAGCAGGCAGCCGCCGATTGGGGCCATGGGAAGCCACTCAAGTGCCCTGACCTCAATCTGGACCTCTGCATCAGCCTCCCTTCCCAAGAAGAGCCCATGATGATGAAGCCGGTGAAGAGGGAGACCGGCGTCTGCTTCAGCTGCAGCCTGGGGCTCCCCAAGAGCACAGACTGCAAGTGCAGCAGCTTCCTGGGACTCAGGACAGCCATGCTCGACTTCAGAAGCTTGGAAATGAAATGA
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDDRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPVTHRPINDSASNITISFEAAAAAARDDKAAVFRREDHPHQPKAVTVAQEQQAAADWGHGKPLKCPDLNLDLCISLPSQEEPMMMKPVKRETGVCFSCSLGLPKSTDCKCSSFLGLRTAMLDFRSLEMK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 22.1156645 | 44.354776 | 3.764043 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0538400 | RBH | 0.0 | 0.0 | 2.573155 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g36730 | RBH | 0.0 | 0.0 | 0.580203 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0538400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0017970 | RBH | 0.521195 | 28.785158 | 4.038730 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0018060 | RBH | 0.0 | 5.446156 | 1.125629 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0018280 | RBH | 2.181170 | 32.609127 | 4.982000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0018030 | RBH | 0.0 | 0.761781 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0018210 | RBH | 0.772807 | 2.887200 | 12.710344 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0437700 | RBH | 6.139104 | 57.3905715 | 2.6770865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0018020 | RBH | 0.259100 | 2.460436 | 0.840155 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0344100 | RBH | 36.2627155 | 29.5809985 | 14.6095995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0018090 | RBH | 0.0 | 0.143768 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0017840 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0017860 | RBH | 0.0 | 12.221916 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0017840 | RBH | 0.802919 | 0.0 | 0.740542 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0017970 | RBH | 0.238287 | 8.858744 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G018350 | RBH | 0.000000 | 3.938218 | 4.536396 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0018220 | RBH | 0.425087 | 66.126923 | 3.933454 |
| Os XI: R9311 | R9311 | AGIS | R9311C09g32690 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_09g0226500 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_09g0225900 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_09g0213500 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_09g0228300 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0917451800.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0931581000.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_035060 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0928455600.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0930178200.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0921857800.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0926023200.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0926213400.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0919803800.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0918017200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0915362000.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0922028800.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0930277800.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0920391600.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0926651400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0917339800.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0917439200.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0918376600.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0925559800.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0917875600.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0919994200.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0938773200.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0925890400.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0921314800.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0916273600.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0921827800.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0923888200.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0925545800.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0924056800.01 | RBH | None | None | None |
