Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_09G0265300 | OGI:09046960 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr09:17401617-17408684 | ||||||||
| Gene Symbol | OsARID,ARID5 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
||||||||||
| DNA seq | AGAATGAAATAAGGTTCAATTTATCAGTTAGTGTCAACAACAACAAAAAAAGCCTGAGTGCAAATTAAGCACAATCCTTGTGTCAGGAGAAACAGGAGGAGATACAACCAAAACATATATCAACAGGCTCTTAACTTAATTTGACCAGCTACCGTAGTAGCTTAGCTGTGTTGTCAGTTGTTACATTCTATATAAAACTTAAGCTTCCTACGCTGAACCAAATTAATAGGGTAATACAGATCACAACACTACACACCTTCCTCTCTCTATCAGCAGCCTGCCTATTCTCTACTCTACTGGGCTCTTCTCCCCGAAACACAGGGCAAAAAAGAAGAAAGGAAAACTAAACATTTCGTGATACAGACACTGTATTCGCAAAGCCATTAGCTACCTTTTGGGGAGGAGGTTTCTTCTTATAGTTTGCTAGACTACAGTGAGGGCAGATGTATTCCAGCCCATCTGTCTTTGCATAATCCTGTAAAGAAGGTGACTCATATAAGATCAAGCTATGACCAATAGAAAAGGACTGAACTAAAAGTTTTTTTTTCTAACCTTGAAAGTGCCTAGGCCTTGTCGTCTGTCACAACCAAAATGTGCCCATTCACCACACAAACCACAGTTCACCCAATCTCCAGGAGCGCTACTGGAATTACACAGGAGATGGTGTTAGATTCGATTATGACAAACCATAATCGCAAATTGGGGAACCAAAGGAGGCATAGAAAGGGATGTCCTCAAACCTGTGGCAAAGCAAACAGCATTCCCCGTCTACATCATCATGAGCTAGCTCATATTCCAGTAAATATGTTTCGTAATGTCTTTTCAGTGTGTTTCCAACACCCTAAACATTTTAGGACAAATGTGTACAGTTAACATTTAACATTTCACTTAACAGAATTTGTTGAAGGTAGTAGCAGAGATAAATAAGGTGGCACTTTATGATGAATTTACATCAAAATGAACTACTACTCCGTATATATATTTCAACATAGATGAAAGACAATGATGCTGAAGCTGAGTGGTCCATCAATTAGTTAGTAGCTTTTACCAGACTCACCAACAAAGGAAATGATAAATTTAATACGTGAAAGTAGTGTGAACAAAATGGCATAAAGACATATGTTAGTGGCACTAAGATAACAGCAAAACTATAGCATGCTAAAAGTGGCACAGGTTAAGATCCAATAAGAAAATGCCTTCAAGGTTACGCATTCTATTTGTCACAGTAGTAAATAGTGGATACATACGGTCATTCTATTTGTCACAGTATGGTTACGCATCTTCGAGAAGACTTGACCCTTCCAGTTTATACCATTGCCTACATAAAAGCCACCCCTAGACACCACCTGAAAAAACAAACACTTCGTCAGGAAACGAGCCAAAGAAAATGTCTTCTTCTGGTCACCTTGCTATGCATAAACCAGAATGTGCTAATTTTAGCATTACCTCTTTGTACAAGTTATATAGGTCAAGGCGCTTCGCATTAAGGACGGCCTCAGGAAATTCAGCTAGTCCTCCATGAGGTACGAGTCGATTATGACCCCTCTGAATTAAAAACTGCATGACATCCTTCAAGAAGTCCTCCTAGAAAAAGGTTAAACACATTATTTTAGCACGATAATGTACTTGTATAGAAGCACTTCATCCTCATGTAAGACCCAAGAAGCATACCTCAGAGCATATCTGAATAGGCAACCGATCACATCCATGTTTTTTCAGAGGCAGTGGGTTCAGTTGAATGATTGACTGAGCATGAGATGGCCCTGAAGTTGATTTTCTATGTGTTGCTGGAGCAGCAGGTACCGAATTATGCTTCACTGGGGGAGCAGCTGGCAAGTTTGGCTTAACCTGACTAGTTTCATGAACAGTAGCTTCCAGGAAACCCATAAAAGGATGCATTTGTTGCTTTCTAGAGTGAGGAATGGGCCTCATAGTTGCAGGCTTCAATTTTGCCTTGGAAGATGAGGAAGGCCCTTCGATCAGACGTTTCTTGTCCTCAGGAATTCCATTCGCACCTAACAAATTTGGTTTCGATTCCAGACCCACCTTCACTCTTTCCTTGGTAAGAGATGCTGACCATCTTGGCAGATGAAAGTATGGGCCATTTTCAATAGCCAAATGTTTGTGTTGATTTGTACAAAAGAAAAGAAGGCGGTCTGCATCTCGCCTATCAAATGAAGCAACAGGCGTGCCATTTATACAACCAATTCCAAGTGCCACTAAGCTCCTGTATGAGATGTCTGGCGCTAAATGCTTCAGAACCTAATTATTCAGATAAAAATATTGATGGTCAGTCAAAGATTAACAAATAATGTTTTACATGTGAGGATTAGATAATGAGATTGAAGACTTTTGTTGCTTTCATAACTAATCACTGTTCTTGGAGATCAAAAGCAAAAGCATGAGAAGAGCCTTTTACAATAGAATTACACAACATTATGAACTTTCAGTCGGTGCATCGGAAAAAAAAAAGATAAAGAGAAGCCAAGTAATGAATAAAAATATGAGCAAATAAGCACACCCTGCACTTCTAATCACAGCATATCTTGTGTGTTCAATACAGTTATCCAACCTGTGCTGCCCACTTAGGAAGGGTCATCCAAACTTCAAAGGTAGAAGCCCCACAAGCTGTGGACATTGAAGTGAAAGGCACACTTGATGATAACTTATCATCATTATTTGGCAGAGCATGGACTAGTTGGCTCTTCTCAATGATCTCATCCTTGATGTGGCTTTCCAAAAGCTGAAGAAAGGTAGATGCCATATAATTTTGTACATGTAAGATCAGGAATTATATATCCAGGTTCGCAGAAATTCATACCTGGTCATCAAAACAAGTTTGTGCGCTACCAGAAACAAGAAGTGACACATGAGAAGAACTGCATGTAGTGATGTCGCAACGCATTGTAACCATTCCACGTGGTAAGGATGCAGCATGAAGTGGTGGTGGAGAAGCACTGCCACATATGAAAGAAGTCTTATCAACTATACTCAGCAGCAGAAGAGAAAACAATTTGTTAAGTGGTATTTTAAGTATGATGGAAAATCAATATTGGGACAACTCCAACATGCATAAGGCAAATTGTATACAGTATAAGCTACAGTTTATTAGTAGCTCTAACATAAAGGAAAAAAGGATCACTAGTACACATTTTCTGAAACAGTTTGTCCACCCCTAAAAGAAACTTGACAGCATTATGCATGACAATCAAACTTGACAGATGGCACAAAACTAAAGGAGTCATGGACATGGTAGTATGCTACAGAAAGGTACGGGTATGTAAACAGCTAGAACAGACAACAATTCAACGTACCTGATTCGATTCTGAAGTTTGCACCCCCGAATCTGCCAAAAACAAGATCAACCGTTAGATAGAGCAATAAGTTGCAAAAACAACACACAAACAGAAGAAAGAACTTGCATAAAAGCTTGGTGGATAATAACTAAAGAAATCCTGATGCATCAAATATCACTATGCTAGTCTATGTGTTTGCATCCTTCGACCAAGAAATAATACAAGAAAAGGATGGACTGCTAACTTCAGATTTTCAGAACCAGCATGTGTACAACGTAGTCTGAGATTTGGTGGTGCCAAGTAAAAAATTGAACCACCATTTTATTGCTAGCATCTTGTAGACTGAAACTAAGATGTCTATCTAGATTTTATTTGTGTGGTGTTATTTAGGGTGGTTTCATGCATAGTGCTGTTGTGAGCCACATCAGTACATCAAAACATTTCCGCTCCCTCCCTCTCTTTCCTTAATCAGAACAATTAACACGCAAAATACATCCCTTTTCTAAATATTGAACAAGAAAACAAAATGTTGTAATGTTAAGAAAACAGAACAGTTTCAATAGTATCTAACATACTGAGATCCTAGTTTCTTCAAACTTGAGTTAAGGTATCTAAAACAAAGGTTGCTCATAGAATCATTATACTCCATCTTTTCTTCAGGAAATAGTGTAAAATTTACTCCATGGTCCATAAAAAATAATCAATGTACAGTAGAGCTGCAATGCTTTATTCCATACTTCAATATTCAGAAGTGCATTCAGGCCATCTTCTAATGAACCTAACAAACAAGGATCCTGCAGAAGAGAAGAGGTTAACAACACCATTAAACCAATTCGTACAATAGAGGAAATAAGATGTAAGGAAATTTGGATATAAAATACCAAAGCTTACCGGTGTGCTAGGAACTCCACAAAGAAGAAATTTCATGTTGATGTCATCATCATAAATTTTTATAGCTGGAAACACATCTGAAGAACCTTCCTCCTCAACCATCTCATTCTCAGGAGGGGTTATATTTATCTTTGGAGCATCCCCTAGTAGACGAGGCCCAAGCTTAACACTTTGTACATGGTTGTTTCTTACACAGTATAATCGAAAGGATGCATGAGCAAGCTGAAAAGCATCCCAAGTATGGCTCACCGAACTACATATACAAGAAAATTATTAGTTGTTATTGCCGTATGATGATGATGGTAGAGAGGGAAAAGGATGCTGGTACCTTTGAACCACTGACATTAATGCATGGCGAAAATGGGATGCTGCATATGATGAAAATGAATTTCTCCAGTATATTACGTATGGAATCCCCTGAAATGAAACATCACCACTGCTAAATTCCAAATAGTGTCATGTGTAAAATAGTACTGCATACTTGGTTGTTCAACATTTCAGTGCTTGTTTATAGATAAAAGAATCTATAGAGCAAAAATTTCGTCCTACAGAGTCTAGACATTTGTTGAAAAACTACTAGCACTGTACTACTACTATGTCGTAGGGTTAAGATATGATCTAAATGAGACAGACTAAAAAAGGAAAACGTTTGGTACTTCTGAACGAACTACAGTCTCAAAACGATGTTATAAGGTTTGGTTGATTAACAAGATGGAATATTGAAAAAGGAAAATGGAAGACTTCTACCTTTGAATGAACTGCTTGAGCAAGTTTTTCACCAATTGGAACCTCCAGATAAACCTGTATTGACAACCGTTAAGCAGGGTTAGCACCACCCGGACAGAGGAAGTTTTCAAATTCTCACATACCATGGTATGGCACTACAATGTGGTGCCCAGAACATATCAGAGACCATCATGTAACTAGGAAATGATGCAGTTGTGAGGCCTTCTTTTTTGGTTTTCCATTAACAGCTAATAGTAGACAAAGGAAAGGTTGCTCTACTGCTCTTTCAACTAAAGAGTACAAATATTGCATACGCTCGACAAAAGGTTTGTGCTTACTATGGTCGGAAATGGCGGGCTGATGAGACAACTAAACGCCTGCGGATCAGATACGTCATTGTCCCCCCAGACGAGCGAGCCAATCTCCTTCTCATCCTCAAGCTGTTGCCCCTGGATGTACAAGAAGTTGGGCTGAACCACGCGCTGCGCCTCGAGGAACTGCTCTGGTGTCGGGTTGAACAGCGTGTGCACCTGCACTCGAAAATCTCCCTCGTTTTCAGCTCGCACAACAAAACAAATCACCACCCCCCACAACACCAACCGAGAATGCTAGCTCACCTCCAATCTCCCCGACGAGCTGAGCTCTGGGAACGGGTACGACGGCCTCAGCCACTTCGCCTCCGGCCCCGACCTCGCCTGGGCACGCTTCTCAGCGTGCTTCCCACACAGCACCGCGAGGAGCACGCAGTTCTGCCGCGAGAAGCTCTGGATTTGCGACATGGCCGCCGCAGCAACCCTACCCCCCTCTCTCTCTCTCTCTCTCTTCCCCAACTTCACCTCACGCCCTCATGGAACCCTACAACAACAGCAAGAACAAATCACACAAAATTAAATAAATCCAACCAAATCCGCGGCAAGAACCCACGAATCGACGCGGGGCAAACATACCAGGGCGCAATTCAGAGGCCGAATCGGAGCCCCCGCGACACAGAATCGAGTCAATCGACGGCTTCCCCCTCCCCAGATCGCTCCCTCCCCGCGGCGCCGCAGGAGGGGAGAGAGGATTCGATTTGGAGGGCAAAGGGGAATAATGATATAGAAAAAAAAAAGAGTAAAGTGGGCGAGAGAGAACACACACGGAGCCCTAGCGATTGCCGAAATAGCTCTCTACAATCCCCACTACGGAAACAATAAAAAAGAAGCGTACTTGTGGTGGTGGAGGCGAATTGGACGCGAGCCCAACCCACCCCGCATCCATCCCGATCGAGCCAAGACCAACCAAAGGAAAAAAAAAACCAAAAGCTTTGGCTCCGCGACGAGATGACGAAATGAATCCAAGAAAAACCTCCACAAATCCTGACCAAGAAATTGAACGCCTCTCCTTGGGAGGAAAAGACTCGATTATTAGCAGCAGCAAACCAACCACCAGCCTGACAATTATTACCAGAGAGGGGGGGCGAGAACAGTAGGCGGCCGGGGATGCGCCAAGATTGGATTTTGACGGCTGCGAGAGAGAGATTTGTGAGAGATTTTTATTTTATTTTCTTTCTCTCTTTCTTTCTCTCGAGCAAGCAAAGCTGCAGCAGTGGAGATGGGGGGGGGGGGGCTCGAGACTTTTCCTCGGATTTTTTTCCTTCCTCTCACATCTAACCTATTCTCCTGATGAAGCCTGAGCCGATGATGCTTGCTGCTGCTGCTGCTGCTGTGGATGTGTTGGTGCGTTGTTTTCTTGGCGCTTTTCGTTTTCTTTTCCTCATTACTTCTACTACTACTACTGCTCTGGCTCGGACGGAAGGGAAGGGAAGGGAATTTTTAGATGATTAGATTAGATTTCGCTGGAAATGGGGATTGGGGGGATTTCTTTTCTTTCTTTTGAGTATGTGGTGTGGTGCAGCGTATATTGATCGATTGGGGGATTTTTAATTTATTTGGACACGTTCGCTGCATCGGCAGGGTGTGTGCAGTTGTATGTTGTTTTTGTTTGTGTGTTTTTCTCTGGGATTTTGGGTTGGGTGCTTGACCTGCTGCTGCGCTGCTGCTTGTCTAGTTCGTGGGGGCAGGCGCCCGTTTGATCCGTCTCGCCGTGTTGCAAATCGCAGCGATGGAGCGAGCTGTGGACTGGACTTCTCACGTGTGATGGGGTCGCTGCCTGGTGG
More
|
||||||||||
| CDS seq | ATGTCGCAAATCCAGAGCTTCTCGCGGCAGAACTGCGTGCTCCTCGCGGTGCTGTGTGGGAAGCACGCTGAGAAGCGTGCCCAGGCGAGGTCGGGGCCGGAGGCGAAGTGGCTGAGGCCGTCGTACCCGTTCCCAGAGCTCAGCTCGTCGGGGAGATTGGAGGTGCACACGCTGTTCAACCCGACACCAGAGCAGTTCCTCGAGGCGCAGCGCGTGGTTCAGCCCAACTTCTTGTACATCCAGGGGCAACAGCTTGAGGATGAGAAGGAGATTGGCTCGCTCGTCTGGGGGGACAATGACGTATCTGATCCGCAGGCGTTTAGTTGTCTCATCAGCCCGCCATTTCCGACCATAGTTTATCTGGAGGTTCCAATTGGTGAAAAACTTGCTCAAGCAGTTCATTCAAAGGGGATTCCATACGTAATATACTGGAGAAATTCATTTTCATCATATGCAGCATCCCATTTTCGCCATGCATTAATGTCAGTGGTTCAAAGTTCGGTGAGCCATACTTGGGATGCTTTTCAGCTTGCTCATGCATCCTTTCGATTATACTGTGTAAGAAACAACCATGTACAAAGTGTTAAGCTTGGGCCTCGTCTACTAGGGGATGCTCCAAAGATAAATATAACCCCTCCTGAGAATGAGATGGTTGAGGAGGAAGGTTCTTCAGATGTGTTTCCAGCTATAAAAATTTATGATGATGACATCAACATGAAATTTCTTCTTTGTGGAGTTCCTAGCACACCGGATCCTTGTTTGTTAGGTTCATTAGAAGATGGCCTGAATGCACTTCTGAATATTGAAGTATGGAATAAAGCATTGCAGCTCTACTATTCGGGGGTGCAAACTTCAGAATCGAATCAGTTTCTTTTAGGGGTGGACAAACTGTTTCAGAAAATTGCTTCTCCACCACCACTTCATGCTGCATCCTTACCACGTGGAATGGTTACAATGCGTTGCGACATCACTACATGCAGTTCTTCTCATGTGTCACTTCTTGTTTCTGGTAGCGCACAAACTTGTTTTGATGACCAGCTTTTGGAAAGCCACATCAAGGATGAGATCATTGAGAAGAGCCAACTAGTCCATGCTCTGCCAAATAATGATGATAAGTTATCATCAAGTGTGCCTTTCACTTCAATGTCCACAGCTTGTGGGGCTTCTACCTTTGAAGTTTGGATGACCCTTCCTAAGTGGGCAGCACAGGTTCTGAAGCATTTAGCGCCAGACATCTCATACAGGAGCTTAGTGGCACTTGGAATTGGTTGTATAAATGGCACGCCTGTTGCTTCATTTGATAGGCGAGATGCAGACCGCCTTCTTTTCTTTTGTACAAATCAACACAAACATTTGGCTATTGAAAATGGCCCATACTTTCATCTGCCAAGATGGTCAGCATCTCTTACCAAGGAAAGAGTGAAGGTGGGTCTGGAATCGAAACCAAATTTGTTAGGTGCGAATGGAATTCCTGAGGACAAGAAACGTCTGATCGAAGGGCCTTCCTCATCTTCCAAGGCAAAATTGAAGCCTGCAACTATGAGGCCCATTCCTCACTCTAGAAAGCAACAAATGCATCCTTTTATGGGTTTCCTGGAAGCTACTGTTCATGAAACTAGTCAGGTTAAGCCAAACTTGCCAGCTGCTCCCCCAGTGAAGCATAATTCGGTACCTGCTGCTCCAGCAACACATAGAAAATCAACTTCAGGGCCATCTCATGCTCAGTCAATCATTCAACTGAACCCACTGCCTCTGAAAAAACATGGATGTGATCGGTTGCCTATTCAGATATGCTCTGAGGAGGACTTCTTGAAGGATGTCATGCAGTTTTTAATTCAGAGGGGTCATAATCGACTCGTACCTCATGGAGGACTAGCTGAATTTCCTGAGGCCGTCCTTAATGCGAAGCGCCTTGACCTATATAACTTGTACAAAGAGGTGGTGTCTAGGGGTGGCTTTTATGTAGGCAATGGTATAAACTGGAAGGGTCAAGTCTTCTCGAAGATGCGTAACCATACTGTGACAAATAGAATGACCGGTGTTGGAAACACACTGAAAAGACATTACGAAACATATTTACTGGAATATGAGCTAGCTCATGATGATGTAGACGGGGAATGCTGTTTGCTTTGCCACAGTAGCGCTCCTGGAGATTGGGTGAACTGTGGTTTGTGTGGTGAATGGGCACATTTTGGTTGTGACAGACGACAAGGCCTAGGCACTTTCAAGGATTATGCAAAGACAGATGGGCTGGAATACATCTGCCCTCACTGTAGTCTAGCAAACTATAAGAAGAAACCTCCTCCCCAAAAGGTAGCTAATGGCTTTGCGAATACAGTGTCTGTATCACGAAATGTTTAG
More
|
||||||||||
| Protein seq | MSQIQSFSRQNCVLLAVLCGKHAEKRAQARSGPEAKWLRPSYPFPELSSSGRLEVHTLFNPTPEQFLEAQRVVQPNFLYIQGQQLEDEKEIGSLVWGDNDVSDPQAFSCLISPPFPTIVYLEVPIGEKLAQAVHSKGIPYVIYWRNSFSSYAASHFRHALMSVVQSSVSHTWDAFQLAHASFRLYCVRNNHVQSVKLGPRLLGDAPKINITPPENEMVEEEGSSDVFPAIKIYDDDINMKFLLCGVPSTPDPCLLGSLEDGLNALLNIEVWNKALQLYYSGVQTSESNQFLLGVDKLFQKIASPPPLHAASLPRGMVTMRCDITTCSSSHVSLLVSGSAQTCFDDQLLESHIKDEIIEKSQLVHALPNNDDKLSSSVPFTSMSTACGASTFEVWMTLPKWAAQVLKHLAPDISYRSLVALGIGCINGTPVASFDRRDADRLLFFCTNQHKHLAIENGPYFHLPRWSASLTKERVKVGLESKPNLLGANGIPEDKKRLIEGPSSSSKAKLKPATMRPIPHSRKQQMHPFMGFLEATVHETSQVKPNLPAAPPVKHNSVPAAPATHRKSTSGPSHAQSIIQLNPLPLKKHGCDRLPIQICSEEDFLKDVMQFLIQRGHNRLVPHGGLAEFPEAVLNAKRLDLYNLYKEVVSRGGFYVGNGINWKGQVFSKMRNHTVTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAPGDWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGLEYICPHCSLANYKKKPPPQKVANGFANTVSVSRNV |
||||||||||
| Function | AT-rich interactive domain-containing protein 4 [UniProtKB/Swiss-Prot:Q6NQ79] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_09G0265300 | OsMH63_09T0265300-mRNA-1 | Chr09 | 17401617 | 17408684 | - | maker | ||
| CDS seq | ATGTCGCAAATCCAGAGCTTCTCGCGGCAGAACTGCGTGCTCCTCGCGGTGCTGTGTGGGAAGCACGCTGAGAAGCGTGCCCAGGCGAGGTCGGGGCCGGAGGCGAAGTGGCTGAGGCCGTCGTACCCGTTCCCAGAGCTCAGCTCGTCGGGGAGATTGGAGGTGCACACGCTGTTCAACCCGACACCAGAGCAGTTCCTCGAGGCGCAGCGCGTGGTTCAGCCCAACTTCTTGTACATCCAGGGGCAACAGCTTGAGGATGAGAAGGAGATTGGCTCGCTCGTCTGGGGGGACAATGACGTATCTGATCCGCAGGCGTTTAGTTGTCTCATCAGCCCGCCATTTCCGACCATAGTTTATCTGGAGGTTCCAATTGGTGAAAAACTTGCTCAAGCAGTTCATTCAAAGGGGATTCCATACGTAATATACTGGAGAAATTCATTTTCATCATATGCAGCATCCCATTTTCGCCATGCATTAATGTCAGTGGTTCAAAGTTCGGTGAGCCATACTTGGGATGCTTTTCAGCTTGCTCATGCATCCTTTCGATTATACTGTGTAAGAAACAACCATGTACAAAGTGTTAAGCTTGGGCCTCGTCTACTAGGGGATGCTCCAAAGATAAATATAACCCCTCCTGAGAATGAGATGGTTGAGGAGGAAGGTTCTTCAGATGTGTTTCCAGCTATAAAAATTTATGATGATGACATCAACATGAAATTTCTTCTTTGTGGAGTTCCTAGCACACCGGATCCTTGTTTGTTAGGTTCATTAGAAGATGGCCTGAATGCACTTCTGAATATTGAAGTATGGAATAAAGCATTGCAGCTCTACTATTCGGGGGTGCAAACTTCAGAATCGAATCAGTTTCTTTTAGGGGTGGACAAACTGTTTCAGAAAATTGCTTCTCCACCACCACTTCATGCTGCATCCTTACCACGTGGAATGGTTACAATGCGTTGCGACATCACTACATGCAGTTCTTCTCATGTGTCACTTCTTGTTTCTGGTAGCGCACAAACTTGTTTTGATGACCAGCTTTTGGAAAGCCACATCAAGGATGAGATCATTGAGAAGAGCCAACTAGTCCATGCTCTGCCAAATAATGATGATAAGTTATCATCAAGTGTGCCTTTCACTTCAATGTCCACAGCTTGTGGGGCTTCTACCTTTGAAGTTTGGATGACCCTTCCTAAGTGGGCAGCACAGGTTCTGAAGCATTTAGCGCCAGACATCTCATACAGGAGCTTAGTGGCACTTGGAATTGGTTGTATAAATGGCACGCCTGTTGCTTCATTTGATAGGCGAGATGCAGACCGCCTTCTTTTCTTTTGTACAAATCAACACAAACATTTGGCTATTGAAAATGGCCCATACTTTCATCTGCCAAGATGGTCAGCATCTCTTACCAAGGAAAGAGTGAAGGTGGGTCTGGAATCGAAACCAAATTTGTTAGGTGCGAATGGAATTCCTGAGGACAAGAAACGTCTGATCGAAGGGCCTTCCTCATCTTCCAAGGCAAAATTGAAGCCTGCAACTATGAGGCCCATTCCTCACTCTAGAAAGCAACAAATGCATCCTTTTATGGGTTTCCTGGAAGCTACTGTTCATGAAACTAGTCAGGTTAAGCCAAACTTGCCAGCTGCTCCCCCAGTGAAGCATAATTCGGTACCTGCTGCTCCAGCAACACATAGAAAATCAACTTCAGGGCCATCTCATGCTCAGTCAATCATTCAACTGAACCCACTGCCTCTGAAAAAACATGGATGTGATCGGTTGCCTATTCAGATATGCTCTGAGGAGGACTTCTTGAAGGATGTCATGCAGTTTTTAATTCAGAGGGGTCATAATCGACTCGTACCTCATGGAGGACTAGCTGAATTTCCTGAGGCCGTCCTTAATGCGAAGCGCCTTGACCTATATAACTTGTACAAAGAGGTGGTGTCTAGGGGTGGCTTTTATGTAGGCAATGGTATAAACTGGAAGGGTCAAGTCTTCTCGAAGATGCGTAACCATACTGTGACAAATAGAATGACCGGTGTTGGAAACACACTGAAAAGACATTACGAAACATATTTACTGGAATATGAGCTAGCTCATGATGATGTAGACGGGGAATGCTGTTTGCTTTGCCACAGTAGCGCTCCTGGAGATTGGGTGAACTGTGGTTTGTGTGGTGAATGGGCACATTTTGGTTGTGACAGACGACAAGGCCTAGGCACTTTCAAGGATTATGCAAAGACAGATGGGCTGGAATACATCTGCCCTCACTGTAGTCTAGCAAACTATAAGAAGAAACCTCCTCCCCAAAAGGTAGCTAATGGCTTTGCGAATACAGTGTCTGTATCACGAAATGTTTAG
More
|
|||||||
| Protein seq | MSQIQSFSRQNCVLLAVLCGKHAEKRAQARSGPEAKWLRPSYPFPELSSSGRLEVHTLFNPTPEQFLEAQRVVQPNFLYIQGQQLEDEKEIGSLVWGDNDVSDPQAFSCLISPPFPTIVYLEVPIGEKLAQAVHSKGIPYVIYWRNSFSSYAASHFRHALMSVVQSSVSHTWDAFQLAHASFRLYCVRNNHVQSVKLGPRLLGDAPKINITPPENEMVEEEGSSDVFPAIKIYDDDINMKFLLCGVPSTPDPCLLGSLEDGLNALLNIEVWNKALQLYYSGVQTSESNQFLLGVDKLFQKIASPPPLHAASLPRGMVTMRCDITTCSSSHVSLLVSGSAQTCFDDQLLESHIKDEIIEKSQLVHALPNNDDKLSSSVPFTSMSTACGASTFEVWMTLPKWAAQVLKHLAPDISYRSLVALGIGCINGTPVASFDRRDADRLLFFCTNQHKHLAIENGPYFHLPRWSASLTKERVKVGLESKPNLLGANGIPEDKKRLIEGPSSSSKAKLKPATMRPIPHSRKQQMHPFMGFLEATVHETSQVKPNLPAAPPVKHNSVPAAPATHRKSTSGPSHAQSIIQLNPLPLKKHGCDRLPIQICSEEDFLKDVMQFLIQRGHNRLVPHGGLAEFPEAVLNAKRLDLYNLYKEVVSRGGFYVGNGINWKGQVFSKMRNHTVTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAPGDWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGLEYICPHCSLANYKKKPPPQKVANGFANTVSVSRNV
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_09G0265300 | OsMH63_09T0265300-mRNA-2 | Chr09 | 17401617 | 17408684 | - | maker | ||
| CDS seq | ATGTCGCAAATCCAGAGCTTCTCGCGGCAGAACTGCGTGCTCCTCGCGGTGCTGTGTGGGAAGCACGCTGAGAAGCGTGCCCAGGCGAGGTCGGGGCCGGAGGCGAAGTGGCTGAGGCCGTCGTACCCGTTCCCAGAGCTCAGCTCGTCGGGGAGATTGGAGGTGCACACGCTGTTCAACCCGACACCAGAGCAGTTCCTCGAGGCGCAGCGCGTGGTTCAGCCCAACTTCTTGTACATCCAGGGGCAACAGCTTGAGGATGAGAAGGAGATTGGCTCGCTCGTCTGGGGGGACAATGACGTATCTGATCCGCAGGCGTTTAGTTGTCTCATCAGCCCGCCATTTCCGACCATAGTTTATCTGGAGGTTCCAATTGGTGAAAAACTTGCTCAAGCAGTTCATTCAAAGGGGATTCCATACGTAATATACTGGAGAAATTCATTTTCATCATATGCAGCATCCCATTTTCGCCATGCATTAATGTCAGTGGTTCAAAGTTCGGTGAGCCATACTTGGGATGCTTTTCAGCTTGCTCATGCATCCTTTCGATTATACTGTGTAAGAAACAACCATGTACAAAGTGTTAAGCTTGGGCCTCGTCTACTAGGGGATGCTCCAAAGATAAATATAACCCCTCCTGAGAATGAGATGGTTGAGGAGGAAGGTTCTTCAGATGTGTTTCCAGCTATAAAAATTTATGATGATGACATCAACATGAAATTTCTTCTTTGTGGAGTTCCTAGCACACCGGATCCTTGTTTGTTAGGTTCATTAGAAGATGGCCTGAATGCACTTCTGAATATTGAAGTATGGAATAAAGCATTGCAGCTCTACTATTCGGGGGTGCAAACTTCAGAATCGAATCAGACTTCTTTCATATGTGGCAGTGCTTCTCCACCACCACTTCATGCTGCATCCTTACCACGTGGAATGGTTACAATGCGTTGCGACATCACTACATGCAGTTCTTCTCATGTGTCACTTCTTGTTTCTGGTAGCGCACAAACTTGTTTTGATGACCAGCTTTTGGAAAGCCACATCAAGGATGAGATCATTGAGAAGAGCCAACTAGTCCATGCTCTGCCAAATAATGATGATAAGTTATCATCAAGTGTGCCTTTCACTTCAATGTCCACAGCTTGTGGGGCTTCTACCTTTGAAGTTTGGATGACCCTTCCTAAGTGGGCAGCACAGGTTCTGAAGCATTTAGCGCCAGACATCTCATACAGGAGCTTAGTGGCACTTGGAATTGGTTGTATAAATGGCACGCCTGTTGCTTCATTTGATAGGCGAGATGCAGACCGCCTTCTTTTCTTTTGTACAAATCAACACAAACATTTGGCTATTGAAAATGGCCCATACTTTCATCTGCCAAGATGGTCAGCATCTCTTACCAAGGAAAGAGTGAAGGTGGGTCTGGAATCGAAACCAAATTTGTTAGGTGCGAATGGAATTCCTGAGGACAAGAAACGTCTGATCGAAGGGCCTTCCTCATCTTCCAAGGCAAAATTGAAGCCTGCAACTATGAGGCCCATTCCTCACTCTAGAAAGCAACAAATGCATCCTTTTATGGGTTTCCTGGAAGCTACTGTTCATGAAACTAGTCAGGTTAAGCCAAACTTGCCAGCTGCTCCCCCAGTGAAGCATAATTCGGTACCTGCTGCTCCAGCAACACATAGAAAATCAACTTCAGGGCCATCTCATGCTCAGTCAATCATTCAACTGAACCCACTGCCTCTGAAAAAACATGGATGTGATCGGTTGCCTATTCAGATATGCTCTGAGGAGGACTTCTTGAAGGATGTCATGCAGTTTTTAATTCAGAGGGGTCATAATCGACTCGTACCTCATGGAGGACTAGCTGAATTTCCTGAGGCCGTCCTTAATGCGAAGCGCCTTGACCTATATAACTTGTACAAAGAGGTGGTGTCTAGGGGTGGCTTTTATGTAGGCAATGGTATAAACTGGAAGGGTCAAGTCTTCTCGAAGATGCGTAACCATACTGTGACAAATAGAATGACCGGTGTTGGAAACACACTGAAAAGACATTACGAAACATATTTACTGGAATATGAGCTAGCTCATGATGATGTAGACGGGGAATGCTGTTTGCTTTGCCACAGTAGCGCTCCTGGAGATTGGGTGAACTGTGGTTTGTGTGGTGAATGGGCACATTTTGGTTGTGACAGACGACAAGGCCTAGGCACTTTCAAGGATTATGCAAAGACAGATGGGCTGGAATACATCTGCCCTCACTGTAGTCTAGCAAACTATAAGAAGAAACCTCCTCCCCAAAAGGTAGCTAATGGCTTTGCGAATACAGTGTCTGTATCACGAAATGTTTAG
More
|
|||||||
| Protein seq | MSQIQSFSRQNCVLLAVLCGKHAEKRAQARSGPEAKWLRPSYPFPELSSSGRLEVHTLFNPTPEQFLEAQRVVQPNFLYIQGQQLEDEKEIGSLVWGDNDVSDPQAFSCLISPPFPTIVYLEVPIGEKLAQAVHSKGIPYVIYWRNSFSSYAASHFRHALMSVVQSSVSHTWDAFQLAHASFRLYCVRNNHVQSVKLGPRLLGDAPKINITPPENEMVEEEGSSDVFPAIKIYDDDINMKFLLCGVPSTPDPCLLGSLEDGLNALLNIEVWNKALQLYYSGVQTSESNQTSFICGSASPPPLHAASLPRGMVTMRCDITTCSSSHVSLLVSGSAQTCFDDQLLESHIKDEIIEKSQLVHALPNNDDKLSSSVPFTSMSTACGASTFEVWMTLPKWAAQVLKHLAPDISYRSLVALGIGCINGTPVASFDRRDADRLLFFCTNQHKHLAIENGPYFHLPRWSASLTKERVKVGLESKPNLLGANGIPEDKKRLIEGPSSSSKAKLKPATMRPIPHSRKQQMHPFMGFLEATVHETSQVKPNLPAAPPVKHNSVPAAPATHRKSTSGPSHAQSIIQLNPLPLKKHGCDRLPIQICSEEDFLKDVMQFLIQRGHNRLVPHGGLAEFPEAVLNAKRLDLYNLYKEVVSRGGFYVGNGINWKGQVFSKMRNHTVTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAPGDWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGLEYICPHCSLANYKKKPPPQKVANGFANTVSVSRNV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 15.484383 | 27.843816 | 26.8356285 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0434000 | RBH | 9.290473 | 8.685448 | 7.997252 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g26390 | RBH | 4.119591 | 3.682681 | 2.252708 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0434000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0011370 | RBH | 1.726811 | 22.975082 | 14.094889 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0011310 | RBH | 1.368246 | 5.001208 | 6.896978 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0011570 | RBH | 4.138577 | 11.443347 | 20.078833 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0011340 | RBH | 0.579224 | 0.381976 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0011530 | RBH | 25.965929 | 15.989985 | 45.369949 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0011490 | RBH | 1.146675 | 1.859907 | 4.005430 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0255200 | RBH | 28.645177 | 36.7060395 | 49.7846125 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0011450 | RBH | 1.158750 | 0.460683 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0011250 | RBH | 2.076062 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0011340 | RBH | 24.961348 | 24.815933 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0011140 | RBH | 2.230339 | 0.0 | 3.536557 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0011240 | RBH | 0.928621 | 10.659594 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G011750 | RBH | 2.257822 | 7.069057 | 8.507585 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0011550 | RBH | 5.350389 | 30.126709 | 19.420559 |
| Os XI: R9311 | R9311 | AGIS | R9311C09g31921 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_09g0152000 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_09g0150300 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_09g0139400 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_09g0152400 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0916889400.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0931032600.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_034325 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0927930600.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0929675000.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0921355800.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0925455800.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0925699200.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0919444200.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0917507800.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0915027600.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0921522000.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0929729400.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0920055400.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0926085400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0917164400.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0916872800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0917811000.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0925003000.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0917520200.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0919534800.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0937958200.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0925385400.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0920808800.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0915773400.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0921329800.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0923391200.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0926339000.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0923489800.01 | RBH | None | None | None |
