Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0376900 | OGI:08068320 | 49/50 | Minghui 63 | MH63RS3 | HZAU | Chr08:25528548-25531128 | ||||||||
| Gene Symbol | ZHD2,OsZHD2 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | CCCGTCTTTCTCTCCCCCGGCCTTTCCTTCAAAAGATAAAGGAGAGGCAGCTTGCAAGGCTGGCTCCCGGCCCCCGGCCCCGGCACGGCCGTCTCCTTCCTTTCCGGCCGTGGAGCCTACCATTTTACCTTGCGAGCCGCGCCATTGGCGGATGCCATGATGCTCTCAATTCCTATCCCTCTCGCCAAGCATACCGCATGGTGATCATGGCCAGGACATAAATGTGCATGCTAGCCTGCGAGCTAGTAGACGGGAGGAGCTCGTCGTGATCATCAATGGCGTATCACGAATTCGATCGCAATGAATGCAACGGCCTCGTTTAATAAAAGCAGAAAGGTGGATCGATGTTGCCACGAAGTAAATGGCATGAGCAGAAATGCACATTGCTGCAAGCAAGCAAAGAGAGTAGCAAGACAACAAGCAGTAGTGTAGAGTAAAAGAGAGGACGAGGCTTCATTGAATTCACATAGGCTAAATTCTAAAAAGTCCCCGGCCATTGCTATAGCTTCTGCAAGCTCTGCGTCCTAACACATGGGCAGCAATGCGGCATCACTGCTCGCGAGATGTGGAAGACGAGTAAATGCAGCGGATACAGTGAGATCGAGAACTCGGAAGAAAAATGCAGCGAACATGGTAGCTAGAGAAATTGGAATTTCAGAGTAGACAGGTGAAGCGGACGGATCATGGACAAGTTGGTGCCCAGGTCTGGAAATTGGAAGCGAGGGAGATCGATGTGAATGCAACAGTGTTGCAGCTCATATAGTTGCAGCCGACCTTTCTGAATCTTTATCTGCCCTAGTTGTTAGCTAGACGAACTACAAGTGCTACTGATGATGAAGTGCCAAGCACAAGAAATATAGGGGAAAAGAAATGATGAAACAAACAAACCGTGCAGCAACCCAAATCCCCAGGAAGGAAATTTCAATTGCAACACAAAAGTACTACATTCCCAAGATCTAAATCGATCGGCAAATCGCCATCCATGTCCTCTTCCTTCCCAACACCAAACGTCGTCGTCATCATCTACTAGGAAACAACAACGACGGCAACCACAAGCCCAAAGAACCCAACCACAATGGAATAAAATAACGAAAAAGAAACAAGGAAGGATGCAAAAGCAGCAGCAGCAGCAACCACCACCTCCCCTAAAACCAACAAGAACAGCTTGCTCGCTACGAACCTAGCTAAGCTTCTACTCAGGTGAGGTAAAAGAAGGCAAAGAAAAAGGCTAATTAGCCGCGGGTAAGGAGGTAGTAGAAGTAGATGGAGATGGTGATGCATGCAGTTGCAGTTGCAGTGCAGGTACCTAGCACCGGGAGGAGATGAGCTGAGCTGAGCTTGCTTGGCTTAGCTTAGCTATGGCGCCTTCTTGCCCAGGGTGTGCTTGTTGTTGTGCATCCAAACCTTGAGGACATGGCGCTTGACGCAGACCTCCTCGCAGAACTGCTGCACGGCGGCCTCGTCGTGCTTCTGGATGCGCCACCCGAGCCGCTCCGCGAAGGCGAGCATCTTGTCCTTCTGCTCCTGCGTGAACTTTGTGCGGAACCGCTTCTTGCCGGAGCCGGAGCCGGAGGGGCCGGCGGAGCCGAGGGACATGCCGACCATGGGGCCAATCACCATGGGGCCGACCATCCCGGACATGTCGTCGCCCTCGTCGCGTCCCGAGTGGGAGGTGGACGGCAGCGCGAGGGGCCGCTGCGGGTAGCCGCCCGCTGCGGCGGCGGCCGCGGCCGCCGCCGCGGCCGCCATCTGGTGCTGCTGGTGGTGGAGGTACCCTGCCGGGGTGCGGTAGTAGGGGGAGAACTGGTGGTGCGGCGAGGCGCCGTAGGCCGAGATGGCGGCGGGGGACACGGCGGAAGGCTCGGCCGGCCCGACGCCCGTGGGGGACTCCGACTCCTTGCGGTGGAAGTTACGGTGGCAGCCGCAGGCGGCGCAGCGGAGCGCGTCGATGGAGCCCTCCTCGCCGGAAGCCATGAACTCGCCGCAGCCGTCCACGGCGTGCCCGCCGATGCCGACGGCGTGGTTCTTGAGGCACTCCCGATACCTCGCCCCTCCTCCTCCACCACCACCACCACCACCGCCGCCGCCGCCGACTCCACCTCCCGGCTTGGGCACCCCGCCACCGCCACCTCCAAGCCCGGGCTGCATCGGCGCGTCGTAGCCCGAGCTCAGAGGCATCGGAGGCATCTCCTCGTCGCCGTCACCCTCGTCATGGTCGTCGAAATCCATGGCCGCCGACCGACCGACCGGCCGGCCACCCCCTTTCTTTTCCCTCCCTTTTGGATTTCTCGGGTGTGTTCTTGGCGAGCTTAAGAAAAGCTTAGGGAGTAATAGAGGAAGGAGACGAGGCTATGAGCAAGTATAGGGGAGTGTGAAACTGTGGACACACACCTGCTAATTTTGACGCGCCGCTGCAAGCAGCAGCTGCTGCTGTTGCTGCTGTACCCTTCAGCTAGTAGGAGTAGCTAGCTAGATGATGCAATAAACTCTCTCTCACTCACTAGTGAGAGTGTTACTAGTAGTACTTGTCTGGGGCGCACCTGTCGCGCCGGGGCAATGACGGGGCGGTGTGTGAGTGAAG
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| CDS seq | ATGGATTTCGACGACCATGACGAGGGTGACGGCGACGAGGAGATGCCTCCGATGCCTCTGAGCTCGGGCTACGACGCGCCGATGCAGCCCGGGCTTGGAGGTGGCGGTGGCGGGGTGCCCAAGCCGGGAGGTGGAGTCGGCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGAGGAGGAGGGGCGAGGTATCGGGAGTGCCTCAAGAACCACGCCGTCGGCATCGGCGGGCACGCCGTGGACGGCTGCGGCGAGTTCATGGCTTCCGGCGAGGAGGGCTCCATCGACGCGCTCCGCTGCGCCGCCTGCGGCTGCCACCGTAACTTCCACCGCAAGGAGTCGGAGTCCCCCACGGGCGTCGGGCCGGCCGAGCCTTCCGCCGTGTCCCCCGCCGCCATCTCGGCCTACGGCGCCTCGCCGCACCACCAGTTCTCCCCCTACTACCGCACCCCGGCAGGGTACCTCCACCACCAGCAGCACCAGATGGCGGCCGCGGCGGCGGCCGCGGCCGCCGCCGCAGCGGGCGGCTACCCGCAGCGGCCCCTCGCGCTGCCGTCCACCTCCCACTCGGGACGCGACGAGGGCGACGACATGTCCGGGATGGTCGGCCCCATGGTGATTGGCCCCATGGTCGGCATGTCCCTCGGCTCCGCCGGCCCCTCCGGCTCCGGCTCCGGCAAGAAGCGGTTCCGCACAAAGTTCACGCAGGAGCAGAAGGACAAGATGCTCGCCTTCGCGGAGCGGCTCGGGTGGCGCATCCAGAAGCACGACGAGGCCGCCGTGCAGCAGTTCTGCGAGGAGGTCTGCGTCAAGCGCCATGTCCTCAAGGTTTGGATGCACAACAACAAGCACACCCTGGGCAAGAAGGCGCCATAG
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| Protein seq | MDFDDHDEGDGDEEMPPMPLSSGYDAPMQPGLGGGGGGVPKPGGGVGGGGGGGGGGGGGGARYRECLKNHAVGIGGHAVDGCGEFMASGEEGSIDALRCAACGCHRNFHRKESESPTGVGPAEPSAVSPAAISAYGASPHHQFSPYYRTPAGYLHHQQHQMAAAAAAAAAAAAGGYPQRPLALPSTSHSGRDEGDDMSGMVGPMVIGPMVGMSLGSAGPSGSGSGKKRFRTKFTQEQKDKMLAFAERLGWRIQKHDEAAVQQFCEEVCVKRHVLKVWMHNNKHTLGKKAP |
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| Function | Zinc-finger homeodomain protein 2 [UniProtKB/Swiss-Prot:Q6ZB90] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0376900 | OsMH63_08T0376900.1 | Chr08 | 25528548 | 25531128 | - | maker | ||
| CDS seq | ATGGATTTCGACGACCATGACGAGGGTGACGGCGACGAGGAGATGCCTCCGATGCCTCTGAGCTCGGGCTACGACGCGCCGATGCAGCCCGGGCTTGGAGGTGGCGGTGGCGGGGTGCCCAAGCCGGGAGGTGGAGTCGGCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGAGGAGGAGGGGCGAGGTATCGGGAGTGCCTCAAGAACCACGCCGTCGGCATCGGCGGGCACGCCGTGGACGGCTGCGGCGAGTTCATGGCTTCCGGCGAGGAGGGCTCCATCGACGCGCTCCGCTGCGCCGCCTGCGGCTGCCACCGTAACTTCCACCGCAAGGAGTCGGAGTCCCCCACGGGCGTCGGGCCGGCCGAGCCTTCCGCCGTGTCCCCCGCCGCCATCTCGGCCTACGGCGCCTCGCCGCACCACCAGTTCTCCCCCTACTACCGCACCCCGGCAGGGTACCTCCACCACCAGCAGCACCAGATGGCGGCCGCGGCGGCGGCCGCGGCCGCCGCCGCAGCGGGCGGCTACCCGCAGCGGCCCCTCGCGCTGCCGTCCACCTCCCACTCGGGACGCGACGAGGGCGACGACATGTCCGGGATGGTCGGCCCCATGGTGATTGGCCCCATGGTCGGCATGTCCCTCGGCTCCGCCGGCCCCTCCGGCTCCGGCTCCGGCAAGAAGCGGTTCCGCACAAAGTTCACGCAGGAGCAGAAGGACAAGATGCTCGCCTTCGCGGAGCGGCTCGGGTGGCGCATCCAGAAGCACGACGAGGCCGCCGTGCAGCAGTTCTGCGAGGAGGTCTGCGTCAAGCGCCATGTCCTCAAGGTTTGGATGCACAACAACAAGCACACCCTGGGCAAGAAGGCGCCATAG
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| Protein seq | MDFDDHDEGDGDEEMPPMPLSSGYDAPMQPGLGGGGGGVPKPGGGVGGGGGGGGGGGGGGARYRECLKNHAVGIGGHAVDGCGEFMASGEEGSIDALRCAACGCHRNFHRKESESPTGVGPAEPSAVSPAAISAYGASPHHQFSPYYRTPAGYLHHQQHQMAAAAAAAAAAAAGGYPQRPLALPSTSHSGRDEGDDMSGMVGPMVIGPMVGMSLGSAGPSGSGSGKKRFRTKFTQEQKDKMLAFAERLGWRIQKHDEAAVQQFCEEVCVKRHVLKVWMHNNKHTLGKKAP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.1713145 | 0.049459 | 4.5865905 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0479400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g37400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0479400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0019610 | RBH | 0.0 | 0.0 | 0.593885 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0019530 | RBH | 0.0 | 0.0 | 0.155024 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0019430 | RBH | 0.0 | 0.0 | 0.965156 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0019630 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0019490 | RBH | 0.0 | 0.0 | 1.098890 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0296200 | RBH | 2.8584855 | 0.0188195 | 7.0523605 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0019410 | RBH | 0.0 | 0.0 | 0.057110 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0396600 | RBH | 1.1503905 | 0 | 25.6511595 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0018720 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0019000 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0018840 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0019680 | RBH | 0.0 | 0.0 | 0.077784 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0019060 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G019230 | RBH | 0.0 | 0.0 | 1.163558 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0019380 | RBH | 0.0 | 0.0 | 0.760790 |
| Os XI: R9311 | R9311 | AGIS | R9311C08g29957 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_08g0237400 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_08g0249500 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_08g0223800 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_08g0242800 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0814675400.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0828908800.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0825868600.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0827842400.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0819394800.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0823003000.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0823765400.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0818258400.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0815608400.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0813970600.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0819614000.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0827631600.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0819005400.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0823627600.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0816653600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0814772800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0815500800.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0822776000.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0816316600.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0817887800.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0834739000.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0821727100.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0818938400.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0814032800.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0819590000.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0819391100.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0824243200.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0821036200.01 | RBH | None | None | None |
