Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0338700 | OGI:08062350 | 48/50 | Minghui 63 | MH63RS3 | HZAU | Chr08:23086575-23088141 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | CTAGAACACTACCCCACCTAGGACTCCGATTAGCACATCATCATCATCATTATCCATGCACACCCAGATTAGCTCAAGAACAAAGCTAGTAATCACTGTACTTAGTGGTAGTACTAATTGTCCCTGCATCATCCATTGACATCTCTTCATCAGATCCAAAAAAAAAAAGGCCACATTTTTGTTTATGAATCTAATCTTTGCTTGGGCCTCACCATTAGAGCAAAAGCTAATTTGCTGCTGCTACTACTACTACTTGCTAGGTTGACTGATGAGTCATTTCATTAGCCATTAGGGTTGGTTAATTAGACAGGAAAAAGGCTACAAAAAAAGAGAGAAAAAAAGAAAAGAAAAGAAAGAGACAACCTTGATTCGACTGTGCTACTAGTCTTGATTAAGTCGACTGCGGCGAGCCGCCGCCGCCGCCACTCGCCGTTGCCGCGGCGTGGTCGGCGGCGGCGGCATGCGTGGATGAGCCGTTGATGCTGAAGTCAGTGAGCACTGGTGGTGGGGCGAGTGGCGCGGCGGCGGCGGCGGCGGCGGCGGAGCGGCGGGCGCTGTGGCCGCCGAGGAAGTTGTGCTTGTTGTTGTGCATCCAGACCTTGAAGACGCCCTTGCCGACGCCGATCTCGCGGCAGCACTCGTCGACGACGGCCTCGTCGCGCTTCTGGAGGCGCCACCCGAGCCGCTCCGACAGCGCCTGCATCCGCTGCTTCTGCTCCGGGCTGAACTTGGTCCGGAACCGCTTCCTCGACGCCGACGTCGCGGCGCCCGGCGGAGGCGGGGGCCCCATGGCGGCGGCGGCGGCGTGGGGCCTCGACGCCGCCACGGCCGGGGCGGACGCGGAGCCAAGCGACAGCAGCATGTGCGTCGCGGAGGGGAGGTACCCCGGAGAGAGCACCGGTGGCGGCGCCTGCAGCGGCGAGGCGGAGCGGTCGTCGTCGTAGTCGGACATCTCGGAGTCCTCGGAATCATCATCGTCGGCGGCGGCGTCGTCGTCGTGGTGGTGCCCGGGCCCGCGCACGCGGTCGGTCTCCGGCGACTGCTCGCGACGCTGGTGGCTCCCATGCAGCAGCAGCTGCGGCGCCACCGCCACCGCCACCGCCGCGGTCCGCGGCAGATGCTGCTGAGGCTGCGGCGGCGGCGGTGGCGGTGGCGGTGGCGGCGGTGGCGGAGGCAGCGCGAGGAGAGGCGGGGAGGGCGGCGCCTCGGGGAGCCGGCGGTGGAAGTTGCGGTGGCACCCACACGCGGCGCACTTGAGCGACGCCGGATCAGCGGCATCCGCCGCCGGCGACGGCATGAACTCCCCGCACCCATCCACCGCGTGCCCGCCCAAGCTCGCCGCGTGATTCTTCAAGCACTCCCTGTACACCGCCGCCGTCGCCGACGCCGGCGTCGCCTTGCTCTTCCCCGCCGCCGCCGCCGCCGCGCCGCCGTTGGGGAACACCACCGGCCTGTACTTGACGCCGACGACGGCCTCCATCGCCAGAGCACGTTCGGTTCTTGAGAGAGAGATCAACTCAGCTCACCGCGCGGGTTTTATCATCCATGGGAGAAGGACAAGGAGAAG
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| CDS seq | ATGGAGGCCGTCGTCGGCGTCAAGTACAGGCCGGTGGTGTTCCCCAACGGCGGCGCGGCGGCGGCGGCGGCGGGGAAGAGCAAGGCGACGCCGGCGTCGGCGACGGCGGCGGTGTACAGGGAGTGCTTGAAGAATCACGCGGCGAGCTTGGGCGGGCACGCGGTGGATGGGTGCGGGGAGTTCATGCCGTCGCCGGCGGCGGATGCCGCTGATCCGGCGTCGCTCAAGTGCGCCGCGTGTGGGTGCCACCGCAACTTCCACCGCCGGCTCCCCGAGGCGCCGCCCTCCCCGCCTCTCCTCGCGCTGCCTCCGCCACCGCCGCCACCGCCACCGCCACCGCCGCCGCCGCAGCCTCAGCAGCATCTGCCGCGGACCGCGGCGGTGGCGGTGGCGGTGGCGCCGCAGCTGCTGCTGCATGGGAGCCACCAGCGTCGCGAGCAGTCGCCGGAGACCGACCGCGTGCGCGGGCCCGGGCACCACCACGACGACGACGCCGCCGCCGACGATGATGATTCCGAGGACTCCGAGATGTCCGACTACGACGACGACCGCTCCGCCTCGCCGCTGCAGGCGCCGCCACCGGTGCTCTCTCCGGGGTACCTCCCCTCCGCGACGCACATGCTGCTGTCGCTTGGCTCCGCGTCCGCCCCGGCCGTGGCGGCGTCGAGGCCCCACGCCGCCGCCGCCGCCATGGGGCCCCCGCCTCCGCCGGGCGCCGCGACGTCGGCGTCGAGGAAGCGGTTCCGGACCAAGTTCAGCCCGGAGCAGAAGCAGCGGATGCAGGCGCTGTCGGAGCGGCTCGGGTGGCGCCTCCAGAAGCGCGACGAGGCCGTCGTCGACGAGTGCTGCCGCGAGATCGGCGTCGGCAAGGGCGTCTTCAAGGGACAATTAGTACTACCACTAAGTACAGTGATTACTAGCTTTGTTCTTGAGCTAATCTGGGTGTGCATGGATAATGATGATGATGATGTGCTAATCGGAGTCCTAGGTGGGGTAGTGTTCTAG
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| Protein seq | MEAVVGVKYRPVVFPNGGAAAAAAGKSKATPASATAAVYRECLKNHAASLGGHAVDGCGEFMPSPAADAADPASLKCAACGCHRNFHRRLPEAPPSPPLLALPPPPPPPPPPPPPPQPQQHLPRTAAVAVAVAPQLLLHGSHQRREQSPETDRVRGPGHHHDDDAAADDDDSEDSEMSDYDDDRSASPLQAPPPVLSPGYLPSATHMLLSLGSASAPAVAASRPHAAAAAMGPPPPPGAATSASRKRFRTKFSPEQKQRMQALSERLGWRLQKRDEAVVDECCREIGVGKGVFKGQLVLPLSTVITSFVLELIWVCMDNDDDDVLIGVLGGVVF |
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| Function | Zinc-finger homeodomain protein 10 [UniProtKB/Swiss-Prot:Q6Z528] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0338700 | OsMH63_08T0338700-mRNA-1 | Chr08 | 23086575 | 23088141 | - | maker | ||
| CDS seq | ATGGAGGCCGTCGTCGGCGTCAAGTACAGGCCGGTGGTGTTCCCCAACGGCGGCGCGGCGGCGGCGGCGGCGGGGAAGAGCAAGGCGACGCCGGCGTCGGCGACGGCGGCGGTGTACAGGGAGTGCTTGAAGAATCACGCGGCGAGCTTGGGCGGGCACGCGGTGGATGGGTGCGGGGAGTTCATGCCGTCGCCGGCGGCGGATGCCGCTGATCCGGCGTCGCTCAAGTGCGCCGCGTGTGGGTGCCACCGCAACTTCCACCGCCGGCTCCCCGAGGCGCCGCCCTCCCCGCCTCTCCTCGCGCTGCCTCCGCCACCGCCGCCACCGCCACCGCCACCGCCGCCGCCGCAGCCTCAGCAGCATCTGCCGCGGACCGCGGCGGTGGCGGTGGCGGTGGCGCCGCAGCTGCTGCTGCATGGGAGCCACCAGCGTCGCGAGCAGTCGCCGGAGACCGACCGCGTGCGCGGGCCCGGGCACCACCACGACGACGACGCCGCCGCCGACGATGATGATTCCGAGGACTCCGAGATGTCCGACTACGACGACGACCGCTCCGCCTCGCCGCTGCAGGCGCCGCCACCGGTGCTCTCTCCGGGGTACCTCCCCTCCGCGACGCACATGCTGCTGTCGCTTGGCTCCGCGTCCGCCCCGGCCGTGGCGGCGTCGAGGCCCCACGCCGCCGCCGCCGCCATGGGGCCCCCGCCTCCGCCGGGCGCCGCGACGTCGGCGTCGAGGAAGCGGTTCCGGACCAAGTTCAGCCCGGAGCAGAAGCAGCGGATGCAGGCGCTGTCGGAGCGGCTCGGGTGGCGCCTCCAGAAGCGCGACGAGGCCGTCGTCGACGAGTGCTGCCGCGAGATCGGCGTCGGCAAGGGCGTCTTCAAGGGACAATTAGTACTACCACTAAGTACAGTGATTACTAGCTTTGTTCTTGAGCTAATCTGGGTGTGCATGGATAATGATGATGATGATGTGCTAATCGGAGTCCTAGGTGGGGTAGTGTTCTAG
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| Protein seq | MEAVVGVKYRPVVFPNGGAAAAAAGKSKATPASATAAVYRECLKNHAASLGGHAVDGCGEFMPSPAADAADPASLKCAACGCHRNFHRRLPEAPPSPPLLALPPPPPPPPPPPPPPQPQQHLPRTAAVAVAVAPQLLLHGSHQRREQSPETDRVRGPGHHHDDDAAADDDDSEDSEMSDYDDDRSASPLQAPPPVLSPGYLPSATHMLLSLGSASAPAVAASRPHAAAAAMGPPPPPGAATSASRKRFRTKFSPEQKQRMQALSERLGWRLQKRDEAVVDECCREIGVGKGVFKGQLVLPLSTVITSFVLELIWVCMDNDDDDVLIGVLGGVVF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.5820035 | 5.8952785 | 34.3809585 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0438400 | RBH | 2.147436 | 1.962626 | 2.203015 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g34010 | RBH | 1.023728 | 0.642046 | 0.380644 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0438400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0017350 | RBH | 0.634780 | 0.0 | 1.252375 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0017230 | RBH | 0.249179 | 0.0 | 0.890352 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0017180 | RBH | 3.248115 | 0.0 | 1.231000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0017480 | RBH | 0.185413 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0017320 | RBH | 9.498600 | 2.140794 | 6.107295 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0249500 | RBH | 17.6649395 | 3.061816 | 8.304411 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0017220 | RBH | 0.405101 | 0.099441 | 0.678051 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0358900 | RBH | 5.1806105 | 9.889608 | 34.9502115 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0016590 | RBH | 0.140816 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0016860 | RBH | 0.487525 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0016670 | RBH | 12.224355 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0017490 | RBH | 0.865432 | 0.072298 | 0.694412 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0016890 | RBH | 0.572485 | 0.856837 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G017050 | RBH | 0.981299 | 0.0 | 0.499292 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0017150 | RBH | 2.567914 | 1.124185 | 1.138191 |
| Os XI: R9311 | R9311 | AGIS | R9311C08g29711 | SBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_08g0210900 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_08g0221500 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_08g0199100 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_08g0214900 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0814516200.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0828686400.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_034189 | SBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0825648800.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0827610600.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0819178600.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0822737200.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0823529800.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0818103000.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0815459800.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0813830800.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0819391600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0827408400.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0818864400.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0823355400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0816591400.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0814614400.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0815235800.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0822508600.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0816166000.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0817717000.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0834518200.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0821949500.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0818714200.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0813891800.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0819449800.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0819614100.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0824021600.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0820766400.01 | RBH | None | None | None |
