Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0337800 | OGI:08062230 | 48/50 | Minghui 63 | MH63RS3 | HZAU | Chr08:23029351-23031156 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | |||||||||||
| DNA seq | CGCCCCCCCCCCCCATTGCCGTCTCGGTTGGACTCCTGTCTCTCTCTTGCTTCCCTACCTTCTCCTTCCTCCTCCTCCCCTTGATTGCTAGGTCGGTCTCTAGGCGGAGGTGGTGAAGTGGAGTGGAGTGGAGAGTATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCATCGTCGTCGGAGTTGGAGGAGGTGGTGCCGTGGTGGGGATTGATGGGGAGGCCGCCGTGCTGCGTGAAGGCGGAGGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACCTCATGCTCGTCGCCTACGTCCAGGAGCACGGCCCGGGCAACTGGCGCGCCGTGCCCACCAACACCGGTGAGCCACCACCACCACCGATCCCCTTTGGTTTTTGTCGCCGGCGGTGGGCGGTGTTCTGATCGACCGGCCGGCGATGGTTGTGCGTGTGTGCAGGGCTGATGCGGTGCAGCAAGAGCTGCCGGCTCCGGTGGACCAACTACCTCCGGCCGGGGATCAAGCGGGGGAACTTCACCGACCAGGAGGAGAAGCTCATCGTCCACCTCCAGGCCCTCCTCGGCAACAGGTAATTTTTTTTTTGGTTTAATTTACGTCGTTTCGTGAATCGGAAGATGAAATTCTTGGCGATCGAGGTTGAGTGATTGATGGATGGGTTGGTTTTTGGAGCCCTAATTAAAGTGCGCGCTTGCGTTTTTTTTTTTGGCGGTTCTTGATTTTTGGTTAGGTGGGCGGCGATCGCGTCCTACTTGCCGGAGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACCTCAAGAAGAAGCTCAAGAAGATGAGCGCCACCGGCGGCGGCGGCGACGACGGCGAGGGAGGTGGCGCCGGCGAGGTGAAGACCAGGGCGGCTGCGCCGAAGGGGCAGTGGGAGCGGCGCCTGCAGACGGACATCCACACCGCGCGCCAGGCGCTCCGCGACGCGCTCTCGCTGGACCCCTCGCCGCCGGCCAAGCCGCTGGACTCGTCGTCGGGCGCCACGGCGCCGCCGTCGTCGCAGGCGGCGACGTCGTACGCATCCAGCGCCGAGAACATCGCGCGGCTCCTGGAGGGCTGGATGCGCCCCGGCGGCGGCGGCGGCAAGACGACGACGACGCCGTCCTCCGGGTCGAGGTCGTCGGCGGCGTCGGTGCTGTCCGGGGAGGCCAGCCACAGCGGCGGCGCCACGGCGCCGACGCCCGACGGCTCGACGGTCACCAGCAAGACGAAGGACGAGGAGACCGCCGGCGCGCCGCCGCCGCCGCCGCCGGCGTTCTCCATGCTGGAGAGCTGGCTGCTCGACGACGGCATGGGCCACGGCGAGGTGGGGCTCATGGACGTGGTGGTGCCATTGGGGGACCCGAGTGAGTTCTTTTAGTGCAAGTGAAAAAAGGAAAAAAAAATGAGGGGACAAAAAAAAGGTGACAATAAATGTGACTAGCCTTGAAGAACAAAGCCAATCAATCCTTGGTGATTTAGATCATCAAAAGCACAAAGCTGGTGTTGATCTAGCATAGTTAAATCTAGTTATATTCTCTCTTCTTCTTTTTGAGTTTTAATTCGTTGTTAGGGTTTGGAACTGATCATCTTAATTTGTAAGTTTCTATATAGTAGTCTATACTAATCCATGGTGGATGCATGACTTGGATCCATTGTGAGATGAGCCAGTCATGAAATGGAGGTTGGCAAACAATAGAAATGTACATCTTCTTTAATAACATAAATCTTATATATATATCAGTAGTACCAGTAAATGTTATAATATA
More
|
||||||||||
| CDS seq | MGRPPCCVKAEVKKGPWTPEEDLMLVAYVQEHGPGNWRAVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMSATGGGGDDGEGGGAGEVKTRAAAPKGQWERRLQTDIHTARQALRDALSLDPSPPAKPLDSSSGATAPPSSQAATSYASSAENIARLLEGWMRPGGGGGKTTTTPSSGSRSSAASVLSGEASHSGGATAPTPDGSTVTSKTKDEETAGAPPPPPPAFSMLESWLLDDGMGHGEVGLMDVVVPLGDPSEFF |
||||||||||
| Protein seq | MGRPPCCVKAEVKKGPWTPEEDLMLVAYVQEHGPGNWRAVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMSATGGGGDDGEGGGAGEVKTRAAAPKGQWERRLQTDIHTARQALRDALSLDPSPPAKPLDSSSGATAPPSSQAATSYASSAENIARLLEGWMRPGGGGGKTTTTPSSGSRSSAASVLSGEASHSGGATAPTPDGSTVTSKTKDEETAGAPPPPPPAFSMLESWLLDDGMGHGEVGLMDVVVPLGDPSEFF |
||||||||||
| Function | Myb-related protein 306 [UniProtKB/Swiss-Prot:P81392] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0337800 | OsMH63_08T0337800-mRNA-1 | Chr08 | 23029351 | 23031156 | + | maker | ||
| CDS seq | ATGGGGAGGCCGCCGTGCTGCGTGAAGGCGGAGGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACCTCATGCTCGTCGCCTACGTCCAGGAGCACGGCCCGGGCAACTGGCGCGCCGTGCCCACCAACACCGGGCTGATGCGGTGCAGCAAGAGCTGCCGGCTCCGGTGGACCAACTACCTCCGGCCGGGGATCAAGCGGGGGAACTTCACCGACCAGGAGGAGAAGCTCATCGTCCACCTCCAGGCCCTCCTCGGCAACAGGTGGGCGGCGATCGCGTCCTACTTGCCGGAGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACCTCAAGAAGAAGCTCAAGAAGATGAGCGCCACCGGCGGCGGCGGCGACGACGGCGAGGGAGGTGGCGCCGGCGAGGTGAAGACCAGGGCGGCTGCGCCGAAGGGGCAGTGGGAGCGGCGCCTGCAGACGGACATCCACACCGCGCGCCAGGCGCTCCGCGACGCGCTCTCGCTGGACCCCTCGCCGCCGGCCAAGCCGCTGGACTCGTCGTCGGGCGCCACGGCGCCGCCGTCGTCGCAGGCGGCGACGTCGTACGCATCCAGCGCCGAGAACATCGCGCGGCTCCTGGAGGGCTGGATGCGCCCCGGCGGCGGCGGCGGCAAGACGACGACGACGCCGTCCTCCGGGTCGAGGTCGTCGGCGGCGTCGGTGCTGTCCGGGGAGGCCAGCCACAGCGGCGGCGCCACGGCGCCGACGCCCGACGGCTCGACGGTCACCAGCAAGACGAAGGACGAGGAGACCGCCGGCGCGCCGCCGCCGCCGCCGCCGGCGTTCTCCATGCTGGAGAGCTGGCTGCTCGACGACGGCATGGGCCACGGCGAGGTGGGGCTCATGGACGTGGTGGTGCCATTGGGGGACCCGAGTGAGTTCTTTTAG
More
|
|||||||
| Protein seq | MGRPPCCVKAEVKKGPWTPEEDLMLVAYVQEHGPGNWRAVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMSATGGGGDDGEGGGAGEVKTRAAAPKGQWERRLQTDIHTARQALRDALSLDPSPPAKPLDSSSGATAPPSSQAATSYASSAENIARLLEGWMRPGGGGGKTTTTPSSGSRSSAASVLSGEASHSGGATAPTPDGSTVTSKTKDEETAGAPPPPPPAFSMLESWLLDDGMGHGEVGLMDVVVPLGDPSEFF
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.899317 | 0 | 1.6373005 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0437300 | RBH | 0.103888 | 0.0 | 2.862097 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g33940 | RBH | 0.045927 | 0.0 | 0.680479 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0437300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0017320 | RBH | 0.0 | 0.0 | 0.832555 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0017200 | RBH | 0.083365 | 0.0 | 0.401045 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0017150 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0017450 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0017290 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0249100 | RBH | 2.453075 | 0.1173925 | 4.080899 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0017190 | RBH | 0.0 | 0.0 | 0.245335 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0358000 | RBH | 3.930249 | 0.059361 | 1.0568235 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0016560 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0016830 | RBH | 0.168267 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0016640 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0017460 | RBH | 0.0 | 0.0 | 0.147865 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0016860 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G017020 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0017120 | RBH | 0.0 | 0.0 | 0.000000 |
| Os XI: R9311 | R9311 | AGIS | R9311C08g29710 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_08g0291700 | SBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_08g0221100 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_08g0198600 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_08g0214400 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0814512100.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0828681100.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_034187 | SBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0825642700.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0827604700.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0819172700.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0822730500.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0823523700.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0818099300.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0815456100.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0813827700.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0819385900.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0827402700.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0818861300.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0823348700.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0816590500.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0814609300.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0815228900.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0822501700.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0816162900.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0817713100.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0834512100.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0821955200.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0818708500.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0813888500.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0819446700.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0819620000.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0824016100.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0820759700.01 | RBH | None | None | None |
