Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0335600 | OGI:08061950 | 48/50 | Minghui 63 | MH63RS3 | HZAU | Chr08:22871822-22873983 | ||||||||
| Gene Symbol | DLN210,OsDLN210 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | CACTGCAAACTGATTTATGTACTGCTCTTGTTACTAACATATTAACTTCCAATCACTGTAACTAAACTTTGATCCACACTGAGCTCAGCTGTGAAAAATCAACCTTGCTCTTTAAATTACACTGCAAACCAATTCCATCTTTCATGGAAATCCCATTGGTCCCTAAAGCATCATTCACTAGCTGCATAATCCACACTACTACAGTTCTATATATTCTTGCACCTCAAGCATGCCACATGCATCTGCAGCTGGGCCAGCCACCAATTCGAATTCCATTTTTTTTTACAGGTACGTGAAACACAAGAACCAGATGCTTGCATAGCTATATATATATATATATAAGTTAAAGTAAAATATATATCATCATAGAATGAGGAGTAGCAGCAGCAGTAGCTGTTGCAGTAGCAGGCAGACATTGCTCAAAAGCCTGGTTGCTTGGCCCCAGCCTTGAAGGCCACCCCACCAATCATCCACTGCAGCAATGCACAGCAGCACATCATCACAGATGCTTCTGCTGCTTCTCTTCCTCCTCTGCCTCTACCTGTTCAGATCAATCTCTGATGAGCTTCCATCCTCTGCTCCTGCATATTCTTCTTCTTGTTCTTCTTCTTGATCTGCCTGGGTGTGCCTTTGCAGGAAGTTGAAGGTCCTCTTGCCCTGCACCGGCTGCTCGACGGTGCAATCGCTGGTGTGGAGCCGCTTGGACCCGGCGGCCTTGCTCTCGGCCTCCGACGACGACGTCGTAGTCACGCAGCTGTCGGTTGCGGCGGATTGGCGGTGGTGCCGTGGCGGGGAGGAGGAGGACATGCACTCGATGTCCACGGCGGAGGCGAGCTCCGAGAGCTCCGTCGTGGCGGCCTCCGGCGAGCTTGCCAGGCTATGGTCGGCCAGGACTTGCTGCGCCCTGCGTAGCACTGACTGCAGGTACCTCCCCTGTGCCTCCATCCTCAGTTGCAGATGCCTCTTGACCTGCCATGGATAATGGATTAATCAAAACTTGCTTGATCACTGATCAGCTAGACGACGACGAGATGACAATTGACAAATGACAACAATCTCGACGAACTCTGAACTTTTTTTTTTTACCTCAATCTGCTCCTGGAGCTTCCTCTGGACTTCCCTCTGCATCTGCACCATGCTCCTGGATGAATCACGGAGAGCTTCTTTAGCATCGCCATCGCTGTCGCCGTCGTAAGCAATGGTGCGCGGCTCATCGGCGGCGCTATCGCCGTCGTGGTCGGCTGGTTGGCGCTCCGACGAGGATGACCGGTCGTTCAGGCTGCCGCTGCCTCCGCCGCCTCCATTGCCGCCGCGGCTCACCGCCTGCCGGTACTTCTGCAGCAGCGGCAGAGAGCTTAACACTGTCAGAAACCAAGAACCGATGCAGACAGAGTTTGCGAGAAGCTGATCGGCTGCCGGAGAGAGCTCGCCGGCGGCGTGACGCACGCACGCACGCACCTGGAGGTGGCTCTTGAGGTGGTACAAGGTGAGCCCCGGCACGGCCATGGCCCTCAGCACGGACTTGGGCGTCGCCCCTGCAATGGCGCCAAGAAACAAAGCCGATCGATCAGCCATGCCCATGATCAATGATGTCAGAGGAGGAAGAAGAAGCAAGAAGGCGCGGGGGTGGGGCTTACTGTCCGCGCCGCCGAGCTCCGCCACGGCGAGGACGAACCGCTCGTGCAGCTGCCCGGTCCACCTGAGCCGCGCCCGGGCAGCGGCGGCGGCGGAGGCGGGGGCCTCACCGGCGTGCTGCTGCTGCTGCTGCGACGACATTTCCAGCGAGCCACCACTGCCCACCCCGGTGCGCGGTATCTCTTCAGGATCGGCGGCCTCTCCAGCATCAGAAGCCTCTGCCGGCGACCGATCACCCTCACCGGAGCCGATCGACGACGACGAAGACGAGCGAGCGATGCTGTTTACTGCTGCTGCTGCTGCTTCGTCGTCCAAGTAGCCGTGTGGCTGGGTGAGTTCTTATAGTGGAAGCTTCAAGCTTGGGGTTGAGCTAAGGTAAGCTAAGCTAAGGTCAGTTGGTTCCTTTCCTTGGACTCCACTACTCAGATATATTCCTCTTCGTCTTCCTCCTGCTTCTGCCTGCCCTGACTGCGTGTGTGTGCAAGGGAATATATGGTGGTGGTGGTGGTGAGGAGGAGGGGGCCAGC
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| CDS seq | ATGTCGTCGCAGCAGCAGCAGCAGCACGCCGGTGAGGCCCCCGCCTCCGCCGCCGCCGCTGCCCGGGCGCGGCTCAGGTGGACCGGGCAGCTGCACGAGCGGTTCGTCCTCGCCGTGGCGGAGCTCGGCGGCGCGGACAGTAAGCCCCACCCCCGCGCCTTCTTGCTTCTTCTTCCTCCTCTGACATCATTGATCATGGGCATGGCTGATCGATCGGCTTTGTTTCTTGGCGCCATTGCAGGGGCGACGCCCAAGTCCGTGCTGAGGGCCATGGCCGTGCCGGGGCTCACCTTGTACCACCTCAAGAGCCACCTCCAGAAGTACCGGCAGGCGGTGAGCCGCGGCGGCAATGGAGGCGGCGGAGGCAGCGGCAGCCTGAACGACCGGTCATCCTCGTCGGAGCGCCAACCAGCCGACCACGACGGCGATAGCGCCGCCGATGAGCCGCGCACCATTGCTTACGACGGCGACAGCGATGGCGATGCTAAAGAAGCTCTCCGTGATTCATCCAGGAGCATGGTGCAGATGCAGAGGGAAGTCCAGAGGAAGCTCCAGGAGCAGATTGAGGTCAAGAGGCATCTGCAACTGAGGATGGAGGCACAGGGGAGGTACCTGCAGTCAGTGCTACGCAGGGCGCAGCAAGTCCTGGCCGACCATAGCCTGGCAAGCTCGCCGGAGGCCGCCACGACGGAGCTCTCGGAGCTCGCCTCCGCCGTGGACATCGAGTGCATGTCCTCCTCCTCCCCGCCACGGCACCACCGCCAATCCGCCGCAACCGACAGCTGCGTGACTACGACGTCGTCGTCGGAGGCCGAGAGCAAGGCCGCCGGGTCCAAGCGGCTCCACACCAGCGATTGCACCGTCGAGCAGCCGGTGCAGGGCAAGAGGACCTTCAACTTCCTGCAAAGGCACACCCAGGCAGATCAAGAAGAAGAACAAGAAGAAGAATATGCAGGAGCAGAGGATGGAAGCTCATCAGAGATTGATCTGAACAGGTAG
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| Protein seq | MSSQQQQQHAGEAPASAAAAARARLRWTGQLHERFVLAVAELGGADSKPHPRAFLLLLPPLTSLIMGMADRSALFLGAIAGATPKSVLRAMAVPGLTLYHLKSHLQKYRQAVSRGGNGGGGGSGSLNDRSSSSERQPADHDGDSAADEPRTIAYDGDSDGDAKEALRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQVLADHSLASSPEAATTELSELASAVDIECMSSSSPPRHHRQSAATDSCVTTTSSSEAESKAAGSKRLHTSDCTVEQPVQGKRTFNFLQRHTQADQEEEQEEEYAGAEDGSSSEIDLNR |
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| Function | Myb-related protein 2 [UniProtKB/Swiss-Prot:Q9SQQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0335600 | OsMH63_08T0335600.1 | Chr08 | 22871822 | 22873983 | - | maker | ||
| CDS seq | ATGTCGTCGCAGCAGCAGCAGCAGCACGCCGGTGAGGCCCCCGCCTCCGCCGCCGCCGCTGCCCGGGCGCGGCTCAGGTGGACCGGGCAGCTGCACGAGCGGTTCGTCCTCGCCGTGGCGGAGCTCGGCGGCGCGGACAGTAAGCCCCACCCCCGCGCCTTCTTGCTTCTTCTTCCTCCTCTGACATCATTGATCATGGGCATGGCTGATCGATCGGCTTTGTTTCTTGGCGCCATTGCAGGGGCGACGCCCAAGTCCGTGCTGAGGGCCATGGCCGTGCCGGGGCTCACCTTGTACCACCTCAAGAGCCACCTCCAGAAGTACCGGCAGGCGGTGAGCCGCGGCGGCAATGGAGGCGGCGGAGGCAGCGGCAGCCTGAACGACCGGTCATCCTCGTCGGAGCGCCAACCAGCCGACCACGACGGCGATAGCGCCGCCGATGAGCCGCGCACCATTGCTTACGACGGCGACAGCGATGGCGATGCTAAAGAAGCTCTCCGTGATTCATCCAGGAGCATGGTGCAGATGCAGAGGGAAGTCCAGAGGAAGCTCCAGGAGCAGATTGAGGTCAAGAGGCATCTGCAACTGAGGATGGAGGCACAGGGGAGGTACCTGCAGTCAGTGCTACGCAGGGCGCAGCAAGTCCTGGCCGACCATAGCCTGGCAAGCTCGCCGGAGGCCGCCACGACGGAGCTCTCGGAGCTCGCCTCCGCCGTGGACATCGAGTGCATGTCCTCCTCCTCCCCGCCACGGCACCACCGCCAATCCGCCGCAACCGACAGCTGCGTGACTACGACGTCGTCGTCGGAGGCCGAGAGCAAGGCCGCCGGGTCCAAGCGGCTCCACACCAGCGATTGCACCGTCGAGCAGCCGGTGCAGGGCAAGAGGACCTTCAACTTCCTGCAAAGGCACACCCAGGCAGATCAAGAAGAAGAACAAGAAGAAGAATATGCAGGAGCAGAGGATGGAAGCTCATCAGAGATTGATCTGAACAGGTAG
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| Protein seq | MSSQQQQQHAGEAPASAAAAARARLRWTGQLHERFVLAVAELGGADSKPHPRAFLLLLPPLTSLIMGMADRSALFLGAIAGATPKSVLRAMAVPGLTLYHLKSHLQKYRQAVSRGGNGGGGGSGSLNDRSSSSERQPADHDGDSAADEPRTIAYDGDSDGDAKEALRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQVLADHSLASSPEAATTELSELASAVDIECMSSSSPPRHHRQSAATDSCVTTTSSSEAESKAAGSKRLHTSDCTVEQPVQGKRTFNFLQRHTQADQEEEQEEEYAGAEDGSSSEIDLNR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0335600 | OsMH63_08T0335600.2 | Chr08 | 22871822 | 22873981 | - | maker | ||
| CDS seq | ATGTCGTCGCAGCAGCAGCAGCAGCACGCCGGGGCGACGCCCAAGTCCGTGCTGAGGGCCATGGCCGTGCCGGGGCTCACCTTGTACCACCTCAAGAGCCACCTCCAGAAGTACCGGCAGGCGGTGAGCCGCGGCGGCAATGGAGGCGGCGGAGGCAGCGGCAGCCTGAACGACCGGTCATCCTCGTCGGAGCGCCAACCAGCCGACCACGACGGCGATAGCGCCGCCGATGAGCCGCGCACCATTGCTTACGACGGCGACAGCGATGGCGATGCTAAAGAAGCTCTCCGTGATTCATCCAGGAGCATGGTGCAGATGCAGAGGGAAGTCCAGAGGAAGCTCCAGGAGCAGATTGAGGTCAAGAGGCATCTGCAACTGAGGATGGAGGCACAGGGGAGGTACCTGCAGTCAGTGCTACGCAGGGCGCAGCAAGTCCTGGCCGACCATAGCCTGGCAAGCTCGCCGGAGGCCGCCACGACGGAGCTCTCGGAGCTCGCCTCCGCCGTGGACATCGAGTGCATGTCCTCCTCCTCCCCGCCACGGCACCACCGCCAATCCGCCGCAACCGACAGCTGCGTGACTACGACGTCGTCGTCGGAGGCCGAGAGCAAGGCCGCCGGGTCCAAGCGGCTCCACACCAGCGATTGCACCGTCGAGCAGCCGGTGCAGGGCAAGAGGACCTTCAACTTCCTGCAAAGGCACACCCAGGCAGATCAAGAAGAAGAACAAGAAGAAGAATATGCAGGAGCAGAGGATGGAAGCTCATCAGAGATTGATCTGAACAGGTAG
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| Protein seq | MSSQQQQQHAGATPKSVLRAMAVPGLTLYHLKSHLQKYRQAVSRGGNGGGGGSGSLNDRSSSSERQPADHDGDSAADEPRTIAYDGDSDGDAKEALRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQVLADHSLASSPEAATTELSELASAVDIECMSSSSPPRHHRQSAATDSCVTTTSSSEAESKAAGSKRLHTSDCTVEQPVQGKRTFNFLQRHTQADQEEEQEEEYAGAEDGSSSEIDLNR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.1419055 | 43.424112 | 3.724929 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0434700 | RBH | 1.176749 | 1.186881 | 2.165639 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g33750 | RBH | 0.780526 | 0.782976 | 0.546792 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0434700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0017190 | RBH | 0.104497 | 19.788532 | 3.137330 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0017070 | RBH | 0.247440 | 5.299890 | 0.430332 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0017020 | RBH | 0.650489 | 15.096055 | 2.482711 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0017330 | RBH | 0.144992 | 0.256520 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0017180 | RBH | 3.870956 | 39.641968 | 6.244569 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0017070 | RBH | 0.092872 | 0.878063 | 0.474092 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0349300 | SBH | 3.952112 | 0.511476 | 13.1284935 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0016440 | RBH | 0.091138 | 0.755785 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0016710 | RBH | 0.291530 | 27.244211 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0016520 | RBH | 3.867252 | 53.616112 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0017340 | RBH | 0.000000 | 1.602281 | 1.329592 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0016740 | RBH | 0.064728 | 8.723566 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G016900 | RBH | 0.0 | 2.521875 | 1.911407 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0017000 | RBH | 0.783367 | 29.865376 | 7.300975 |
| Os XI: R9311 | R9311 | AGIS | R9311C08g29693 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_08g0208800 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_08g0219600 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_08g0197100 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_08g0212800 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0814501200.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0828666000.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0825628600.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0827591000.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0819159400.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0822713600.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0823510200.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0818089000.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0815446200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0813819000.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0819372400.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0827388800.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0818852800.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0823332200.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0816586800.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0814596000.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0815212600.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0822485200.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0816154400.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0817702200.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0834497800.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0821969700.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0818694600.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0813879800.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0819438600.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0819633300.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0824002400.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0820743400.01 | RBH | None | None | None |
