Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0188500 | OGI:08034690 | 22/50 | Minghui 63 | MH63RS3 | HZAU | Chr08:12771252-12772760 | ||||||||
| Gene Symbol | OsCTZFP8,CTZFP8 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_INS0824360,Lemont_MH63RS3_INS0825160,127652_MH63RS3_INV0821380,ZH11_MH63RS3_INS0823940,DHX2_MH63RS3_OTH0820860_3,KY131_MH63RS3_INS0823030,125619_MH63RS3_INV0822640,Kosh_MH63RS3_INS0823760,Nipponbare_MH63RS3_INS0822470,LJ_MH63RS3_OTH0819370,
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| DNA seq | ATGATCAGAGAAAACCGAGGTCAATGATATGTGGGGCCCACATGTCATAGGAAGGAAGAGATTGATCCGTCGCGAACCTGGTTCAGAAGGTCCCTCAACTTGTTATCGAGTTACAAAATCGTCCCCCAACCAGAAAACCAGATACAGAGTATCCTCCAACTTAAAAAACATTCATTTTAGGTCCTTTTGTGGTTTTGAACCCGGTTTCATCATACGTGGCGGCTGAGTCAGCGTGGAACCCACGTAGGTCCCACCTGTCAGCGTGGCCACGTCAGCACCCTCTCTCTCTTCCCCCTCCTCTCCCTTCCTCCTCTCTCTCTCTCACTCTTCTCGGCAAGCCGGCCGGTGGCTGGGGCGAAGGCCGCCAGGGTGAGGCGGCGGCGGCAGGTCGCGAATGGCGAGACGGAAGCGCTCCACGCCGCGGTGCTCAAGGAGGAGGAGCAGCAGCACGAGGTGGAGGAGGCGGCGGTCGTGACGAGCAGCAGCGCCACAAGCGGGGAGGAGGGCGGGCACCTACCGCAGGGGTGGGCGAAGCGGAAGAGGTCGCGCCGCCAGCGATCGGAGGAGGAGAACCTCGCGCTCTGCCTTCTCATGCTCGCCCTCGGCGGCCACCACCGCGTCCAGGCGCCGCCTCCTCTCTCGGCGCCGGTAGGTGCGGAGTTCAAGTGCTCCGTCTGCGGCAGGTCCTTCAGCTCCTACCAGGCGCTCGGCGGCCACAAGACGAGCCACCGGTTCAAGCTGCCGACTCCGCCCGCATCTCCCGTCTTGGCTCCTGCCTCCTCCGAGGTCCAGAGCCCCCTCGCCTTCTCACCGCGTAATTCAGCAGCTGCACGGATCTGATCTCTCAAAGAGTTTTTGGTCTAGGGAGTGAAATTCACGGTCGAAACAAACTATTCGTTGATTCGTTTTGTGCCGCTATTGTTTAATTTGTTCCTGCTTTTGTACATAGCAAACGAGTGATACATAGCCATACATAGTCATACAGATACTATGTCTAGCTCTTCCTTGGTTCTTTGTACACTGGAACTGTACCTGTATCTTTTACACTTAGTTTTTTGGCGGTCATATATTGTAGACCATATTCGATCATATTGGGAGATTGATTCGTGTACAGTACGCTGTAACATAAACACAGATTGATTTCATGATCATATTTGTACAGAACCGAAACATCTTGTTTTGGCACCTCAGTCTCCTTTGCTTACAGACACGGTAAGAAAACAGAAGCCTCTAGTTGATCAATTTACATATTGCGGCTCTGCCTCCTCATGCTAGCCCGCGGCGGCCACCACCGTGTCCAGGCGCCGCCTCCGCTCTCGGCGTTGGTGCGGCCGTCGGCAGGTGCGGAGTTCAAGTGCTCCGTCTGCGGCAAGCCTATCAGGCGCTTGGCGGCCACAAGACGAGCCACCGGGTCAAGCTGCCGACTCCGCCCGCAGCTCCGGCAACGGCCACTCCGCCGCCCGGGCGTTCGACCTCAACCTCCCGGCCGGCGCCATTCGCGACCGGTGA
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| CDS seq | ATGATCAGAGAAAACCGAGGTCCCACCTGTCAGCGTGGCCACGTCAGCACCCTCTCTCTCTTCCCCCTCCTCTCCCTTCCTCCTCTCTCTCTCTCACTCTTCTCGGCAAGCCGGCCGGTGGCTGGGGCGAAGGCCGCCAGGGTGAGGCGGCGGCGGCAGGTCGCGAATGGCGAGACGGAAGCGCTCCACGCCGCGGTGCTCAAGGAGGAGGAGCAGCAGCACGAGGTGGAGGAGGCGGCGGTCGTGACGAGCAGCAGCGCCACAAGCGGGGAGGAGGGCGGGCACCTACCGCAGGGGTGGGCGAAGCGGAAGAGGTCGCGCCGCCAGCGATCGGAGGAGGAGAACCTCGCGCTCTGCCTTCTCATGCTCGCCCTCGGCGGCCACCACCGCGTCCAGGCGCCGCCTCCTCTCTCGGCGCCGGTAGGTGCGGAGTTCAAGTGCTCCGTCTGCGGCAGGTCCTTCAGCTCCTACCAGGCGCTCGGCGGCCACAAGACGAGCCACCGGTTCAAGCTGCCGACTCCGCCCGCATCTCCCGTCTTGGCTCCTGCCTCCTCCGAGGTCCAGAGCCCCCTCGCCTTCTCACCGCCCCGCGGCGGCCACCACCGTGTCCAGGCGCCGCCTCCGCTCTCGGCGTTGGTGCGGCCGTCGGCAGGCGCTTGGCGGCCACAAGACGAGCCACCGGGTCAAGCTGCCGACTCCGCCCGCAGCTCCGGCAACGGCCACTCCGCCGCCCGGGCGTTCGACCTCAACCTCCCGGCCGGCGCCATTCGCGACCGGTGA
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| Protein seq | MIRENRGPTCQRGHVSTLSLFPLLSLPPLSLSLFSASRPVAGAKAARVRRRRQVANGETEALHAAVLKEEEQQHEVEEAAVVTSSSATSGEEGGHLPQGWAKRKRSRRQRSEEENLALCLLMLALGGHHRVQAPPPLSAPVGAEFKCSVCGRSFSSYQALGGHKTSHRFKLPTPPASPVLAPASSEVQSPLAFSPPRGGHHRVQAPPPLSALVRPSAGAWRPQDEPPGQAADSARSSGNGHSAARAFDLNLPAGAIRDR |
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| Function | Zinc finger protein 1 [UniProtKB/Swiss-Prot:Q42430] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0188500 | OsMH63_08T0188500.1 | Chr08 | 12771252 | 12772760 | + | maker | ||
| CDS seq | ATGATCAGAGAAAACCGAGGTCCCACCTGTCAGCGTGGCCACGTCAGCACCCTCTCTCTCTTCCCCCTCCTCTCCCTTCCTCCTCTCTCTCTCTCACTCTTCTCGGCAAGCCGGCCGGTGGCTGGGGCGAAGGCCGCCAGGGTGAGGCGGCGGCGGCAGGTCGCGAATGGCGAGACGGAAGCGCTCCACGCCGCGGTGCTCAAGGAGGAGGAGCAGCAGCACGAGGTGGAGGAGGCGGCGGTCGTGACGAGCAGCAGCGCCACAAGCGGGGAGGAGGGCGGGCACCTACCGCAGGGGTGGGCGAAGCGGAAGAGGTCGCGCCGCCAGCGATCGGAGGAGGAGAACCTCGCGCTCTGCCTTCTCATGCTCGCCCTCGGCGGCCACCACCGCGTCCAGGCGCCGCCTCCTCTCTCGGCGCCGGTAGGTGCGGAGTTCAAGTGCTCCGTCTGCGGCAGGTCCTTCAGCTCCTACCAGGCGCTCGGCGGCCACAAGACGAGCCACCGGTTCAAGCTGCCGACTCCGCCCGCATCTCCCGTCTTGGCTCCTGCCTCCTCCGAGGTCCAGAGCCCCCTCGCCTTCTCACCGCCCCGCGGCGGCCACCACCGTGTCCAGGCGCCGCCTCCGCTCTCGGCGTTGGTGCGGCCGTCGGCAGGCGCTTGGCGGCCACAAGACGAGCCACCGGGTCAAGCTGCCGACTCCGCCCGCAGCTCCGGCAACGGCCACTCCGCCGCCCGGGCGTTCGACCTCAACCTCCCGGCCGGCGCCATTCGCGACCGGTGA
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| Protein seq | MIRENRGPTCQRGHVSTLSLFPLLSLPPLSLSLFSASRPVAGAKAARVRRRRQVANGETEALHAAVLKEEEQQHEVEEAAVVTSSSATSGEEGGHLPQGWAKRKRSRRQRSEEENLALCLLMLALGGHHRVQAPPPLSAPVGAEFKCSVCGRSFSSYQALGGHKTSHRFKLPTPPASPVLAPASSEVQSPLAFSPPRGGHHRVQAPPPLSALVRPSAGAWRPQDEPPGQAADSARSSGNGHSAARAFDLNLPAGAIRDR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.1559495 | 1.0685605 | 0.0992715 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0300366 | RBH | 0.0 | 0.0 | 1.008309 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g20580 | RBH | 0.292572 | 0.0 | 0.227565 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0300366 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0010600 | RBH | 0.385285 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0010790 | RBH | 0.000000 | 7.010882 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0010640 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0010610 | RBH | 0.0 | 3.201615 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0010640 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0192300 | RBH | 0.2514665 | 0.8448855 | 0.204634 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0010360 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0010220 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0010990 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0010170 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G010460 | RBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0010310 | RBH | 0.0 | 0.0 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C08g29063 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_08g0128600 | SBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_08g0141000 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_08g0122400 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_08g0131200 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | NA | NA | NA | NA | NA |
| Os cB: Basmati1 | Basmati1 | SICAU | NA | NA | NA | NA | NA |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0826797700.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: DHX2 | DHX2 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0822714500.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: G46 | G46 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: G630 | G630 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: G8 | G8 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: II32 | II32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: J4155 | J4155 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: Kosh | Kosh | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-trp: Lemont | Lemont | SICAU | NA | NA | NA | NA | NA |
| Os GJ-adm: LJ | LJ | SICAU | NA | NA | NA | NA | NA |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0815705700.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | NA | NA | NA | NA | NA |
| Os XI-2: TM | TM | SICAU | NA | NA | NA | NA | NA |
| Os XI-3: Tumba | Tumba | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: WSSM | WSSM | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y3551 | Y3551 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y58S | Y58S | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: YX1 | YX1 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: ZH11 | ZH11 | SICAU | NA | NA | NA | NA | NA |
