Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0022500 | OGI:08003880 | 49/50 | Minghui 63 | MH63RS3 | HZAU | Chr08:1516464-1520423 | ||||||||
| Gene Symbol | OsC3H54,C3H54 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | |||||||||||
| DNA seq | CAGATCGCCGTTTTCCCCTATCAACAAATATATCATGCAAATGACAAAAAATCGGCCGACGTACTCCACTCCATCTCATCAAACCTCTCCGCCTTCTTCTCTCTCGCTCGCACGCACGCAGTCGCGCGCCCCGTTTGAACTGGGCCAAGGCGACGACTAGGCTTCGATCGGCGAGCGAGCCCTCCGCTCGATCCCCCCGCATGCGATGCGATGCGATCGATGCGCGCGCGATACTATCCACCCGATCGAATCGCGCGCTCTCGATCGATCTCGAATTTTATTCCTCCTTTGTTGTTATAAAAGGAGGCCCAGGTTTGTTCTTCGTGTTCCTCCTGTTTCAATTCCATTCTTCCATTGCGGGCGTCTAGTGATCGATCGAGGTAGGCTAGGTTTAGGTTTCATGTCCACCAGTGGTGGTGGTGGGTGGCAATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAGGGTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGAGGACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGATACTAAGGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACCTCCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCAGCTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGCCGCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTCGCCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAATTCGCGCCTCCCGGGCTCGTCATCGACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAACAACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGGTGGCGGCGGTGGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCCCTGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCACCAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCAGCCGGGCGGCGTGACACCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCTCAACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAAGTACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGCCGGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGTAATGCCAAAATAATCTTCCATTTCTTCTCTATCAATCTTGTTGATTGTTTCTTCTCAATTTGATTGATTGATTGATTTACTGTCTGACGAACAGGCCGCACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGGTGGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATACCTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGTCTGCAATTCGGCATGTATAAACCGCAACTTGTTTGCTTCTTTCCAAATCTTAAATGACATGGCCATTTTCGCTTGTTTGATTGCGTTTGACAGGCAGTACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGTCAGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCATCTGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGTAACCATTACCCTTCTTGGTTCTTGCCAACAGATAGTTCAATTCACAGTAGAGTTTTCAAATGATTAAAAATGGTGTTTCCCATGGACTTGTTAGTACTTCTAGCTGTTACTACTTTTTTGTGTTTGTGACGAGCAAATTAAATTAATTAAAGTTTTTATAAATATTGCAATTTTCACGTGCAGGACGTGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGATCAAGAGCTCTACACAGGTATAATAGCATTTGCATGCACACATCATCACAATGGGCACCGATTAATTCTCAACCTTCATCTTGCTTCAATTTTGTGCAACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGAGAAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATCCATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTCCCTCCAGGATGGTCTGTGTGTTGTGTCATTCATTTGTCATTGCCAGAATTATACCTCTAGTTGTTCCATTTCTCCCTGGTTGAAGTTTGTTTAGTGGCTCACGGATTATCTACTACTTGATTATAGTGATAAATTAAATATTTTAAGTAATGAACTTAACGATTAGGTTAATAAGTGCAGTAGAAGAACGGTGTTTCTTACCAAAACATATTTTTTGAAGCGTGGAGATAATATGTTTTAATAGTATAGTGAATAAGCTGAATAGTGCACGGCCAAATATCCTGATGGTTTTGTGCGGCGTTTTTTTTCCTGTGAACAGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCCACTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGACCATGAGAGGTACAAACATATTTGCAGTCAATTTCTTGCATATACCCACAATCATATAGGTTGCTACCTGACATTGAGCTAGTTCCTCTTTGTTCATTGGATTGCTTCGTTTGATTTCTAACTGCAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGCTGGAAACAGCATATCCACAATCATATAGGAGGAAAAAAATTACAAAGAGACTTTTGGGCCTTGGGTTCGGAATTCAGGTGCCCTTTTAGGCATTTGATGGTAATTTGGTCCAAGAGTAACATAAGTATACACACACAGGAGGAGACAGCAAAAAGCAACAATATTTTTGTTGTAGATAGAGAAGGAAGGCAGAAGAAAATCTCACTGGTCATAATTAGGCGGCACATCTTTTTCGAAAAAAAATAATTAGGAGGCACATAAACACATGGTGTTCATTTTATACTTTAGAAGAGGACAGAAACAACAGCTTACAAAAGAATCTCACATGGTGCAGTAGCTAGCTTGCAAGAGGTAAGGACAGTTACAAAAGAATTACAATGGTGGAAACTTGAGATATAGATGTGCAGTTTGACTATAATTAAGGAATAGGGGACAATGTGATATGCTAATTATACTGTCCTACAATAAGGCGTGTTATTATTTACATATTTAGTGTTATCTTCTTTTTTTTAGGGTATAATGGCCTACTGGCCTTTACATTTACAAGGGTGAAAAAAAAAAGCAGAACCTTTGCTGATATTCCTATTGACAAGATGAGCAGAGCGTGCTCATTTGTACTTCGCATCAGTAATGGAGAAAATTGGCTTCGATGTTTATTTCCTGCTTTCTGTAAATTATTTGTCTTGTTTTGAGTGCATCATTAGATCGCATTTTCACCAAACCAAGTACTCCCCCACGGTGCATCAGATTTTGCTACGATTCTTGGGTTTTTTCGGGTTGATAGTGGAAAAGTCAACAGATAAGTCACCCTTCGCTTAATTTCTAAGATTCGCTTGCATAACTATGGC
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| CDS seq | ATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAGGGTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGAGGACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGATACTAAGGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACCTCCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCAGCTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGCCGCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTCGCCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAATTCGCGCCTCCCGGGCTCGTCATCGACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAACAACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGGTGGCGGCGGTGGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCCCTGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCACCAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCAGCCGGGCGGCGTGACACCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCTCAACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAAGTACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGCCGGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGCCGCACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGGTGGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATACCTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGCAGTACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGTCAGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCATCTGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGACGTGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGATCAAGAGCTCTACACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGAGAAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATCCATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTCCCTCCAGGATGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCCACTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGACCATGAGAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGCTGGAAACAGCATATCCACAATCATATAG
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| Protein seq | MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAALTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAAAAFGYQVQSPQYWPDSPPAPPTKAAQQEFAPPGLVIDASAEGPYPLRGGQHVLDDNNFGGGYYYPAGEDAFPNGGGGGGGGGGSPARARRSNGLSTRRPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVDNIKSMVPYCPPRFFEFDQELYTAEYDASRLMRKQLAEKREMLLEMERRRATVRRLESMPPQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPDPLEIVSNSQAPPTQAGNIYDDHESNQIELLPESPFAASAPAGNSISTII |
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| Function | Zinc finger CCCH domain-containing protein 54 [UniProtKB/Swiss-Prot:Q6ZK57] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0022500 | OsMH63_08T0022500-mRNA-1 | Chr08 | 1516464 | 1520423 | + | maker | ||
| CDS seq | ATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAGGGTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGAGGACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGATACTAAGGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACCTCCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCAGCTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGCCGCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTCGCCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAATTCGCGCCTCCCGGGCTCGTCATCGACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAACAACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGGTGGCGGCGGTGGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCCCTGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCACCAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCAGCCGGGCGGCGTGACACCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCTCAACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAAGTACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGCCGGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGCCGCACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGGTGGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATACCTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGCAGTACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGTCAGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCATCTGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGACGTGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGATCAAGAGCTCTACACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGAGAAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATCCATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTCCCTCCAGGATGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCCACTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGACCATGAGAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGCTGGAAACAGCATATCCACAATCATATAG
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| Protein seq | MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAALTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAAAAFGYQVQSPQYWPDSPPAPPTKAAQQEFAPPGLVIDASAEGPYPLRGGQHVLDDNNFGGGYYYPAGEDAFPNGGGGGGGGGGSPARARRSNGLSTRRPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVDNIKSMVPYCPPRFFEFDQELYTAEYDASRLMRKQLAEKREMLLEMERRRATVRRLESMPPQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPDPLEIVSNSQAPPTQAGNIYDDHESNQIELLPESPFAASAPAGNSISTII
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0022500 | OsMH63_08T0022500-mRNA-2 | Chr08 | 1516464 | 1520423 | + | maker | ||
| CDS seq | ATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAGGGTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGAGGACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGATACTAAGGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACCTCCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCAGCTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGCCGCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTCGCCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAATTCGCGCCTCCCGGGCTCGTCATCGACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAACAACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGGTGGCGGCGGTGGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCCCTGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCACCAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCAGCCGGGCGGCGTGACACCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCTCAACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAAGTACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGCCGGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGCCGCACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGGTGGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATACCTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGCAGTACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGTCAGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCATCTGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGACGTGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGATCAAGAGCTCTACACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGAGAAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATCCATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTCCCTCCAGGATGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCCACTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGACCATGAGAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGCTGGAAACAGCATATCCACAATCATATAG
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| Protein seq | MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAALTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAAAAFGYQVQSPQYWPDSPPAPPTKAAQQEFAPPGLVIDASAEGPYPLRGGQHVLDDNNFGGGYYYPAGEDAFPNGGGGGGGGGGSPARARRSNGLSTRRPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVDNIKSMVPYCPPRFFEFDQELYTAEYDASRLMRKQLAEKREMLLEMERRRATVRRLESMPPQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPDPLEIVSNSQAPPTQAGNIYDDHESNQIELLPESPFAASAPAGNSISTII
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 41.4711515 | 2.133016 | 0.329797 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0126700 | RBH | 2.112302 | 1.550933 | 1.238468 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g03310 | RBH | 1.539100 | 0.933668 | 0.269485 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0126700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0001820 | RBH | 5.155721 | 0.963683 | 6.952759 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0001830 | RBH | 0.855074 | 0.000000 | 2.659986 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0001860 | RBH | 11.075414 | 0.0 | 4.109533 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0001820 | RBH | 3.122030 | 0.021272 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0001680 | RBH | 28.205166 | 0.0 | 24.346884 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0001570 | RBH | 8.685742 | 0.000000 | 0.672687 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0024200 | RBH | 28.2027335 | 1.153771 | 1.326367 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0001760 | RBH | 0.349986 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0001740 | RBH | 1.160684 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0001660 | RBH | 51.428249 | 3.087374 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0001750 | RBH | 10.798762 | 0.0 | 2.120465 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0001680 | RBH | 4.516765 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G001790 | RBH | 6.831315 | 0.0 | 1.666963 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0001660 | RBH | 26.865145 | 1.385086 | 8.038581 |
| Os XI: R9311 | R9311 | AGIS | R9311C08g28084 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_08g0018300 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_08g0018400 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_08g0018100 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_08g0018900 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0812979100.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0826681700.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0823833500.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0825807700.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0817410700.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0820580500.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0821685900.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0816917500.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0814305100.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0812848100.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0817494700.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0825545300.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0817875300.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0820952300.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0816142500.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0813018300.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0813056900.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0820233900.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0815103300.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0816246700.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0832593300.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0823811200.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0816812300.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0812895900.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0818447900.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0821445400.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0823662500.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0818329300.01 | RBH | None | None | None |
