Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0427900 | OGI:06076910 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr06:28167790-28169249 | ||||||||
| Gene Symbol | RISBZ5,OsbZIP52,bZIP52 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | TTAAGGCCACACATCAGCCGAGCAGCTGGTCACCTCGCTGGATATCCGGTTGTCCAGGCTCTCTAGGCTTGCAGCGCTTTGAACCGGTGAGTTCTGAACCTGTCGACCCAGGTTCAAGCCTTTGAAACCACAGGCATCGTTCCGTGGTAAACTGAGCATATCCAAAGCTTGGCACATCTTCCTGGAGCTGAGCAATGGCGCCAGCCCGAGCTGGCCCAGGCCACACGACATCGCGGCCCTCGCGACCATGTCTTCAGCCATCTTGACCTGGGATCGAAGCCAAGAATTGGTAAGTTTGGAGAGATGCCGGAAGCCGATCATCGGAAACAATTAACTATTTACCACTCTTACGAGTGACAATTTGCAATTGGACTCACATGTCATAGACACATAAAGTGATAAAGACCGATATGTTGTCATAGACTATGGGTGGTAAATTCTTAATTACCGCATCTTAAAAGTGGCGAAAAGTTAAATGCGCCGATAATTGGTGGCTGAAGGAGAGTTTGGTTTCTAATTACCTTGACTCTTAAGGCCTCTACATCCGATTTGAGGATCCTGTTGTCCGTGACCGCTGTATTGAACTGCTGGCTGGACTCTGTGAGCTGCTTGAAGAGGGATGAGTTTTCGCCTTTGAGTTGCTCGACCTGATCATAGATGGATTGCTGTAAGATCACACTGATATTTGCATCAACGCATCTGGAAATTTGAACTTTGAAGTTTATAATACCTGTGATTCGAGTTCAGATAACTGTGCCTGCTTTCTCCTCCTGGATCGTCGAGCGGACTCCCTGTTGGACACCATCCTGAAATTCGAACAAGCAGTTCATAAGAATGCGTTCTCTGTTCAAATTTGTTGCATTTGCTAGAAATCAAGATTGATCGATCACTATGTACCTTCTTATTCGCTTTGTTTCTGTGGATTTCGTGCCACGCAGGCGTGGACTCCTCTCTGCTTCTAACAGCGAATCGCAATCGGAGTCCGAGTCGCTTTCAGGCGCGTGGTTCGCTGAGGTGGTTGGTTTGGGGTCATCTGCAACCAAAATGAACCCAACATGTGATGAATTTGACTAAATTTGGGTGTGTTTCATAACTCCAAATAAACGCATAGAAAATGGGCTGTTTGTACAATAGCTCTGTAACTCAAAAAAACTCAAATTATGTCATGTGTACCTACCGGAGATGGACGCCGGCGTCCGCTCGTCGGCCGTGGCCGAGAAGGCGGCGGCGGCGCGCGGCGGCGTACGGACGCTCTCCGGCCACCACAGCTGGTGGCCGCCGCCGCTTCCGTCCAGTGTACTCTGATCCAACACGGACATCTCGCCGTCGCCGGGAGAGAACACGCCGGACTTACGCGCGCCGTCGCCGGGAGATAACACGCCGGGCTTGCGGTCGCCGGCGCCGGCCTCCTCCCGGATGAACGCCTCCAGCTGCAGCTCCGACGGGCACTTCTTCATCAT
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| CDS seq | ATGATGAAGAAGTGCCCGTCGGAGCTGCAGCTGGAGGCGTTCATCCGGGAGGAGGCCGGCGCCGGCGACCGCAAGCCCGGCGTGTTATCTCCCGGCGACGGCGCGCGTAAGTCCGGCGTGTTCTCTCCCGGCGACGGCGAGATGTCCGTGTTGGATCAGAGTACACTGGACGGAAGCGGCGGCGGCCACCAGCTGTGGTGGCCGGAGAGCGTCCGTACGCCGCCGCGCGCCGCCGCCGCCTTCTCGGCCACGGCCGACGAGCGGACGCCGGCGTCCATCTCCGATGACCCCAAACCAACCACCTCAGCGAACCACGCGCCTGAAAGCGACTCGGACTCCGATTGCGATTCGCTGTTAGAAGCAGAGAGGAGTCCACGCCTGCGTGGCACGAAATCCACAGAAACAAAGCGAATAAGAAGGATGGTGTCCAACAGGGAGTCCGCTCGACGATCCAGGAGGAGAAAGCAGGCACAGTTATCTGAACTCGAATCACAGGTCGAGCAACTCAAAGGCGAAAACTCATCCCTCTTCAAGCAGCTCACAGAGTCCAGCCAGCAGTTCAATACAGCGGTCACGGACAACAGGATCCTCAAATCGGATGTAGAGGCCTTAAGAGTCAAGGTCAAGATGGCTGAAGACATGGTCGCGAGGGCCGCGATGTCGTGTGGCCTGGGCCAGCTCGGGCTGGCGCCATTGCTCAGCTCCAGGAAGATGTGCCAAGCTTTGGATATGCTCAGTTTACCACGGAACGATGCCTGTGGTTTCAAAGGCTTGAACCTGGGTCGACAGGTTCAGAACTCACCGGTTCAAAGCGCTGCAAGCCTAGAGAGCCTGGACAACCGGATATCCAGCGAGGTGACCAGCTGCTCGGCTGATGTGTGGCCTTAA
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| Protein seq | MMKKCPSELQLEAFIREEAGAGDRKPGVLSPGDGARKSGVFSPGDGEMSVLDQSTLDGSGGGHQLWWPESVRTPPRAAAAFSATADERTPASISDDPKPTTSANHAPESDSDSDCDSLLEAERSPRLRGTKSTETKRIRRMVSNRESARRSRRRKQAQLSELESQVEQLKGENSSLFKQLTESSQQFNTAVTDNRILKSDVEALRVKVKMAEDMVARAAMSCGLGQLGLAPLLSSRKMCQALDMLSLPRNDACGFKGLNLGRQVQNSPVQSAASLESLDNRISSEVTSCSADVWP |
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| Function | bZIP transcription factor RISBZ5 [UniProtKB/Swiss-Prot:Q654B3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0427900 | OsMH63_06T0427900.1 | Chr06 | 28167790 | 28169249 | - | maker | ||
| CDS seq | ATGATGAAGAAGTGCCCGTCGGAGCTGCAGCTGGAGGCGTTCATCCGGGAGGAGGCCGGCGCCGGCGACCGCAAGCCCGGCGTGTTATCTCCCGGCGACGGCGCGCGTAAGTCCGGCGTGTTCTCTCCCGGCGACGGCGAGATGTCCGTGTTGGATCAGAGTACACTGGACGGAAGCGGCGGCGGCCACCAGCTGTGGTGGCCGGAGAGCGTCCGTACGCCGCCGCGCGCCGCCGCCGCCTTCTCGGCCACGGCCGACGAGCGGACGCCGGCGTCCATCTCCGATGACCCCAAACCAACCACCTCAGCGAACCACGCGCCTGAAAGCGACTCGGACTCCGATTGCGATTCGCTGTTAGAAGCAGAGAGGAGTCCACGCCTGCGTGGCACGAAATCCACAGAAACAAAGCGAATAAGAAGGATGGTGTCCAACAGGGAGTCCGCTCGACGATCCAGGAGGAGAAAGCAGGCACAGTTATCTGAACTCGAATCACAGGTCGAGCAACTCAAAGGCGAAAACTCATCCCTCTTCAAGCAGCTCACAGAGTCCAGCCAGCAGTTCAATACAGCGGTCACGGACAACAGGATCCTCAAATCGGATGTAGAGGCCTTAAGAGTCAAGGTCAAGATGGCTGAAGACATGGTCGCGAGGGCCGCGATGTCGTGTGGCCTGGGCCAGCTCGGGCTGGCGCCATTGCTCAGCTCCAGGAAGATGTGCCAAGCTTTGGATATGCTCAGTTTACCACGGAACGATGCCTGTGGTTTCAAAGGCTTGAACCTGGGTCGACAGGTTCAGAACTCACCGGTTCAAAGCGCTGCAAGCCTAGAGAGCCTGGACAACCGGATATCCAGCGAGGTGACCAGCTGCTCGGCTGATGTGTGGCCTTAA
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| Protein seq | MMKKCPSELQLEAFIREEAGAGDRKPGVLSPGDGARKSGVFSPGDGEMSVLDQSTLDGSGGGHQLWWPESVRTPPRAAAAFSATADERTPASISDDPKPTTSANHAPESDSDSDCDSLLEAERSPRLRGTKSTETKRIRRMVSNRESARRSRRRKQAQLSELESQVEQLKGENSSLFKQLTESSQQFNTAVTDNRILKSDVEALRVKVKMAEDMVARAAMSCGLGQLGLAPLLSSRKMCQALDMLSLPRNDACGFKGLNLGRQVQNSPVQSAASLESLDNRISSEVTSCSADVWP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.117811 | 47.8840065 | 0.3699265 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0662200 | RBH | 0.0 | 0.000000 | 2.770680 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g45140 | RBH | 0.0 | 0.000000 | 0.699083 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0662200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0025260 | RBH | 0.0 | 39.445961 | 2.806811 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0025070 | RBH | 0.000000 | 3.132651 | 0.692433 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0025240 | RBH | 0.248535 | 21.273031 | 4.252605 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0024830 | RBH | 0.045050 | 0.990334 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0025300 | RBH | 0.0 | 1.316144 | 4.162639 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0070300 | RBH | 3.88963 | 22.9544365 | 40.8850765 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0024800 | RBH | 0.069210 | 1.863851 | 1.029572 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0411100 | RBH | 24.58798 | 85.3410565 | 0.9120235 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0025210 | RBH | 0.0 | 0.672312 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0025220 | RBH | 0.130041 | 17.007204 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0024870 | RBH | 0.0 | 53.220638 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0025460 | RBH | 0.114346 | 7.244645 | 0.270882 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0025110 | RBH | 0.0 | 19.827431 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G024960 | RBH | 0.0 | 6.298362 | 0.454255 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0025070 | RBH | 0.350736 | 60.482521 | 0.512344 |
| Os XI: R9311 | R9311 | AGIS | R9311C06g24218 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_06g0292800 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_06g0310500 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_06g0284000 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_06g0297900 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0611013000.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0623481400.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_020705 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0620652200.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0622560800.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0614288200.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0616566800.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0618432600.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0614760400.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0612208200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0610957000.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0614272800.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0622375000.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0614614600.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0616918000.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0612309200.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0611017600.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0611017200.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0616485200.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0613112800.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0613775800.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0628410600.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0618159800.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0613635800.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0611026800.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0615331800.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0615798400.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0618838600.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0614356600.01 | RBH | None | None | None |
