Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0006600 | OGI:06001080 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr06:345527-346126 | ||||||||
| Gene Symbol | Bph29,BPH29 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | TCAAAGCTGCAAATCCAGCGCCGGCGAGGCATCGGCGCGGAGCTGGAGGTCCACGCCGAACAGCCGGAGGCACCGCCGGCCACACGCAGCCTCCTCCTCGTCGACGACAGGCCGCGACGGCGGCAGCTGCACCTTGATCAAGGCCGGTGGCACCAGCGACGAGGACGACACGGAGGCGGCGCGCTTCCGGCAGTCGATGAAGAGGCGGGCACCGGCGCGGCAGAAGGAGACGGTGTCGCCGGCGGCGAGGCGCTTGTCGCGGACGTAGCGGCTCCATCCCTTGGTGATGACGTAGCTCTGGCTGCTGCTCCAGTAGGAGTAGCGGAAGCGCCACGTGCTGTCGCCGCCCCGCGCGTCCTCGAAGCACAGCACGGTGCCCGCCGGGCTGGTCCTCGCCGCCGGCCCCAGCGGGAAGTACTTCTCGGCGTAGTGCTTCGGCACCACCAGCCTGTTCAGCTTCCCCACGTCGCTCGGCGTCACCACCTTCTCGAACATGTACTCCCGCCGCTCGCCGCCGCCACCGCCGCCGCCACCGCCATGGCCACCTCCTCCTCCTTGCAGCTGCAGGTTTCTACTCTCCCATGCAACAATGGTGGCCAT
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| CDS seq | MATIVAWESRNLQLQGGGGGHGGGGGGGGGERREYMFEKVVTPSDVGKLNRLVVPKHYAEKYFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSRYVRDKRLAAGDTVSFCRAGARLFIDCRKRAASVSSSSLVPPALIKVQLPPSRPVVDEEEAACGRRCLRLFGVDLQLRADASPALDLQL |
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| Protein seq | MATIVAWESRNLQLQGGGGGHGGGGGGGGGERREYMFEKVVTPSDVGKLNRLVVPKHYAEKYFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSRYVRDKRLAAGDTVSFCRAGARLFIDCRKRAASVSSSSLVPPALIKVQLPPSRPVVDEEEAACGRRCLRLFGVDLQLRADASPALDLQL |
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| Function | B3 domain-containing protein Os06g0107800 [UniProtKB/Swiss-Prot:Q5VS55] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0006600 | OsMH63_06T0006600.1 | Chr06 | 345527 | 346126 | - | maker | ||
| CDS seq | ATGGCCACCATTGTTGCATGGGAGAGTAGAAACCTGCAGCTGCAAGGAGGAGGAGGTGGCCATGGCGGTGGCGGCGGCGGTGGCGGCGGCGAGCGGCGGGAGTACATGTTCGAGAAGGTGGTGACGCCGAGCGACGTGGGGAAGCTGAACAGGCTGGTGGTGCCGAAGCACTACGCCGAGAAGTACTTCCCGCTGGGGCCGGCGGCGAGGACCAGCCCGGCGGGCACCGTGCTGTGCTTCGAGGACGCGCGGGGCGGCGACAGCACGTGGCGCTTCCGCTACTCCTACTGGAGCAGCAGCCAGAGCTACGTCATCACCAAGGGATGGAGCCGCTACGTCCGCGACAAGCGCCTCGCCGCCGGCGACACCGTCTCCTTCTGCCGCGCCGGTGCCCGCCTCTTCATCGACTGCCGGAAGCGCGCCGCCTCCGTGTCGTCCTCGTCGCTGGTGCCACCGGCCTTGATCAAGGTGCAGCTGCCGCCGTCGCGGCCTGTCGTCGACGAGGAGGAGGCTGCGTGTGGCCGGCGGTGCCTCCGGCTGTTCGGCGTGGACCTCCAGCTCCGCGCCGATGCCTCGCCGGCGCTGGATTTGCAGCTTTGA
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| Protein seq | MATIVAWESRNLQLQGGGGGHGGGGGGGGGERREYMFEKVVTPSDVGKLNRLVVPKHYAEKYFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSRYVRDKRLAAGDTVSFCRAGARLFIDCRKRAASVSSSSLVPPALIKVQLPPSRPVVDEEEAACGRRCLRLFGVDLQLRADASPALDLQL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 17.111842 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0107800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g01860 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0107800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0000580 | RBH | 0.0 | 14.012362 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0000580 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0000560 | RBH | 0.0 | 6.479244 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0000560 | RBH | 0.0 | 0.286065 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0000540 | RBH | 0.0 | 2.995687 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0000510 | RBH | 0.0 | 1.111901 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0006900 | RBH | 0 | 14.560272 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0000540 | RBH | 0.000000 | 0.116611 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0000540 | RBH | 0.0 | 2.899266 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0000550 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0000540 | RBH | 0.0 | 0.229105 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0000510 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G000520 | RBH | 0.0 | 0.795440 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0000530 | RBH | 0.0 | 11.368582 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C06g21448 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_06g0005700 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_06g0005700 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_06g0005900 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_06g0005500 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0609560800.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0620885000.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_018002 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0618057200.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0620001800.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0611812800.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0613541600.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0615785400.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0613093800.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0610583400.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0609500200.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0612813600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0619835000.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0611911800.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0613701400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0611650600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0609569600.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0609582200.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0613472000.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0611485200.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0611836800.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0625825800.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0615567200.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0611152000.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0609572800.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0612783800.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0613094800.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0616433200.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0611542800.01 | RBH | None | None | None |
