Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_05G0371900 | OGI:05065080 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr05:25100298-25102863 | ||||||||
| Gene Symbol | OsDLN147,OsDLN147a,OsDLN147b,DLN147,DLN147b,DLN147a | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | ATCCGCGTGCTTTCCGTTGTATTCATATTGAGAGTGCCATAATTAATATGCTGTCTTCCGTTAGTTATCCTGTGGTACAACTCAACATTTGCAATAGCTTGTTCATACATCATTGAATTATTTATAACCTATGGTACAACTCTAGATAGCTACAATCTTTCCCGGCCTACATAATGTATTTACAGAATTAAAGTAGTTATAACTTTGGAAGAAATTATTTGTAAGCTCATTTCTTCTCCTTGATTGTATTACATATTGTCAGCTAATCAACTCCAGCTGAAGCCGTTCAAGTCAAAATGTCTATAACCTTGATCGTTATCATCTATATTGTGAGTATTTAGATCAAGATTCTTCCCTGAACTTTGTTGATCAAAATCTAGTAGCTTGCTTTCTCTTTGATAGTCAACTGTTTGTCTTTTGCAGCTTGGTTCATCAAGATATAGCTTCTCTACATTTATTTCTTTGCTTCCTGATGTTGAACTGGTTGTGCTGCCTCCGCCATTCTTTTGAGGCGTGATATACTCATGTAGAACCTCTGTATCACTGTCACTTCCCTCTGATTTGTGATACTGTTTACCACTATACAGATGACCCATTCTACGCTCACTTAAGCTTCTGTTAAGGGAATATTGAGATTCTTGATCTTGGGACTGTTTTCGGCAAAATAATGTACTATCATCATATGCTTTGAGTACCCCGTGGTTTTGTAGCCTATGCTCCTTGAATCCTTCAGCTGCAGTCAAACAGTTATTGGCTGAACTTTCAACAAACTGGATTTGCCTTGGCTCTAGTCTGTGTATACTTGAACTTTCTCTTATTTCTGTAACTGCGTTGCTGAGACATTCATTTGAAACTTGTGAGACCAGTTCTGATATTTTTATTTTTGCATCTTCCAGGCTTGCAGGGCCCAAGTTCTGCTTCCCAAGGGTCTCTTGAGCTTGCTCAAGAACTGCCTGCAGATACTTCCCTTGGGCTTCTATCCGCAGCTGTAGATGCCGTTGTACCTGATACCAAATTAGCTTCAGGTTAGAACCATTGAGCCAATTCATATTGTTGATACTATATGCATTATATTAATCTTAGCTGTTTTCTAAAAATAGTTTGCTGCCAAACTGGAGGAGAGTATCCAAGTTCTCTAATCTTTACATAATACTGTCTATTCTATTGTACAATGATTTGAGAATATAGTTAGAAAATAGTGTTATGAAAGGAATTTTTGGGGTAGATCTACCCGATCAATTACATATGTCCAATCTTATTCATAAAGATACTGGTACCGAATTCTAAAGGTTTGGCTGGATGTATTCTGAACATCGCTTAACTTTTACTAGAGGGAGAAAGTTATCTTGGGGGTCATTCCTGGTGGGAATCACTGTTGTGAAGGATACAAAAAAGATGATACAGCATTCATAGCAGTTTTCTTATGCTCTTAGTTGGTATGTGGGCATGCTGACTGGATGCTCGAATTTTTTTTTATCTTATGTCATGTCCATCTACTCTATGGGCCTATCGTGGGTTAAGATCTTATTATGCAAACAGGGTCAGTACCTCACCTCAAGTTGTTCATTTAGCTGCCTCTGCACCTCAATTTGCATCTGTAGTGCTTCACCGATTTGAATAGTTCTTGCACCCAATAAAAGGGACTATTACTTCACTATTCAGATGGATTATAATTATAAAGTACATGTGAAATTTCTTACTTCTCTGCCTGTGGAATGGCGCTTGCACTGGCCATCGCTAATGCACTTGTTCCAGGAATCCTATCAGCAACACCTGTACATCCAAGGGCTGCAAATTGTCATCATCCATGAGTTGCTATGTGGCTATTGTAGTGGTAACAATGGAAATTAAACTTGTTTTTACCATTCTTTGTTGTCCCAACATTAGCTTGACCTTGGAGATTCTTACTGAGCCTGTATTTCTGAAACATTCAAGAAATTATGAATTGCACTGAAATTTTTTAGTACTATTTTAAATGGGAGATTCCTGGTTGTCAGGTACCTGGAGATGGCTTTTCAGATGGTATAAGGTGAGTCCTGGAATGCCCATGAGCCTCATGACTGTTTTTGGAGTAGCTTCTGAGTGATTAAAATGAATGTTAGAACTCAGCTATTCTAGTGCATTGAGAAGATAAGAATCTTATACTTACTCTCTGCTCCACCTAATTGATTAACTGCATCTACAAATCGCTGATGCAACTCAGGTGTCCATTTCAACCTAGGTTTAGCGTCAGTTGAGAGAACCAGCCCAGAATCTCCTTGTGTATTTCCTCCATGCAGAAACAGATGCCGCTCCATTGGAAAGGATGTCCTAGTAGTGAAGAGGTCACTCCGACCCTGATGTTGGTGATACATCTACTGCAAAATTAATACACACTTTTAGAAGAATGGAAACATAAAGAGGCAAGCATTTACACTATCCTTTCTTACTTGTGTTATCCAGTCTGTTTCTTCTCTTTGCTATCACACGTCGAAACTGTTATGAGTGCTTCTCTTTTGGCAGTGCCAAAGCCAGCACTCTTCTCCAAGCCTAGGTCTATTGATACTCTTTTGGTCTTCTCAGGTTG
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| CDS seq | ATGTATCACCAACATCAGGGTCGGAGTGACCTCTTCACTACTAGGACATCCTTTCCAATGGAGCGGCATCTGTTTCTGCATGGAGGAAATACACAAGGAGATTCTGGGCTGGTTCTCTCAACTGACGCTAAACCTAGGTTGAAATGGACACCTGAGTTGCATCAGCGATTTGTAGATGCAGTTAATCAATTAGGTGGAGCAGAGAAAGCTACTCCAAAAACAGTCATGAGGCTCATGGGCATTCCAGGACTCACCTTATACCATCTGAAAAGCCATCTCCAGAAATACAGGCTCAGTAAGAATCTCCAAGGTCAAGCTAATGTTGGGACAACAAAGAATGCCCTTGGATGTACAGGTGTTGCTGATAGGATTCCTGGAACAAGTGCATTAGCGATGGCCAGTGCAAGCGCCATTCCACAGGCAGAGAAAACTATTCAAATCGGTGAAGCACTACAGATGCAAATTGAGGTGCAGAGGCAGCTAAATGAACAACTTGAGGTACAACGGCATCTACAGCTGCGGATAGAAGCCCAAGGGAAGTATCTGCAGGCAGTTCTTGAGCAAGCTCAAGAGACCCTTGGGAAGCAGAACTTGGGCCCTGCAAGCCTGGAAGATGCAAAAATAAAAATATCAGAACTGGTCTCACAAGTTTCAAATGAATGTCTCAGCAACGCAGTTACAGAAATAAGAGAAAGTTCAAGTATACACAGACTAGAGCCAAGGCAAATCCAGTTTGTTGAAAGTTCAGCCAATAACTGTTTGACTGCAGCTGAAGGATTCAAGGAGCATAGGCTACAAAACCACGGGGTACTCAAAGCATATGATGATAGTACATTATTTTGCCGAAAACAGTCCCAAGATCAAGAATCTCAATATTCCCTTAACAGAAGCTTAAGTGAGCGTAGAATGGGTCATCTGTATAGTGGTAAACAGTATCACAAATCAGAGGGAAGTGACAGTGATACAGAGGTTCTACATGAGTATATCACGCCTCAAAAGAATGGCGGAGGCAGCACAACCAGTTCAACATCAGGAAGCAAAGAAATAAATGTAGAGAAGCTATATCTTGATGAACCAAGCTGCAAAAGACAAACAGTTGACTATCAAAGAGAAAGCAAGCTACTAGATTTTGATCAACAAAGTTCAGGGAAGAATCTTGATCTAAATACTCACAATATAGATGATAACGATCAAGGTTATAGACATTTTGACTTGAACGGCTTCAGCTGGAGTTGA
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| Protein seq | MYHQHQGRSDLFTTRTSFPMERHLFLHGGNTQGDSGLVLSTDAKPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRLSKNLQGQANVGTTKNALGCTGVADRIPGTSALAMASASAIPQAEKTIQIGEALQMQIEVQRQLNEQLEVQRHLQLRIEAQGKYLQAVLEQAQETLGKQNLGPASLEDAKIKISELVSQVSNECLSNAVTEIRESSSIHRLEPRQIQFVESSANNCLTAAEGFKEHRLQNHGVLKAYDDSTLFCRKQSQDQESQYSLNRSLSERRMGHLYSGKQYHKSEGSDSDTEVLHEYITPQKNGGGSTTSSTSGSKEINVEKLYLDEPSCKRQTVDYQRESKLLDFDQQSSGKNLDLNTHNIDDNDQGYRHFDLNGFSWS |
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| Function | Myb-related protein 1 [UniProtKB/Swiss-Prot:Q9FK47] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_05G0371900 | OsMH63_05T0371900-mRNA-1 | Chr05 | 25100298 | 25102863 | - | maker | ||
| CDS seq | ATGTATCACCAACATCAGGGTCGGAGTGACCTCTTCACTACTAGGACATCCTTTCCAATGGAGCGGCATCTGTTTCTGCATGGAGGAAATACACAAGGAGATTCTGGGCTGGTTCTCTCAACTGACGCTAAACCTAGGTTGAAATGGACACCTGAGTTGCATCAGCGATTTGTAGATGCAGTTAATCAATTAGGTGGAGCAGAGAAAGCTACTCCAAAAACAGTCATGAGGCTCATGGGCATTCCAGGACTCACCTTATACCATCTGAAAAGCCATCTCCAGAAATACAGGCTCAGTAAGAATCTCCAAGGTCAAGCTAATGTTGGGACAACAAAGAATGCCCTTGGATGTACAGGTGTTGCTGATAGGATTCCTGGAACAAGTGCATTAGCGATGGCCAGTGCAAGCGCCATTCCACAGGCAGAGAAAACTATTCAAATCGGTGAAGCACTACAGATGCAAATTGAGGTGCAGAGGCAGCTAAATGAACAACTTGAGGTACAACGGCATCTACAGCTGCGGATAGAAGCCCAAGGGAAGTATCTGCAGGCAGTTCTTGAGCAAGCTCAAGAGACCCTTGGGAAGCAGAACTTGGGCCCTGCAAGCCTGGAAGATGCAAAAATAAAAATATCAGAACTGGTCTCACAAGTTTCAAATGAATGTCTCAGCAACGCAGTTACAGAAATAAGAGAAAGTTCAAGTATACACAGACTAGAGCCAAGGCAAATCCAGTTTGTTGAAAGTTCAGCCAATAACTGTTTGACTGCAGCTGAAGGATTCAAGGAGCATAGGCTACAAAACCACGGGGTACTCAAAGCATATGATGATAGTACATTATTTTGCCGAAAACAGTCCCAAGATCAAGAATCTCAATATTCCCTTAACAGAAGCTTAAGTGAGCGTAGAATGGGTCATCTGTATAGTGGTAAACAGTATCACAAATCAGAGGGAAGTGACAGTGATACAGAGGTTCTACATGAGTATATCACGCCTCAAAAGAATGGCGGAGGCAGCACAACCAGTTCAACATCAGGAAGCAAAGAAATAAATGTAGAGAAGCTATATCTTGATGAACCAAGCTGCAAAAGACAAACAGTTGACTATCAAAGAGAAAGCAAGCTACTAGATTTTGATCAACAAAGTTCAGGGAAGAATCTTGATCTAAATACTCACAATATAGATGATAACGATCAAGGTTATAGACATTTTGACTTGAACGGCTTCAGCTGGAGTTGA
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| Protein seq | MYHQHQGRSDLFTTRTSFPMERHLFLHGGNTQGDSGLVLSTDAKPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRLSKNLQGQANVGTTKNALGCTGVADRIPGTSALAMASASAIPQAEKTIQIGEALQMQIEVQRQLNEQLEVQRHLQLRIEAQGKYLQAVLEQAQETLGKQNLGPASLEDAKIKISELVSQVSNECLSNAVTEIRESSSIHRLEPRQIQFVESSANNCLTAAEGFKEHRLQNHGVLKAYDDSTLFCRKQSQDQESQYSLNRSLSERRMGHLYSGKQYHKSEGSDSDTEVLHEYITPQKNGGGSTTSSTSGSKEINVEKLYLDEPSCKRQTVDYQRESKLLDFDQQSSGKNLDLNTHNIDDNDQGYRHFDLNGFSWS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_05G0371900 | OsMH63_05T0371900-mRNA-2 | Chr05 | 25100298 | 25102862 | - | maker | ||
| CDS seq | ATGTATCACCAACATCAGGGTCGGAGTGACCTCTTCACTACTAGGACATCCTTTCCAATGGAGCGGCATCTGTTTCTGCATGGAGGAAATACACAAGGAGATTCTGGGCTGGTTCTCTCAACTGACGCTAAACCTAGGTTGAAATGGACACCTGAGTTGCATCAGCGATTTGTAGATGCAGTTAATCAATTAGGTGGAGCAGAGAAAGCTACTCCAAAAACAGTCATGAGGCTCATGGGCATTCCAGGACTCACCTTATACCATCTGAAAAGCCATCTCCAGAAATACAGGCTCAGTAAGAATCTCCAAGGTCAAGCTAATGTTGGGACAACAAAGAATGGTGTTGCTGATAGGATTCCTGGAACAAGTGCATTAGCGATGGCCAGTGCAAGCGCCATTCCACAGGCAGAGAAAACTATTCAAATCGGTGAAGCACTACAGATGCAAATTGAGGTGCAGAGGCAGCTAAATGAACAACTTGAGGTACAACGGCATCTACAGCTGCGGATAGAAGCCCAAGGGAAGTATCTGCAGGCAGTTCTTGAGCAAGCTCAAGAGACCCTTGGGAAGCAGAACTTGGGCCCTGCAAGCCTGGAAGATGCAAAAATAAAAATATCAGAACTGGTCTCACAAGTTTCAAATGAATGTCTCAGCAACGCAGTTACAGAAATAAGAGAAAGTTCAAGTATACACAGACTAGAGCCAAGGCAAATCCAGTTTGTTGAAAGTTCAGCCAATAACTGTTTGACTGCAGCTGAAGGATTCAAGGAGCATAGGCTACAAAACCACGGGGTACTCAAAGCATATGATGATAGTACATTATTTTGCCGAAAACAGTCCCAAGATCAAGAATCTCAATATTCCCTTAACAGAAGCTTAAGTGAGCGTAGAATGGGTCATCTGTATAGTGGTAAACAGTATCACAAATCAGAGGGAAGTGACAGTGATACAGAGGTTCTACATGAGTATATCACGCCTCAAAAGAATGGCGGAGGCAGCACAACCAGTTCAACATCAGGAAGCAAAGAAATAAATGTAGAGAAGCTATATCTTGATGAACCAAGCTGCAAAAGACAAACAGTTGACTATCAAAGAGAAAGCAAGCTACTAGATTTTGATCAACAAAGTTCAGGGAAGAATCTTGATCTAAATACTCACAATATAGATGATAACGATCAAGGTTATAGACATTTTGACTTGAACGGCTTCAGCTGGAGTTGA
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| Protein seq | MYHQHQGRSDLFTTRTSFPMERHLFLHGGNTQGDSGLVLSTDAKPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRLSKNLQGQANVGTTKNGVADRIPGTSALAMASASAIPQAEKTIQIGEALQMQIEVQRQLNEQLEVQRHLQLRIEAQGKYLQAVLEQAQETLGKQNLGPASLEDAKIKISELVSQVSNECLSNAVTEIRESSSIHRLEPRQIQFVESSANNCLTAAEGFKEHRLQNHGVLKAYDDSTLFCRKQSQDQESQYSLNRSLSERRMGHLYSGKQYHKSEGSDSDTEVLHEYITPQKNGGGSTTSSTSGSKEINVEKLYLDEPSCKRQTVDYQRESKLLDFDQQSSGKNLDLNTHNIDDNDQGYRHFDLNGFSWS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.9779855 | 4.4505925 | 1.948417 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0488600 | RBH | 1.149337 | 2.822825 | 0.287732 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g40960 | RBH | 0.777241 | 1.898585 | 0.074068 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0488600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0021580 | RBH | 0.059973 | 0.000000 | 0.816807 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0021540 | RBH | 0.438572 | 0.000000 | 0.430555 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0021460 | RBH | 0.194023 | 3.008718 | 1.541019 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0021470 | RBH | 0.0 | 0.136636 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0021580 | RBH | 2.274400 | 0.0 | 3.959361 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0021130 | RBH | 0.367225 | 0.0 | 0.763378 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0381600 | RBH | 3.5623565 | 1.4150175 | 1.1881835 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0021430 | RBH | 0.612805 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0021350 | RBH | 0.415777 | 3.057731 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0021460 | RBH | 5.804794 | 10.411734 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0021530 | RBH | 0.248752 | 0.322169 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0021510 | RBH | 0.612698 | 2.057995 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G020960 | RBH | 0.101035 | 0.149795 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0021390 | RBH | 1.699265 | 0.000000 | 4.601835 |
| Os XI: R9311 | R9311 | AGIS | R9311C05g20494 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_05g0255200 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_05g0256700 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_05g0246100 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_05g0261000 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0509178600.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0520276400.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_023596 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0517483600.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0519427800.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0511255800.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0512852400.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0515175200.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0512371400.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0510183200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0509115400.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0512252000.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0519200000.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0511527000.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0513004600.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0511432400.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0509190200.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0509197600.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0512792000.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0511079800.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0511363200.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0525070400.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0514998800.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0510562000.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0509143400.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0512210400.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0512465600.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0515853600.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0510854800.01 | RBH | None | None | None |
