Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0338200 | OGI:04066360 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr04:23200902-23202613 | ||||||||
| Gene Symbol | OsZHD8 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | TTAGAAGCGCGACAAGAACCCGCCACGAGCCCCACGAGAACGAGACGAGACGCTGCTCACGCTAGCGGCCGCGACGCGACGTGGGGAGCCGTGCACCCGAGCGAGCCGTTCGATCCCCCGGCTGGCTCCACCGCCGCCGCCGCGCTGTCGCCTCCGCCTTGGCCGTCGCATTATCCTCCGCCAAATGCCAACAAAAACCTCAGCACTACTGTACCGACACGACGTTGGTGAGAGCCAAATCTCGGGGAAGAAAAAAATCTCGCGCCCAGGCCGAAGCAAATGGAAGCTTCCTGCAGTAGTGGAGGCACACGCACCAACCCCAACGCGCGACCGATGCACTCTCACTCACTCTCACTGCCGTGGCCGATGCTGTTTAATGAGCTAGGATACGATGATTAGTCACTGCAATGCAATCAGTGGTACTACGACCGAAAATGAGATGAGACAGTGCAGCAGCAGCTACTACTACTACAACAGAGTAGTACTAGTGGGGGGAGAAATTACAGATATGCCCTCCATTAGCTTACCACGGCCGCGGTGCGGGGGGCAGGAGGGAAGTGGGTCATTAATTAATTAACGCGGAACTGAGCGACTAGCGGCTAATTAATCCATGGGATATTGCTAGTTGAATTAGAGCTAATTAGACCCTAGTGATCAAGTGAACTCATTAGCTAGCTAAGCTAAGCTAGGCTAAGGCTAAGCTAGTGTGTGCCAGTGACAGTGTGTCTGGCTGTCTAGCTAGACGCTGATCGGTGAAGGGGAGGGGGAGGACACGGCGGCGCGGGGCGGGGAGTCGTCGGTGTCGTCGTCGTCGCCGTCGCCGTCGCCGCTGATGCCGGTGCCGAGGCCGGTGCCGAGGCCGATGCCGGCGCCGGGGTTCATGACGCCGGCGGCGGCGGCGGCGGCGGATGTCGGGGAGGAGGCGAGCTGGTTCTTGTGGTTGTGCATCCAGACCTTGAGGACGTGGCGCTTGACGCCGATCTCGACGCAGAAGCGGTCCAGGGCGCCGTCGTCGTTGCGGTTGATGCGCCATCCTTGCTTCTCGGCGAACTCCCGCATCCGCTCCTTCTGCTCCGGCGTGAACTTGGTCCGGAACCGCTTCCGCCCGAAGATGCCGCCGCCGCCGCTCCCGCTCCCGCCGGCGCTGCCGGGGCCGAAGTCGTCCATCCGCGGGGGCGTCTCCGAGCCGGCGCGGCCTGCCGCCGCCGCAGCCGCGTGGTGCCACGCCGCGGCGGGCACGGCGTGGTACGGCAGCGCGAGCTGCGGCGGCGGCGGCGGCGCCGGCACGGACGACGGGAGGAAGCCCTGCAGCGCGGCGTGGTGCGAGTGCGGCTGCGGCGGTGGCGGCGGGCGGAAGAACACCGGCCCGCCGCCGATGCCCGCGGCGGCGCGGCGGTGGAAGCTGCGGTGGCAGCCGCACGCGGCGCACTTGAGCGAGTCGGGCGACGCCGGCATGTACTCCCCGCACCCGTCGAACGCCTGCCCGCCCATCGCCGCCGCGTGGTTCCGCATGCACTCCTTGTACTTCCCTCCACCACCTCCACCTACACCTCCTCCCCCGCCGGCGCTGCCGCCCTCGTAGGGCACCAGGCTCAGGTGATCCATCATGACGATCTCACTCGCTGTCACTCCCGGCGTCGGTGGCGGCGGCGGCGGCGGCGTCGCTATCGGAGGAGACGAGGCGAGGCGCGGTGTTTGTTGGTGTTGATAGC
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| CDS seq | ATGATGGATCACCTGAGCCTGGTGCCCTACGAGGGCGGCAGCGCCGGCGGGGGAGGAGGTGTAGGTGGAGGTGGTGGAGGGAAGTACAAGGAGTGCATGCGGAACCACGCGGCGGCGATGGGCGGGCAGGCGTTCGACGGGTGCGGGGAGTACATGCCGGCGTCGCCCGACTCGCTCAAGTGCGCCGCGTGCGGCTGCCACCGCAGCTTCCACCGCCGCGCCGCCGCGGGCATCGGCGGCGGGCCGGTGTTCTTCCGCCCGCCGCCACCGCCGCAGCCGCACTCGCACCACGCCGCGCTGCAGGGCTTCCTCCCGTCGTCCGTGCCGGCGCCGCCGCCGCCGCCGCAGCTCGCGCTGCCGTACCACGCCGTGCCCGCCGCGGCGTGGCACCACGCGGCTGCGGCGGCGGCAGGCCGCGCCGGCTCGGAGACGCCCCCGCGGATGGACGACTTCGGCCCCGGCAGCGCCGGCGGGAGCGGGAGCGGCGGCGGCGGCATCTTCGGGCGGAAGCGGTTCCGGACCAAGTTCACGCCGGAGCAGAAGGAGCGGATGCGGGAGTTCGCCGAGAAGCAAGGATGGCGCATCAACCGCAACGACGACGGCGCCCTGGACCGCTTCTGCGTCGAGATCGGCGTCAAGCGCCACGTCCTCAAGGTCTGGATGCACAACCACAAGAACCAGCTCGCCTCCTCCCCGACATCCGCCGCCGCCGCCGCCGCCGGCGTCATGAACCCCGGCGCCGGCATCGGCCTCGGCACCGGCCTCGGCACCGGCATCAGCGGCGACGGCGACGGCGACGACGACGACACCGACGACTCCCCGCCCCGCGCCGCCGTGTCCTCCCCCTCCCCTTCACCGATCAGCATTTGGCTCTCACCAACGTCGTGTCGGTACAGTAGTGCTGAGGTTTTTGTTGGCATTTGGCGGAGGATAATGCGACGGCCAAGGCGGAGGCGACAGCGCGGCGGCGGCGGTGGAGCCAGCCGGGGGATCGAACGGCTCGCTCGGGTGCACGGCTCCCCACGTCGCGTCGCGGCCGCTAGCGTGAGCAGCGTCTCGTCTCGTTCTCGTGGGGCTCGTGGCGGGTTCTTGTCGCGCTTCTAA
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| Protein seq | MMDHLSLVPYEGGSAGGGGGVGGGGGGKYKECMRNHAAAMGGQAFDGCGEYMPASPDSLKCAACGCHRSFHRRAAAGIGGGPVFFRPPPPPQPHSHHAALQGFLPSSVPAPPPPPQLALPYHAVPAAAWHHAAAAAAGRAGSETPPRMDDFGPGSAGGSGSGGGGIFGRKRFRTKFTPEQKERMREFAEKQGWRINRNDDGALDRFCVEIGVKRHVLKVWMHNHKNQLASSPTSAAAAAAGVMNPGAGIGLGTGLGTGISGDGDGDDDDTDDSPPRAAVSSPSPSPISIWLSPTSCRYSSAEVFVGIWRRIMRRPRRRRQRGGGGGASRGIERLARVHGSPRRVAAASVSSVSSRSRGARGGFLSRF |
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| Function | Zinc-finger homeodomain protein 8 [UniProtKB/Swiss-Prot:Q7X7N3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0338200 | OsMH63_04T0338200.1 | Chr04 | 23200902 | 23202613 | - | maker | ||
| CDS seq | ATGATGGATCACCTGAGCCTGGTGCCCTACGAGGGCGGCAGCGCCGGCGGGGGAGGAGGTGTAGGTGGAGGTGGTGGAGGGAAGTACAAGGAGTGCATGCGGAACCACGCGGCGGCGATGGGCGGGCAGGCGTTCGACGGGTGCGGGGAGTACATGCCGGCGTCGCCCGACTCGCTCAAGTGCGCCGCGTGCGGCTGCCACCGCAGCTTCCACCGCCGCGCCGCCGCGGGCATCGGCGGCGGGCCGGTGTTCTTCCGCCCGCCGCCACCGCCGCAGCCGCACTCGCACCACGCCGCGCTGCAGGGCTTCCTCCCGTCGTCCGTGCCGGCGCCGCCGCCGCCGCCGCAGCTCGCGCTGCCGTACCACGCCGTGCCCGCCGCGGCGTGGCACCACGCGGCTGCGGCGGCGGCAGGCCGCGCCGGCTCGGAGACGCCCCCGCGGATGGACGACTTCGGCCCCGGCAGCGCCGGCGGGAGCGGGAGCGGCGGCGGCGGCATCTTCGGGCGGAAGCGGTTCCGGACCAAGTTCACGCCGGAGCAGAAGGAGCGGATGCGGGAGTTCGCCGAGAAGCAAGGATGGCGCATCAACCGCAACGACGACGGCGCCCTGGACCGCTTCTGCGTCGAGATCGGCGTCAAGCGCCACGTCCTCAAGGTCTGGATGCACAACCACAAGAACCAGCTCGCCTCCTCCCCGACATCCGCCGCCGCCGCCGCCGCCGGCGTCATGAACCCCGGCGCCGGCATCGGCCTCGGCACCGGCCTCGGCACCGGCATCAGCGGCGACGGCGACGGCGACGACGACGACACCGACGACTCCCCGCCCCGCGCCGCCGTGTCCTCCCCCTCCCCTTCACCGATCAGCATTTGGCTCTCACCAACGTCGTGTCGGTACAGTAGTGCTGAGGTTTTTGTTGGCATTTGGCGGAGGATAATGCGACGGCCAAGGCGGAGGCGACAGCGCGGCGGCGGCGGTGGAGCCAGCCGGGGGATCGAACGGCTCGCTCGGGTGCACGGCTCCCCACGTCGCGTCGCGGCCGCTAGCGTGAGCAGCGTCTCGTCTCGTTCTCGTGGGGCTCGTGGCGGGTTCTTGTCGCGCTTCTAA
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| Protein seq | MMDHLSLVPYEGGSAGGGGGVGGGGGGKYKECMRNHAAAMGGQAFDGCGEYMPASPDSLKCAACGCHRSFHRRAAAGIGGGPVFFRPPPPPQPHSHHAALQGFLPSSVPAPPPPPQLALPYHAVPAAAWHHAAAAAAGRAGSETPPRMDDFGPGSAGGSGSGGGGIFGRKRFRTKFTPEQKERMREFAEKQGWRINRNDDGALDRFCVEIGVKRHVLKVWMHNHKNQLASSPTSAAAAAAGVMNPGAGIGLGTGLGTGISGDGDGDDDDTDDSPPRAAVSSPSPSPISIWLSPTSCRYSSAEVFVGIWRRIMRRPRRRRQRGGGGGASRGIERLARVHGSPRRVAAASVSSVSSRSRGARGGFLSRF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.721785 | 0.2460445 | 31.8812725 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0434500 | RBH | 0.000000 | 0.0 | 0.490721 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g35500 | RBH | 0.000000 | 0.0 | 0.120760 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0434500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0013880 | RBH | 0.0 | 0.0 | 0.530718 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0014730 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0014480 | RBH | 0.0 | 0.0 | 1.313591 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0014060 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0014380 | RBH | 0.0 | 0.0 | 1.787626 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0013300 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0335100 | RBH | 0.8499355 | 0.04403 | 71.8708915 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0013840 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0013620 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0013590 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0014190 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0014410 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G013480 | RBH | 0.0 | 0.0 | 0.829180 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0013490 | RBH | 0.0 | 0.0 | 1.063546 |
| Os XI: R9311 | R9311 | AGIS | R9311C04g16041 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_04g0193000 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_04g0186800 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_04g0176100 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_04g0188100 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0407007600.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0416020000.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_015978 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0480200624.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0480001057.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0407815200.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0408590800.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0411113000.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0407808800.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0407770600.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0406930600.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0408038600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0415138200.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0408811400.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0408710400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0409312600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0406997000.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0406987600.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0408546600.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0408605200.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0408346000.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0419537000.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0411209400.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0406899600.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0406929800.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0408200600.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0407995000.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0411804800.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0406901500.01 | RBH | None | None | None |
