Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0594200 | OGI:03097300 | 21/50 | Minghui 63 | MH63RS3 | HZAU | Chr03:37985648-37986622 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_INV0349470,02428_MH63RS3_INV0346060,Basmati1_MH63RS3_INV0338530,Lemont_MH63RS3_INV0342980,128077_MH63RS3_INV0340760,ZH11_MH63RS3_INV0343740,DHX2_MH63RS3_INV0343750,KY131_MH63RS3_INV0342600,Kosh_MH63RS3_INV0343800,132278_MH63RS3_INV0345450,117425_MH63RS3_INV0344460,Azucena_MH63RS3_INV0342050,OglaRS2_MH63RS3_INV0350450,Nipponbare_MH63RS3_INV0341540,LJ_MH63RS3_INV0342100,
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| DNA seq | TCAAAAACTTGCTTCATTAGGGTTCGTGCCAAGAATGTCGTCGAGGATTTCTCCGGCAGCCAGCCGCGCGATGATCTCCTCTTCGTCCATGCAAGGTCCGTTCGTCGTCTCGATGAATTCGTCTCCGCCGCCGGCAACCTCCATCGTCGGAGCCCACGGCAATGGCTCGTCGTTCATCAGATACCTCATATACTGCTCCGTCGTGGCCGTGTCGAATTCCACTCCCAAGTTGTCGTCCATCGGCGCCGACAGCAACGCATCCAGGTCCAACTCCGGCAGGATCGCCGGCTGCTCGCCGTGCTCGCTCCCGGCCTCCTCTTGCCGCGGCCGCGCGCTGGGCGGCGCCTCCGGCTGATCCGCGCCGTCGTCCGCCTTCCTCTTCGAGCCGGAGAATGGCGAATCGGCTGACTTCGCCGCCGCCGCCGCCGTGCGCGCCTCCGCGCAGACCGCGCGCGGCGAGCGGTAGACCTTGCAGAGCACCTGCTTGTCTGCTCCGTCGATGGCGTCGTCGTCGAGGCCGTACTCCGTCATGCACCACCCTAGCCTCGTGAACGTGCGCGCCGACCCCGACGACGACGACTCGTAGACGCCATAGGAGAACTTCTGGAGGTACCCGACGCGGCGGCCATCGGCGCCGATCACGGCCTTCTTGCCGCCCTCCGACTTCCACACGCTCTCGCCGCCGCCGCCGCCGCCGACCGCGCGCTGCCGCCTCCCGGAGGTCTTGCGCTTGCTGGTGAAGGGCGGGGAGCAGAAGAAGTACCAGACGCTGCTGCTCCCATGGGTGCCCGGCGCCGGTCTGTGCTCGCCGACGAGCTCGGCCGGATCGGCGGAGTAGACGTCGGCGTGGTTGATGAGGCGGTCCTCGAAGGGGATCTTGGCGATGCTGGGGCGGAGGAAGAGGGTGATGAGGCCGTCGTCGGAAGGGTGGAAGACGTAGCCTGGCTCAAGAGCGATCTCGTCGTCGTCGGCCAT
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| CDS seq | ATGGCCGACGACGACGAGATCGCTCTTGAGCCAGGCTACGTCTTCCACCCTTCCGACGACGGCCTCATCACCCTCTTCCTCCGCCCCAGCATCGCCAAGATCCCCTTCGAGGACCGCCTCATCAACCACGCCGACGTCTACTCCGCCGATCCGGCCGAGCTCGTCGGCGAGCACAGACCGGCGCCGGGCACCCATGGGAGCAGCAGCGTCTGGTACTTCTTCTGCTCCCCGCCCTTCACCAGCAAGCGCAAGACCTCCGGGAGGCGGCAGCGCGCGGTCGGCGGCGGCGGCGGCGGCGAGAGCGTGTGGAAGTCGGAGGGCGGCAAGAAGGCCGTGATCGGCGCCGATGGCCGCCGCGTCGGGTACCTCCAGAAGTTCTCCTATGGCGTCTACGAGTCGTCGTCGTCGGGGTCGGCGCGCACGTTCACGAGGCTAGGGTGGTGCATGACGGAGTACGGCCTCGACGACGACGCCATCGACGGAGCAGACAAGCAGGTGCTCTGCAAGGTCTACCGCTCGCCGCGCGCGGTCTGCGCGGAGGCGCGCACGGCGGCGGCGGCGGCGAAGTCAGCCGATTCGCCATTCTCCGGCTCGAAGAGGAAGGCGGACGACGGCGCGGATCAGCCGGAGGCGCCGCCCAGCGCGCGGCCGCGGCAAGAGGAGGCCGGGAGCGAGCACGGCGAGCAGCCGGCGATCCTGCCGGAGTTGGACCTGGATGCGTTGCTGTCGGCGCCGATGGACGACAACTTGGGAGTGGAATTCGACACGGCCACGACGGAGCAGTATATGAGGTATCTGATGAACGACGAGCCATTGCCGTGGGCTCCGACGATGGAGGTTGCCGGCGGCGGAGACGAATTCATCGAGACGACGAACGGACCTTGCATGGACGAAGAGGAGATCATCGCGCGGCTGGCTGCCGGAGAAATCCTCGACGACATTCTTGGCACGAACCCTAATGAAGCAAGTTTTTGA
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| Protein seq | MADDDEIALEPGYVFHPSDDGLITLFLRPSIAKIPFEDRLINHADVYSADPAELVGEHRPAPGTHGSSSVWYFFCSPPFTSKRKTSGRRQRAVGGGGGGESVWKSEGGKKAVIGADGRRVGYLQKFSYGVYESSSSGSARTFTRLGWCMTEYGLDDDAIDGADKQVLCKVYRSPRAVCAEARTAAAAAKSADSPFSGSKRKADDGADQPEAPPSARPRQEEAGSEHGEQPAILPELDLDALLSAPMDDNLGVEFDTATTEQYMRYLMNDEPLPWAPTMEVAGGGDEFIETTNGPCMDEEEIIARLAAGEILDDILGTNPNEASF |
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| Function | NAC domain-containing protein 72 [UniProtKB/Swiss-Prot:Q93VY3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0594200 | OsMH63_03T0594200.1 | Chr03 | 37985648 | 37986622 | - | maker | ||
| CDS seq | ATGGCCGACGACGACGAGATCGCTCTTGAGCCAGGCTACGTCTTCCACCCTTCCGACGACGGCCTCATCACCCTCTTCCTCCGCCCCAGCATCGCCAAGATCCCCTTCGAGGACCGCCTCATCAACCACGCCGACGTCTACTCCGCCGATCCGGCCGAGCTCGTCGGCGAGCACAGACCGGCGCCGGGCACCCATGGGAGCAGCAGCGTCTGGTACTTCTTCTGCTCCCCGCCCTTCACCAGCAAGCGCAAGACCTCCGGGAGGCGGCAGCGCGCGGTCGGCGGCGGCGGCGGCGGCGAGAGCGTGTGGAAGTCGGAGGGCGGCAAGAAGGCCGTGATCGGCGCCGATGGCCGCCGCGTCGGGTACCTCCAGAAGTTCTCCTATGGCGTCTACGAGTCGTCGTCGTCGGGGTCGGCGCGCACGTTCACGAGGCTAGGGTGGTGCATGACGGAGTACGGCCTCGACGACGACGCCATCGACGGAGCAGACAAGCAGGTGCTCTGCAAGGTCTACCGCTCGCCGCGCGCGGTCTGCGCGGAGGCGCGCACGGCGGCGGCGGCGGCGAAGTCAGCCGATTCGCCATTCTCCGGCTCGAAGAGGAAGGCGGACGACGGCGCGGATCAGCCGGAGGCGCCGCCCAGCGCGCGGCCGCGGCAAGAGGAGGCCGGGAGCGAGCACGGCGAGCAGCCGGCGATCCTGCCGGAGTTGGACCTGGATGCGTTGCTGTCGGCGCCGATGGACGACAACTTGGGAGTGGAATTCGACACGGCCACGACGGAGCAGTATATGAGGTATCTGATGAACGACGAGCCATTGCCGTGGGCTCCGACGATGGAGGTTGCCGGCGGCGGAGACGAATTCATCGAGACGACGAACGGACCTTGCATGGACGAAGAGGAGATCATCGCGCGGCTGGCTGCCGGAGAAATCCTCGACGACATTCTTGGCACGAACCCTAATGAAGCAAGTTTTTGA
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| Protein seq | MADDDEIALEPGYVFHPSDDGLITLFLRPSIAKIPFEDRLINHADVYSADPAELVGEHRPAPGTHGSSSVWYFFCSPPFTSKRKTSGRRQRAVGGGGGGESVWKSEGGKKAVIGADGRRVGYLQKFSYGVYESSSSGSARTFTRLGWCMTEYGLDDDAIDGADKQVLCKVYRSPRAVCAEARTAAAAAKSADSPFSGSKRKADDGADQPEAPPSARPRQEEAGSEHGEQPAILPELDLDALLSAPMDDNLGVEFDTATTEQYMRYLMNDEPLPWAPTMEVAGGGDEFIETTNGPCMDEEEIIARLAAGEILDDILGTNPNEASF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.0064425 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0777000 | SBH | 0.633956 | 0.667374 | 1.664865 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g61319 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0777000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0040600 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0040280 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0040350 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0040630 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0040170 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0593600 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0039920 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0596900 | RBH | 0.0083025 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0040460 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0040430 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0040050 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0040130 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0040240 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G039960 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0039700 | SBH | 0.0 | 0.0 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C03g14284 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_03g0463600 | SBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_03g0460600 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_03g0438300 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_03g0473200 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0305880500.01 | SBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0313688900.01 | SBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_009688 | SBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0311367300.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0380000889.01 | SBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0306513300.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0305883600.01 | SBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0380001412.01 | SBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0306514400.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0306539800.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0305844200.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0305862800.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0312872600.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0305864000.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0305866200.01 | SBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0306181300.01 | SBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0305909100.01 | SBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0305890700.01 | SBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0305856100.01 | SBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0363719000.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0380001102.01 | SBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0316233200.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0309025400.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0305838100.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0305856400.01 | SBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0305904000.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0305880400.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0309602200.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0305908700.01 | SBH | None | None | None |
