Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0499700 | OGI:03081620 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr03:32205592-32207089 | ||||||||
| Gene Symbol | OsZHD11 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | TCTCCCGTTTCATCCCCACACATCATGAGATACATTTGATACTACAGCTCTACTAGTGCTGCCGCTACTCATGGCGCTGATAGCCATACGCGCATGTGTGCAAGTGCAATGCAACCCAGCTCCCACAAAAAAGTCACAGCTAGCTAGCCATCGATAGCTCTCGGCGTCTCGCTCACATAGACCCTAGCAAAGCGAAGCACCGCGTTGCATGCGCCCAGCTGCTGCTCACCGCGCCACATCGCAGCTGCAGTAGAAGTAGATCAGAGAGAGGCGGAGACAGATCGAGATAGAGAGGACTAGAGGAGGAGGAAGAAGCAGCAATGGAGCAGCAGCAGGAGCGGCCGCGGGAGGTGTACAGGGAGTGCATGCGCAACCACGCGGCGAAGCTGGGGACCTACGCGAACGACGGCTGCTGCGAGTACACCCCCGACGACGGCCACCCGGCGGGCCTGCTCTGCGCGGCGTGCGGCTGCCACCGCAACTTCCACCGGAAGGACTTCCTCGACGGCCGCGCCACCGCCGCCGCCGGAGGGGCGGGAGGCGCCGGCGTCGGCGTCGCGCCAATGCTGCCGGCCCCCGGTGGAGGCGGGCCGCCGGGATACATGCACATGGCGGCGATGGGAGGAGCGGTGGGCGGCGGCGGCGGCGTCGACGGCGGCGGCGGCTCCGGGGGGAGGCGGCGGACGCGGACCAAGTTCACGGAGGAGCAGAAGGCGCGGATGCTGCGGTTCGCGGAGCGGCTCGGGTGGCGGATGCCGAAGCGGGAGCCCGGCCGCGCGCCCGGGGACGACGAGGTGGCGCGCTTCTGCCGGGAGATCGGCGTCAACCGGCAGGTCTTCAAGGTGTGGATGCACAACCACAAGGCCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCCCCGGCGCCGGCGGAGGCGCCCAGACGTCGTCGTCGACGACCAGGGGCGGCGGCGACGTCGGGGTGGGCTTGTCGCCGGCGATGGGCGGCGACGGCGAGGACGACGAGGAGGTGAGGGGGAGCGAGATGTGCATGTAGGAGCCACGTACTTACGTAATGCAGGCAGCATTGCAAATTTGCAATTGCATTGCTAGGGTGGGATAATTCACAATTTAATTAACTCTCTCTTTTTTTTTTGCTAATTTCTTTTATTTTTTGCTTCCCTGAGTTGATTCTTGCTGATGAGATTGATTGTTTTAACGGTGCCACTAATTAATTGTGTGTTATTATGATCATTCATTGGTCGATCGATTTTGTTGTAACACTCAAAGGAGATGCTTCATAATTTCTCCTCTTATTTCCCTGTATATCTTGCATAAGCTCACTACTCAAAAGAGATGCATTGTACTGAGGAAGTACGTAGTACATACGAAGGGCATGCTTCTTTTGTTATTCTTTTATTCGACATCAAGCAAGCATGAATTTATAGCACGCCAAGAATCAAGATGGGCATAAAGTTTTGGAAAACTGCTTCTGTTAATTCTATTGGAAGTTCGCGC
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| CDS seq | ATGGAGCAGCAGCAGGAGCGGCCGCGGGAGGTGTACAGGGAGTGCATGCGCAACCACGCGGCGAAGCTGGGGACCTACGCGAACGACGGCTGCTGCGAGTACACCCCCGACGACGGCCACCCGGCGGGCCTGCTCTGCGCGGCGTGCGGCTGCCACCGCAACTTCCACCGGAAGGACTTCCTCGACGGCCGCGCCACCGCCGCCGCCGGAGGGGCGGGAGGCGCCGGCGTCGGCGTCGCGCCAATGCTGCCGGCCCCCGGTGGAGGCGGGCCGCCGGGATACATGCACATGGCGGCGATGGGAGGAGCGGTGGGCGGCGGCGGCGGCGTCGACGGCGGCGGCGGCTCCGGGGGGAGGCGGCGGACGCGGACCAAGTTCACGGAGGAGCAGAAGGCGCGGATGCTGCGGTTCGCGGAGCGGCTCGGGTGGCGGATGCCGAAGCGGGAGCCCGGCCGCGCGCCCGGGGACGACGAGGTGGCGCGCTTCTGCCGGGAGATCGGCGTCAACCGGCAGGTCTTCAAGGTGTGGATGCACAACCACAAGGCCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCCCCGGCGCCGGCGGAGGCGCCCAGACGTCGTCGTCGACGACCAGGGGCGGCGGCGACGTCGGGGTGGGCTTGTCGCCGGCGATGGGCGGCGACGGCGAGGACGACGAGGAGGTGAGGGGGAGCGAGATGTGCATGTAG
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| Protein seq | MEQQQERPREVYRECMRNHAAKLGTYANDGCCEYTPDDGHPAGLLCAACGCHRNFHRKDFLDGRATAAAGGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGGGSGGPGAGGGAQTSSSTTRGGGDVGVGLSPAMGGDGEDDEEVRGSEMCM |
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| Function | Zinc-finger homeodomain protein 11 [UniProtKB/Swiss-Prot:Q10DV5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0499700 | OsMH63_03T0499700.1 | Chr03 | 32205592 | 32207089 | + | maker | ||
| CDS seq | ATGGAGCAGCAGCAGGAGCGGCCGCGGGAGGTGTACAGGGAGTGCATGCGCAACCACGCGGCGAAGCTGGGGACCTACGCGAACGACGGCTGCTGCGAGTACACCCCCGACGACGGCCACCCGGCGGGCCTGCTCTGCGCGGCGTGCGGCTGCCACCGCAACTTCCACCGGAAGGACTTCCTCGACGGCCGCGCCACCGCCGCCGCCGGAGGGGCGGGAGGCGCCGGCGTCGGCGTCGCGCCAATGCTGCCGGCCCCCGGTGGAGGCGGGCCGCCGGGATACATGCACATGGCGGCGATGGGAGGAGCGGTGGGCGGCGGCGGCGGCGTCGACGGCGGCGGCGGCTCCGGGGGGAGGCGGCGGACGCGGACCAAGTTCACGGAGGAGCAGAAGGCGCGGATGCTGCGGTTCGCGGAGCGGCTCGGGTGGCGGATGCCGAAGCGGGAGCCCGGCCGCGCGCCCGGGGACGACGAGGTGGCGCGCTTCTGCCGGGAGATCGGCGTCAACCGGCAGGTCTTCAAGGTGTGGATGCACAACCACAAGGCCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCCCCGGCGCCGGCGGAGGCGCCCAGACGTCGTCGTCGACGACCAGGGGCGGCGGCGACGTCGGGGTGGGCTTGTCGCCGGCGATGGGCGGCGACGGCGAGGACGACGAGGAGGTGAGGGGGAGCGAGATGTGCATGTAG
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| Protein seq | MEQQQERPREVYRECMRNHAAKLGTYANDGCCEYTPDDGHPAGLLCAACGCHRNFHRKDFLDGRATAAAGGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEEQKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGGGSGGPGAGGGAQTSSSTTRGGGDVGVGLSPAMGGDGEDDEEVRGSEMCM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.411955 | 0.359394 | 1.1137435 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0718500 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g50920 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0718500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0032610 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0032320 | RBH | 0.106995 | 0.473923 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0032380 | RBH | 0.0 | 2.713159 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0032480 | RBH | 0.0 | 0.058429 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0032200 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0031850 | RBH | 0.0 | 0.162124 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0499200 | RBH | 0.370856 | 0 | 1.0684655 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0032270 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0032300 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0032290 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0032060 | RBH | 0.0 | 0.0 | 0.026061 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0032080 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G032040 | RBH | 0.0 | 1.084669 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0031890 | RBH | 0.0 | 0.0 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C03g13382 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_03g0374900 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_03g0374200 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_03g0352600 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_03g0383400 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0305526300.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0313136700.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_008846 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0310994300.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0380000834.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0306143900.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0305526300.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0380001356.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0306139900.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0306173500.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0305489500.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0305507100.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0312317300.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0305509500.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0305508100.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0305825700.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0305557300.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0305536900.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0305503300.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0306940300.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0306355900.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0315679100.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0308476100.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0305476300.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0305504900.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0305550700.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0305527900.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0308865300.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0305553900.01 | RBH | None | None | None |
