Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0206800 | OGI:03033260 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr03:12845461-12846612 | ||||||||
| Gene Symbol | OsOFP13,OsOFP9 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | AAAGAGAAAAGAAAACTATGTTTAGTTTACTTAACCTGACAAGCAACCCGATCTCTTTTAACACAAGCGCCATGTCTCAAGAATGTACAAGAAGTCAAGAACAGAAATTAACAGTAACTGATGACGAGTTGATCAGTCATCACTCGGATGGAAGTAACCATGAAGAATTGATCAATTGAGCACGCCATGATCGATCAACATGCATGCATCGAGTTGAGCAATGGATTCACTGAGCTGGTTTGATCACTGGCCGGGAAGAAGCCTCTGGCTGCCGAGGTGGATCCAGACGAGGACGACGCGGCGGAAGAGCGCGACGATGGTGCGGTGGTGCTCGGCGGCGTTGAGCGAGAGGTAGCAGGCGAGGAGGTCCTGCAGGTCCTCCAGCCGACGGACGCCATTGGTGCACAGCATCTCGATCATGCTGTCCACCAGCTCCAGCTCCGGCTCCGTCGACTCCAACACCACCGCCTCGCTCTCCCGCAGCCACATCCGCCGCCGCCGCGGCCGCCGGCTCGGCCTCCCCGCGCTCACCGACGACGACGACGACGCCGGCGCCGGCGCCGACACCGGTGTGCCGGCATTGTTGCTGTCGTGGCCGCCGCCGCTGCTGCCGACGCGGCGCAGCCTCCTGCTGGCGGCGGTCGGTCTCACGTGGAACCCCCGCGCCCTGGTAGACGGCGTCGTGGCCGCCGAGGTGCTTGAGCTGTCCGACGCCTCGTTCTTGCCGGCGGCGGCGTGCCGCCGGCTCGTGACGATGGGCCTCAGCTTGAGCTCCGGCGTCGCTGGCGGCGCGTCGAGGCCGTCGGCCCGGCGGTGGACCACGTCGACGCCGACGTCGAGAGCCTCCTCCTCCTCCACCTCGTCGTCGCACGGGAGCAACATGTCCTGCCTGTCCTCCTGGCGCGCGCGGTCGGCGCTGTTGAGGTAGTACGACTCCCTGTTGGGGCAGTAGCAGCAGCACGGGCTCAGGCCGCCGGCCGGCGCCGCCGCCGCCGGTGGCTGGCGTGGCGCCGCCGGGGGGACGGCGGACGCGTCGGAGGGTCGGGCCGTTGACGCGGGGCTCGCCCGCTTGCTCTTCTTCTTCCTCCTCCTCCGCAGCTTCAGCTTGTGCAACCATGACCAGCGGGAGGAGGAGGAGGAGGAGGCTGGCAT
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| CDS seq | ATGCCAGCCTCCTCCTCCTCCTCCTCCCGCTGGTCATGGTTGCACAAGCTGAAGCTGCGGAGGAGGAGGAAGAAGAAGAGCAAGCGGGCGAGCCCCGCGTCAACGGCCCGACCCTCCGACGCGTCCGCCGTCCCCCCGGCGGCGCCACGCCAGCCACCGGCGGCGGCGGCGCCGGCCGGCGGCCTGAGCCCGTGCTGCTGCTACTGCCCCAACAGGGAGTCGTACTACCTCAACAGCGCCGACCGCGCGCGCCAGGAGGACAGGCAGGACATGTTGCTCCCGTGCGACGACGAGGTGGAGGAGGAGGAGGCTCTCGACGTCGGCGTCGACGTGGTCCACCGCCGGGCCGACGGCCTCGACGCGCCGCCAGCGACGCCGGAGCTCAAGCTGAGGCCCATCGTCACGAGCCGGCGGCACGCCGCCGCCGGCAAGAACGAGGCGTCGGACAGCTCAAGCACCTCGGCGGCCACGACGCCGTCTACCAGGGCGCGGGGGTTCCACGTGAGACCGACCGCCGCCAGCAGGAGGCTGCGCCGCGTCGGCAGCAGCGGCGGCGGCCACGACAGCAACAATGCCGGCACACCGGTGTCGGCGCCGGCGCCGGCGTCGTCGTCGTCGTCGGTGAGCGCGGGGAGGCCGAGCCGGCGGCCGCGGCGGCGGCGGATGTGGCTGCGGGAGAGCGAGGCGGTGGTGTTGGAGTCGACGGAGCCGGAGCTGGAGCTGGTGGACAGCATGATCGAGATGCTGTGCACCAATGGCGTCCGTCGGCTGGAGGACCTGCAGGACCTCCTCGCCTGCTACCTCTCGCTCAACGCCGCCGAGCACCACCGCACCATCGTCGCGCTCTTCCGCCGCGTCGTCCTCGTCTGGATCCACCTCGGCAGCCAGAGGCTTCTTCCCGGCCAGTGA
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| Protein seq | MPASSSSSSRWSWLHKLKLRRRRKKKSKRASPASTARPSDASAVPPAAPRQPPAAAAPAGGLSPCCCYCPNRESYYLNSADRARQEDRQDMLLPCDDEVEEEEALDVGVDVVHRRADGLDAPPATPELKLRPIVTSRRHAAAGKNEASDSSSTSAATTPSTRARGFHVRPTAASRRLRRVGSSGGGHDSNNAGTPVSAPAPASSSSSVSAGRPSRRPRRRRMWLRESEAVVLESTEPELELVDSMIEMLCTNGVRRLEDLQDLLACYLSLNAAEHHRTIVALFRRVVLVWIHLGSQRLLPGQ |
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| Function | Transcription repressor OFP3 [UniProtKB/Swiss-Prot:Q9LVL4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0206800 | OsMH63_03T0206800-mRNA-1 | Chr03 | 12845461 | 12846612 | - | maker | ||
| CDS seq | ATGCCAGCCTCCTCCTCCTCCTCCTCCCGCTGGTCATGGTTGCACAAGCTGAAGCTGCGGAGGAGGAGGAAGAAGAAGAGCAAGCGGGCGAGCCCCGCGTCAACGGCCCGACCCTCCGACGCGTCCGCCGTCCCCCCGGCGGCGCCACGCCAGCCACCGGCGGCGGCGGCGCCGGCCGGCGGCCTGAGCCCGTGCTGCTGCTACTGCCCCAACAGGGAGTCGTACTACCTCAACAGCGCCGACCGCGCGCGCCAGGAGGACAGGCAGGACATGTTGCTCCCGTGCGACGACGAGGTGGAGGAGGAGGAGGCTCTCGACGTCGGCGTCGACGTGGTCCACCGCCGGGCCGACGGCCTCGACGCGCCGCCAGCGACGCCGGAGCTCAAGCTGAGGCCCATCGTCACGAGCCGGCGGCACGCCGCCGCCGGCAAGAACGAGGCGTCGGACAGCTCAAGCACCTCGGCGGCCACGACGCCGTCTACCAGGGCGCGGGGGTTCCACGTGAGACCGACCGCCGCCAGCAGGAGGCTGCGCCGCGTCGGCAGCAGCGGCGGCGGCCACGACAGCAACAATGCCGGCACACCGGTGTCGGCGCCGGCGCCGGCGTCGTCGTCGTCGTCGGTGAGCGCGGGGAGGCCGAGCCGGCGGCCGCGGCGGCGGCGGATGTGGCTGCGGGAGAGCGAGGCGGTGGTGTTGGAGTCGACGGAGCCGGAGCTGGAGCTGGTGGACAGCATGATCGAGATGCTGTGCACCAATGGCGTCCGTCGGCTGGAGGACCTGCAGGACCTCCTCGCCTGCTACCTCTCGCTCAACGCCGCCGAGCACCACCGCACCATCGTCGCGCTCTTCCGCCGCGTCGTCCTCGTCTGGATCCACCTCGGCAGCCAGAGGCTTCTTCCCGGCCAGTGA
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| Protein seq | MPASSSSSSRWSWLHKLKLRRRRKKKSKRASPASTARPSDASAVPPAAPRQPPAAAAPAGGLSPCCCYCPNRESYYLNSADRARQEDRQDMLLPCDDEVEEEEALDVGVDVVHRRADGLDAPPATPELKLRPIVTSRRHAAAGKNEASDSSSTSAATTPSTRARGFHVRPTAASRRLRRVGSSGGGHDSNNAGTPVSAPAPASSSSSVSAGRPSRRPRRRRMWLRESEAVVLESTEPELELVDSMIEMLCTNGVRRLEDLQDLLACYLSLNAAEHHRTIVALFRRVVLVWIHLGSQRLLPGQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.5061115 | 0.847861 | 0.4604305 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0336900 | RBH | 0.0 | 0.0 | 0.731035 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g21870 | RBH | 0.0 | 0.0 | 0.133687 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0336900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016960 | RBH | 0.0 | 0.0 | 1.076515 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016800 | RBH | 0.0 | 0.0 | 0.146190 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016820 | RBH | 0.0 | 1.747226 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016820 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0016600 | RBH | 0.908712 | 0.0 | 1.472339 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0468600 | RBH | 0.1534 | 0.6746155 | 0.4547945 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0016470 | RBH | 0.0 | 0.0 | 0.106984 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0211500 | RBH | 0.253398 | 0.077309 | 0.848691 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0016700 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0016740 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016770 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0016660 | RBH | 0.0 | 0.0 | 0.185939 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0016570 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G016520 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0016490 | RBH | 0.0 | 0.0 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C03g11684 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_03g0183600 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_03g0183300 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_03g0168700 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_03g0187700 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | NA | NA | NA | NA | NA |
| Os cB: Basmati1 | Basmati1 | SICAU | NA | NA | NA | NA | NA |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_007095 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0309872400.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0310647600.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0305035000.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0306226400.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0305030400.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0305071200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0717273100.01 | SBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0725315900.01 | SBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0717700300.01 | SBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0303698600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | NA | NA | NA | NA | NA |
| Os GJ-adm: LJ | LJ | SICAU | NA | NA | NA | NA | NA |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0305902200.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0716072700.01 | SBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0313767400.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | NA | NA | NA | NA | NA |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0716588100.01 | SBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y3551 | Y3551 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0718845700.01 | SBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0721904700.01 | SBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | NA | NA | NA | NA | NA |
