Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0072500 | OGI:03011790 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr03:4428595-4430334 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | TCACTTGGTTACCTCATTTCCATCATCAACAGTAGCTCGGATAATATGCACCTGGACAAAAATCAATTTTCAAGGATTATTCACATTATTCATATATAAAACATGCTTAAGTTACAGGTACAAATTTATTCAGACATATTGTTCAGTTCAGTAAAAATTAATACCTTGAAGGTTGTAGGCTTGACCAACTGAAATACTGTCGCATCTCCATCCAACAATCCATGGTCCAAAGCAAAGCCAGCCCAGCCACCACTTAGGCCATTCTTGTAGGCAAGGTAATTGGTATCAAATTGCTCGTCTTTCTCATCCAACAAAGTGACAATGGCATCATGTTTTGGCAGGTAAGTCTCGCAGAAATGCCTCGGTAAGCCCTTTTGATCATGCCACCAAACAAGTATTAGTACCACATGACAACAGTTCCCCTTAAAGAAGGGTTGCAGGGATGGGAATGTGATAGTGCAGTACTCACCAACCAAAATCCTCGGACCACATGTGAATGTAGCATTGGCTTCACGAAGGAGGGAAATTCAGGGTCAAGTTGTGATTCCAGTTCCTCTGCTTTTCTTGCTGCCTCGAGCCTAGCTTCCATGGAAATTGATCCACGGGTTGCCAGGTAGATACTGTCAATTGCTTTTCGTGGAGACCTGCAGAAGAAATCGGACAACGGGATGTAGTTTTGCACCTTTTGCTACTTAGTGGGAGGCAATACAGGCTTCATACGCTCATGTGGTAATGTTATTGTTATCACATAATGACATACCTTTTCATCCTCTCTGCGCCATCTGGTGCTACCTGCCGACAAATGCTACTTCTTAGTACAGAAAAGATGTTTCTTATGATGGTTACATACTTACATATGTGGATGCTAGGAACAATGGCACAATTTAAAATGCCATTTACTGAAAATTGTTAAGTTCTGCTAAGAATGGTTTGTTTCAGAGACTTATTTAATGCTCAGTAGTTCCTACCAAATTTGCACATTTTTTTATCAATTCAGTTGGTCAGAAAACGTGAAATACAGCTTCTTCACTGTGCAATAGGCCGTTTTTACAGCTTGCACTAGCTGGATTGACAGCCACGGCTAGAACGTATGAAAATCACGCTCAATAATTTGTAACCTTAAACTTAGAACCAGATGCATCAGAACAAGAAGCAGGTGTATCTGAACTTCTTTTTTTTTCTATGACTGAATATTACTGAATCTTTTTTTCTCCTTGACATTTATTACTGTGTAAATGGAACACCAAAGCAAAGCAGTTACCTCTGCATACTTGACCTCAGGGAGATTAGCGAGGCGCCGAGACCTCCTCGGAGGCGAGGGAGCCACGACCGCCGCCTCGATGATCCTACGCCTCTTCTGCTTCTGCTCCGCCGAAAAAAGAAATAAAACCAAAAAAAGAAAGATCAAATTAATGAACGGATCGAGCAGCGAGCGAGCAAGAGCAACCGATTAGAATGTAGAGCGCGGTGGCAGCATGAGTTGGTCACCATGGGGGAGGGGGTCTTGGGGGCGACGGCGATGGCGGCGGAGAGGTGGCGCAGGTTGAGCGCCTCCATCTTGCGCTTGTTCTCCTCCACCGTCCTCTCCCTCGCCGCCTCGTACGCCGTCATCCCCTTCTCCATCCCCATCCCCATCTCCCCCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCTCCCTACTCGATTTGCTGCGGCTTTGCGAGGCTGGAGAAGAAGGGTTTAAGCGAGGGAGAGAGAGAGAA
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| CDS seq | MGMGMEKGMTAYEAARERTVEENKRKMEALNLRHLSAAIAVAPKTPSPMKQKRRRIIEAAVVAPSPPRRSRRLANLPEVKYAEVAPDGAERMKRSPRKAIDSIYLATRGSISMEARLEAARKAEELESQLDPEFPSFVKPMLHSHVVRGFWLGLPRHFCETYLPKHDAIVTLLDEKDEQFDTNYLAYKNGLSGGWAGFALDHGLLDGDATVFQLVKPTTFKVHIIRATVDDGNEVTK |
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| Protein seq | MGMGMEKGMTAYEAARERTVEENKRKMEALNLRHLSAAIAVAPKTPSPMKQKRRRIIEAAVVAPSPPRRSRRLANLPEVKYAEVAPDGAERMKRSPRKAIDSIYLATRGSISMEARLEAARKAEELESQLDPEFPSFVKPMLHSHVVRGFWLGLPRHFCETYLPKHDAIVTLLDEKDEQFDTNYLAYKNGLSGGWAGFALDHGLLDGDATVFQLVKPTTFKVHIIRATVDDGNEVTK |
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| Function | B3 domain-containing protein Os03g0184500 [UniProtKB/Swiss-Prot:Q10QS9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0072500 | OsMH63_03T0072500.1 | Chr03 | 4428595 | 4430334 | - | maker | ||
| CDS seq | ATGGGGATGGGGATGGAGAAGGGGATGACGGCGTACGAGGCGGCGAGGGAGAGGACGGTGGAGGAGAACAAGCGCAAGATGGAGGCGCTCAACCTGCGCCACCTCTCCGCCGCCATCGCCGTCGCCCCCAAGACCCCCTCCCCCATGAAGCAGAAGAGGCGTAGGATCATCGAGGCGGCGGTCGTGGCTCCCTCGCCTCCGAGGAGGTCTCGGCGCCTCGCTAATCTCCCTGAGGTCAAGTATGCAGAGGTAGCACCAGATGGCGCAGAGAGGATGAAAAGGTCTCCACGAAAAGCAATTGACAGTATCTACCTGGCAACCCGTGGATCAATTTCCATGGAAGCTAGGCTCGAGGCAGCAAGAAAAGCAGAGGAACTGGAATCACAACTTGACCCTGAATTTCCCTCCTTCGTGAAGCCAATGCTACATTCACATGTGGTCCGAGGATTTTGGTTGGGCTTACCGAGGCATTTCTGCGAGACTTACCTGCCAAAACATGATGCCATTGTCACTTTGTTGGATGAGAAAGACGAGCAATTTGATACCAATTACCTTGCCTACAAGAATGGCCTAAGTGGTGGCTGGGCTGGCTTTGCTTTGGACCATGGATTGTTGGATGGAGATGCGACAGTATTTCAGTTGGTCAAGCCTACAACCTTCAAGGTGCATATTATCCGAGCTACTGTTGATGATGGAAATGAGGTAACCAAGTGA
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| Protein seq | MGMGMEKGMTAYEAARERTVEENKRKMEALNLRHLSAAIAVAPKTPSPMKQKRRRIIEAAVVAPSPPRRSRRLANLPEVKYAEVAPDGAERMKRSPRKAIDSIYLATRGSISMEARLEAARKAEELESQLDPEFPSFVKPMLHSHVVRGFWLGLPRHFCETYLPKHDAIVTLLDEKDEQFDTNYLAYKNGLSGGWAGFALDHGLLDGDATVFQLVKPTTFKVHIIRATVDDGNEVTK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.925329 | 1.7920425 | 9.603658 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0184500 | RBH | 0.0 | 0.000000 | 1.523675 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g08620 | RBH | 0.0 | 0.000000 | 0.321185 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0184500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0006290 | RBH | 0.0 | 3.593048 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0006260 | RBH | 0.0 | 0.744562 | 0.267906 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0006270 | RBH | 0.0 | 4.665503 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0006260 | RBH | 0.0 | 0.123071 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0006210 | RBH | 0.0 | 3.622126 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0006140 | RBH | 0.0 | 0.336498 | 0.088529 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0072800 | RBH | 4.766065 | 0.129702 | 36.300825 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0006170 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0006220 | RBH | 0.0 | 8.450454 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0006180 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0006200 | RBH | 0.000000 | 0.583192 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0006190 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G006220 | RBH | 0.0 | 1.243084 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0006040 | RBH | 0.000000 | 5.519585 | 0.547075 |
| Os XI: R9311 | R9311 | AGIS | R9311C03g10500 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_03g0065600 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_03g0065200 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_03g0063300 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_03g0066500 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0304072800.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0310155200.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_005971 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0309324800.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0309830200.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0304499800.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0304079400.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0305380000.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0304483400.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0304535200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0304026200.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0304045600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0309605000.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0304058600.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0304070800.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0302797600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0304099400.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0304098200.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0304077200.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0305345400.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0304509800.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0312973000.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0305788200.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0304005200.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0304040200.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0304082400.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0304067400.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0305948600.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0304116200.01 | RBH | None | None | None |
