Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0512100 | OGI:02088650 | 48/50 | Minghui 63 | MH63RS3 | HZAU | Chr02:32664957-32667117 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_DEL0238640,02428_MH63RS3_DEL0235410,Lemont_MH63RS3_DEL0239210,128077_MH63RS3_DEL0237290,ZH11_MH63RS3_DEL0239590,DHX2_MH63RS3_DEL0239940,KY131_MH63RS3_DEL0238590,XL628S_MH63RS3_DEL0227220,Kosh_MH63RS3_DEL0240140,132278_MH63RS3_DEL0239880,117425_MH63RS3_DEL0240520,Azucena_MH63RS3_DEL0238230,Nipponbare_MH63RS3_DEL0238370,LJ_MH63RS3_DEL0239410,
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| DNA seq | ATGGACGAGATGAGGAGTAGTGACATAGAGAAGCAAGATGAAGTCATGCTACCTGGCTTCAGGTTTCATCCAACGGATGAAGAGCTCGTCAGATTCTACCTTAGAAGGAAAATCCAGCAGAAGTCTCTTCCCATTGAGCTCATCAGGCAGCTGGACATCTACAAGTATGATCCATGGGATCTCCCAAGTAAGATTTGTTACTTCCATTTTCATTCTTTTTTCCGTTCTCTGCACAGATAAATAAAGAACTATGAAGCCTTTCTCTTTCAAGATAACACTAATTATATGTTTCCTATTTTTACTTTATGACTTTCATGGTGCATGTTCCATCATGCTGAGACTTCGTATCTTAGTAGTAATAGTTTTTTCTTCTTTTTGCCACCATGTTGAAGTCGAACTCTAAACTTTTTGCATGCATCTTTATTTAGTTGTCTCTGAGGTTTTGATAAGGAAATAAGAAAAGTAACTACCTAAGAGTTTTCAACCTGCCTCTTAAGCGCTACTACTATAATGTCCATTCATCACGAAGCCCATGCAGTTTTAGGGTTAAGCCTCATAAAACATTTAGAGCAAGATTTGCAAGTCTACCAAGCTATTAATGTCATGATGTATTCTGAGATTTGGCTTTCAGTAGTGTTAATGTGGTATAATTGATTTACAAGTATCACAGTTGGGCTCTCAAGACTAAAAAGGCATGCGGATAGTAAATAGATTAGTTTTCATGTGATGCATATGCCTTTTATCAGTCAGACCAGTTAGCCTAGCTGACTAGCTCACGTTTTGTTTTAAGTCAGTGTTACACAATAGACACCATTTAACTTATTTCTAGTCATATTTACTTAACAAATCCTTTTTTCACCGTGAAGAGTTAGCAAGTACTGGAGAGAAGGAATGGTATTTCTACTGCCCAAGGGATAGGAAGTACCGGAACAGCACAAGGCCAAACAGGGTGACTGGAGCAGGTTTCTGGAAGGCCACTGGAACCGATAGGCCAATCTACTCCTCCGATGGATCAAAGTGCATAGGCTTGAAGAAGTCCCTTGTCTTCTACAAGGGCAGAGCAGCTAAAGGCGTCAAAACTGACTGGATGATGCACGAGTTCCGGCTGCCATCGCTCACTGACCCTTCATTGCCACAGAAGAAGCCACTCGAGAAGATCATTCCACCAAATGTAAGCAACTGGCATGCTGCAACATTTGATAACAAAAAACTTCAAACCTTAACACATATGCTACAAAAGTAGCTTAGGCATAGCTACCAAAACTGGCACTAAGGTAGATGATCTGAGCAATACATGTCTGCCCATAATTACAATGGGAAAACTTGCAATATAAACTGCAAAAGGCCTAGCATATGTAGTGCTTTCCGAGCTAATTCAGTATGACACCAACAATTTCATATACCATTTCCTTGTGAAGATAAGTTGAATGCACTTTTTACCTGAAAACACTGCCCTAATCTTATTCTTCTTTTTTCTTATCATGAGCAGGATTCCTGGGCAATCTGCAGGATTTTCAAGAAAACCAATTCCACGGCACAAAGAGCGCTCTCACACTCATGGGTATCTCCTCCCTTGTCCAGCACAAATGAAGCCTACACTGCCCCTGTCTCGCAGACCACACAGAGAAGTCAGCATATCTCAGATAACACATCATCAGTAATGACCGATGCCATCTCCTCCACCATCCAGTTCACCGGAAGTAGCTACTTGCCTTCAACAGTTCCTTCATGCCACAACCCACTCAGCATGATTGACAGCAACAGCAGGCCAGATGCATCTGTACCTCTATCCTCACCGGTTGCAGAGCATCAGACCATGGGTATCCTCTCAGCAATCCCACTTGATATTACAGCTGGGATTGACATTGCATCCATGGTTTTCAATGCATCATCCTTCACACTCCCAAACATGGATAGAATGACTGCAAACATAGAGTTTGGCCAACCACAGAAGTGCAACAGCAGCAGCAGCAGCATGACCAACAGATGTGTGGTCGACATGCCTGATGTTGCTAACAATATCAACAGCGGTCCACGGTCCATCAACTTCAACCTGCAAGGAACACTTTCTGATGACTGGAGAATGACCTTGCCATGGGAATCACTCCCTTGCACGACAGAAGTCTCAACAAATTTCCAGTCAACCAAGTGCTATACTTAG
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| CDS seq | ATGGACGAGATGAGGAGTAGTGACATAGAGAAGCAAGATGAAGTCATGCTACCTGGCTTCAGGTTTCATCCAACGGATGAAGAGCTCGTCAGATTCTACCTTAGAAGGAAAATCCAGCAGAAGTCTCTTCCCATTGAGCTCATCAGGCAGCTGGACATCTACAAGTATGATCCATGGGATCTCCCAAAGTTAGCAAGTACTGGAGAGAAGGAATGGTATTTCTACTGCCCAAGGGATAGGAAGTACCGGAACAGCACAAGGCCAAACAGGGTGACTGGAGCAGGTTTCTGGAAGGCCACTGGAACCGATAGGCCAATCTACTCCTCCGATGGATCAAAGTGCATAGGCTTGAAGAAGTCCCTTGTCTTCTACAAGGGCAGAGCAGCTAAAGGCGTCAAAACTGACTGGATGATGCACGAGTTCCGGCTGCCATCGCTCACTGACCCTTCATTGCCACAGAAGAAGCCACTCGAGAAGATCATTCCACCAAATGATTCCTGGGCAATCTGCAGGATTTTCAAGAAAACCAATTCCACGGCACAAAGAGCGCTCTCACACTCATGGGTATCTCCTCCCTTGTCCAGCACAAATGAAGCCTACACTGCCCCTGTCTCGCAGACCACACAGAGAAGTCAGCATATCTCAGATAACACATCATCAGTAATGACCGATGCCATCTCCTCCACCATCCAGTTCACCGGAAGTAGCTACTTGCCTTCAACAGTTCCTTCATGCCACAACCCACTCAGCATGATTGACAGCAACAGCAGGCCAGATGCATCTGTACCTCTATCCTCACCGGTTGCAGAGCATCAGACCATGGGTATCCTCTCAGCAATCCCACTTGATATTACAGCTGGGATTGACATTGCATCCATGGTTTTCAATGCATCATCCTTCACACTCCCAAACATGGATAGAATGACTGCAAACATAGAGTTTGGCCAACCACAGAAGTGCAACAGCAGCAGCAGCAGCATGACCAACAGATGTGTGGTCGACATGCCTGATGTTGCTAACAATATCAACAGCGGTCCACGGTCCATCAACTTCAACCTGCAAGGAACACTTTCTGATGACTGGAGAATGACCTTGCCATGGGAATCACTCCCTTGCACGACAGAAGTCTCAACAAATTTCCAGTCAACCAAGTGCTATACTTAG
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| Protein seq | MDEMRSSDIEKQDEVMLPGFRFHPTDEELVRFYLRRKIQQKSLPIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSDGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDPSLPQKKPLEKIIPPNDSWAICRIFKKTNSTAQRALSHSWVSPPLSSTNEAYTAPVSQTTQRSQHISDNTSSVMTDAISSTIQFTGSSYLPSTVPSCHNPLSMIDSNSRPDASVPLSSPVAEHQTMGILSAIPLDITAGIDIASMVFNASSFTLPNMDRMTANIEFGQPQKCNSSSSSMTNRCVVDMPDVANNINSGPRSINFNLQGTLSDDWRMTLPWESLPCTTEVSTNFQSTKCYT |
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| Function | Putative NAC domain-containing protein 94 [UniProtKB/Swiss-Prot:Q9FIW5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0512100 | OsMH63_02T0512100-mRNA-1 | Chr02 | 32664957 | 32667117 | + | maker | ||
| CDS seq | ATGGACGAGATGAGGAGTAGTGACATAGAGAAGCAAGATGAAGTCATGCTACCTGGCTTCAGGTTTCATCCAACGGATGAAGAGCTCGTCAGATTCTACCTTAGAAGGAAAATCCAGCAGAAGTCTCTTCCCATTGAGCTCATCAGGCAGCTGGACATCTACAAGTATGATCCATGGGATCTCCCAAAGTTAGCAAGTACTGGAGAGAAGGAATGGTATTTCTACTGCCCAAGGGATAGGAAGTACCGGAACAGCACAAGGCCAAACAGGGTGACTGGAGCAGGTTTCTGGAAGGCCACTGGAACCGATAGGCCAATCTACTCCTCCGATGGATCAAAGTGCATAGGCTTGAAGAAGTCCCTTGTCTTCTACAAGGGCAGAGCAGCTAAAGGCGTCAAAACTGACTGGATGATGCACGAGTTCCGGCTGCCATCGCTCACTGACCCTTCATTGCCACAGAAGAAGCCACTCGAGAAGATCATTCCACCAAATGATTCCTGGGCAATCTGCAGGATTTTCAAGAAAACCAATTCCACGGCACAAAGAGCGCTCTCACACTCATGGGTATCTCCTCCCTTGTCCAGCACAAATGAAGCCTACACTGCCCCTGTCTCGCAGACCACACAGAGAAGTCAGCATATCTCAGATAACACATCATCAGTAATGACCGATGCCATCTCCTCCACCATCCAGTTCACCGGAAGTAGCTACTTGCCTTCAACAGTTCCTTCATGCCACAACCCACTCAGCATGATTGACAGCAACAGCAGGCCAGATGCATCTGTACCTCTATCCTCACCGGTTGCAGAGCATCAGACCATGGGTATCCTCTCAGCAATCCCACTTGATATTACAGCTGGGATTGACATTGCATCCATGGTTTTCAATGCATCATCCTTCACACTCCCAAACATGGATAGAATGACTGCAAACATAGAGTTTGGCCAACCACAGAAGTGCAACAGCAGCAGCAGCAGCATGACCAACAGATGTGTGGTCGACATGCCTGATGTTGCTAACAATATCAACAGCGGTCCACGGTCCATCAACTTCAACCTGCAAGGAACACTTTCTGATGACTGGAGAATGACCTTGCCATGGGAATCACTCCCTTGCACGACAGAAGTCTCAACAAATTTCCAGTCAACCAAGTGCTATACTTAG
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| Protein seq | MDEMRSSDIEKQDEVMLPGFRFHPTDEELVRFYLRRKIQQKSLPIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSDGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDPSLPQKKPLEKIIPPNDSWAICRIFKKTNSTAQRALSHSWVSPPLSSTNEAYTAPVSQTTQRSQHISDNTSSVMTDAISSTIQFTGSSYLPSTVPSCHNPLSMIDSNSRPDASVPLSSPVAEHQTMGILSAIPLDITAGIDIASMVFNASSFTLPNMDRMTANIEFGQPQKCNSSSSSMTNRCVVDMPDVANNINSGPRSINFNLQGTLSDDWRMTLPWESLPCTTEVSTNFQSTKCYT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.5213885 | 2.9082555 | 0.6467635 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0745300 | RBH | 0.000000 | 0.000000 | 0.851600 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42970 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0745300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0033520 | RBH | 0.000000 | 2.080990 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0033610 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0033520 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0033100 | RBH | 0.033619 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0033210 | RBH | 1.229155 | 0.000000 | 0.376243 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0033000 | RBH | 0.000000 | 0.199169 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0541400 | RBH | 0.3681955 | 1.022815 | 2.001655 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0033280 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0033060 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0033400 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0033250 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0032870 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G033560 | RBH | 0.000000 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0033290 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Os XI: R9311 | R9311 | AGIS | R9311C02g09122 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_02g0374500 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_02g0380300 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_02g0355300 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_02g0375800 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0203516500.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0209316300.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_013724 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0208627300.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0208187300.01 | SBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0203980300.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0203522900.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0203873900.01 | SBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0203901900.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0203958900.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0203471300.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0203484100.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0208780900.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0203502500.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0203511500.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0202175900.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0203539900.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0203538500.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0203523700.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0204765100.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0204044500.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0212094900.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0204974700.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0203446500.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0203483700.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0203525500.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0203509900.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0203782900.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0203557500.01 | RBH | None | None | None |
