Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_02g0033100 | OGI:02088650 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr02:31190324-31192627 | ||||||||
| Gene Symbol | NAC52, ONAC052, ONAC52, - | ||||||||||
| DNA seq | TTGTTAGCTCGTAAGGTCTTGATAACCAGAAGTAGGTGAGAGTGAGCACCGTTTGAGCTAGCTAGTTACCATCCACCAGTAGTTTCTGTACTGTGTTGATATGGACGAGATGAGGAGTAGTGACATAGAGAAGCAAGATGAAGTCATGCTACCTGGCTTCAGGTTTCATCCAACGGATGAAGAGCTCGTCAGATTCTACCTTAGAAGGAAAATCCAGCAGAAGTCTCTTCCCATTGAGCTCATCAGGCAGCTGGACATCTACAAGTATGATCCATGGGATCTCCCAAGTAAGATTTGTTACTTCCATTTTCATTCTTTTTTCCGTTCTCTGCACAGATAAATAAAGAACTATGAAGCCTTTCTCTTTCAAGATAACACTAATTATATGTTTCCTATTTTTACTTTATGACTTTCATGGTGCATGTTCCATCATGTTTCCTATTTTTACTTTATGACTTTCATGGTGCATGTTCCATCATGCTGAGACTTCGTATCTTAGTAGTAATAGTTTTTTCTTCTTTTTGCCACCATGTTGAAGTCGAACTCTAAACTTTTTGCATGCATCTTTATTTAGTTGTCTCTGAGGTTTTGATAAGGAAATAAGAAAAGTAACTACCTAAGAGTTTTCAACCTGCCTCTTAAGCGCTACTACTATAATGTCCATTCATCACGAAGCCCATGCAGTTTTAGGGTTAAGCCTCATAAAACATTTAGAGCAAGATTTGCAAGTCTACCAAGCTATTAATGTCATGATGTATTCTGAGATTTGGCTTTCAGTAGTGTTAATGTGGTATAATTGATTTACAAGTATCACAGTTGGGCTCTCAAGACTAAAAAGGCATGCGGATAGTAAATAGATTATTTTTCATGTGATGCATATGCCTTTTATCAGTCAGACCAGTTAGCCTAGCTGACTAGCTCACGTTTTGTTTTAAGTCAGTGTTACACAATAGACACCATTTAACTTATTTCTAGTCATATTTACTTAACAAATCCTTTTTTCACCGTGAAGAGTTAGCAAGTACTGGAGAGAAGGAATGGTATTTCTACTGCCCAAGGGATAGGAAGTACCGGAACAGCACAAGGCCAAACAGGGTGACTGGAGCAGGTTTCTGGAAGGCCACTGGAACCGATAGGCCAATCTACTCCTCCGATGGATCAAAGTGCATAGGCTTGAAGAAGTCCCTTGTCTTCTACAAGGGCAGAGCAGCTAAAGGCGTCAAAACTGACTGGATGATGCACGAGTTCCGGCTGCCATCGCTCACTGACCCTTCATTGCCACAGAAGAAGCCACTCGAGAAGATCATTCCACCAAATGTAAGCAACTGGCATGCTGCAACATTTGAAAACAAAAAACTTCAAACCTTAACACATATGCTACAAAAGTAGCTTAGGCATAGCTACCAAAACTGGCACTAAGGTAGATGATCTGAGCAATACATGTCTGCCCATAATTACAATGGGAAAACTTGCAATATAAACTGCAAAAGGCCTAGCATATGTAGTGCTTTCCGAGCTAATTCAGTATGACACCAACAATTTCATATACCATTTCCTTGTGAAGATAAGTTGAATGCACTTTTTACCTGAAAACACTGCCCTAATCTTATTCTTCTTTTTTCTTATCATGAGCAGGATTCCTGGGCAATCTGCAGGATTTTCAAGAAAACCAATTCCACGGCACAAAGAGCGCTCTCACACTCATGGGTATCTCCTCCCTTGTCCAGCACAAATGAAGCCTACACTGCCCCTGTCTCGCAGACCACACAGAGAAGTCAGCATACCTCAGATAACACATCATCAGTAATGACCGATGCCATCTCCTCCACCATCCAGTTCACCGGAAGTAGCTACTTGCCTTCAACAGTTCCTTCATGCCACAACCCACTCAGCATGATTGACAGCAACAGCAGGCCAGATGCATCTGTACCTCTACCCTCACCGGTTGCAGAGCATCAGACCATGGGTATCCTCTCAGCAATCCCACTTGATATTACAGCTGGGATTGACATTGCATCCATGGTTTTCAATGCATCATCCTTCACACTCCCAAACATGGATAGAATGACTGCAAACATAGAGTTTGGCCAACCACAGAAGTGCAACAGCAGCAGCAGCATGACCAACAGATGTGTGGTCGACATGCCTGATGTTGCTAACAATATCAACAGCGGTCCACGGTCCATCAACTTCAACCTGCAAGGAACACTTTCTGATGACTGGAGAATGACCTTGCCATGGGAATCACTCCCTTGCACGACAGAAGTCTCAACAAATTTCCAGTCAACCAAGTGCTATACTTAG
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| CDS seq | ATGGACGAGATGAGGAGTAGTGACATAGAGAAGCAAGATGAAGTCATGCTACCTGGCTTCAGGTTTCATCCAACGGATGAAGAGCTCGTCAGATTCTACCTTAGAAGGAAAATCCAGCAGAAGTCTCTTCCCATTGAGCTCATCAGGCAGCTGGACATCTACAAGTATGATCCATGGGATCTCCCAAAGTTAGCAAGTACTGGAGAGAAGGAATGGTATTTCTACTGCCCAAGGGATAGGAAGTACCGGAACAGCACAAGGCCAAACAGGGTGACTGGAGCAGGTTTCTGGAAGGCCACTGGAACCGATAGGCCAATCTACTCCTCCGATGGATCAAAGTGCATAGGCTTGAAGAAGTCCCTTGTCTTCTACAAGGGCAGAGCAGCTAAAGGCGTCAAAACTGACTGGATGATGCACGAGTTCCGGCTGCCATCGCTCACTGACCCTTCATTGCCACAGAAGAAGCCACTCGAGAAGATCATTCCACCAAATGATTCCTGGGCAATCTGCAGGATTTTCAAGAAAACCAATTCCACGGCACAAAGAGCGCTCTCACACTCATGGGTATCTCCTCCCTTGTCCAGCACAAATGAAGCCTACACTGCCCCTGTCTCGCAGACCACACAGAGAAGTCAGCATACCTCAGATAACACATCATCAGTAATGACCGATGCCATCTCCTCCACCATCCAGTTCACCGGAAGTAGCTACTTGCCTTCAACAGTTCCTTCATGCCACAACCCACTCAGCATGATTGACAGCAACAGCAGGCCAGATGCATCTGTACCTCTACCCTCACCGGTTGCAGAGCATCAGACCATGGGTATCCTCTCAGCAATCCCACTTGATATTACAGCTGGGATTGACATTGCATCCATGGTTTTCAATGCATCATCCTTCACACTCCCAAACATGGATAGAATGACTGCAAACATAGAGTTTGGCCAACCACAGAAGTGCAACAGCAGCAGCAGCATGACCAACAGATGTGTGGTCGACATGCCTGATGTTGCTAACAATATCAACAGCGGTCCACGGTCCATCAACTTCAACCTGCAAGGAACACTTTCTGATGACTGGAGAATGACCTTGCCATGGGAATCACTCCCTTGCACGACAGAAGTCTCAACAAATTTCCAGTCAACCAAGTGCTATACTTAG
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| Protein seq | MDEMRSSDIEKQDEVMLPGFRFHPTDEELVRFYLRRKIQQKSLPIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSDGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDPSLPQKKPLEKIIPPNDSWAICRIFKKTNSTAQRALSHSWVSPPLSSTNEAYTAPVSQTTQRSQHTSDNTSSVMTDAISSTIQFTGSSYLPSTVPSCHNPLSMIDSNSRPDASVPLPSPVAEHQTMGILSAIPLDITAGIDIASMVFNASSFTLPNMDRMTANIEFGQPQKCNSSSSMTNRCVVDMPDVANNINSGPRSINFNLQGTLSDDWRMTLPWESLPCTTEVSTNFQSTKCYT |
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| Function | Putative NAC domain-containing protein 94 [UniProtKB/Swiss-Prot:Q9FIW5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_02g0033100 | OsARC_02g0033100.01 | Chr02 | 31190324 | 31192627 | + | NAM | ||
| CDS seq | ATGGACGAGATGAGGAGTAGTGACATAGAGAAGCAAGATGAAGTCATGCTACCTGGCTTCAGGTTTCATCCAACGGATGAAGAGCTCGTCAGATTCTACCTTAGAAGGAAAATCCAGCAGAAGTCTCTTCCCATTGAGCTCATCAGGCAGCTGGACATCTACAAGTATGATCCATGGGATCTCCCAAAGTTAGCAAGTACTGGAGAGAAGGAATGGTATTTCTACTGCCCAAGGGATAGGAAGTACCGGAACAGCACAAGGCCAAACAGGGTGACTGGAGCAGGTTTCTGGAAGGCCACTGGAACCGATAGGCCAATCTACTCCTCCGATGGATCAAAGTGCATAGGCTTGAAGAAGTCCCTTGTCTTCTACAAGGGCAGAGCAGCTAAAGGCGTCAAAACTGACTGGATGATGCACGAGTTCCGGCTGCCATCGCTCACTGACCCTTCATTGCCACAGAAGAAGCCACTCGAGAAGATCATTCCACCAAATGATTCCTGGGCAATCTGCAGGATTTTCAAGAAAACCAATTCCACGGCACAAAGAGCGCTCTCACACTCATGGGTATCTCCTCCCTTGTCCAGCACAAATGAAGCCTACACTGCCCCTGTCTCGCAGACCACACAGAGAAGTCAGCATACCTCAGATAACACATCATCAGTAATGACCGATGCCATCTCCTCCACCATCCAGTTCACCGGAAGTAGCTACTTGCCTTCAACAGTTCCTTCATGCCACAACCCACTCAGCATGATTGACAGCAACAGCAGGCCAGATGCATCTGTACCTCTACCCTCACCGGTTGCAGAGCATCAGACCATGGGTATCCTCTCAGCAATCCCACTTGATATTACAGCTGGGATTGACATTGCATCCATGGTTTTCAATGCATCATCCTTCACACTCCCAAACATGGATAGAATGACTGCAAACATAGAGTTTGGCCAACCACAGAAGTGCAACAGCAGCAGCAGCATGACCAACAGATGTGTGGTCGACATGCCTGATGTTGCTAACAATATCAACAGCGGTCCACGGTCCATCAACTTCAACCTGCAAGGAACACTTTCTGATGACTGGAGAATGACCTTGCCATGGGAATCACTCCCTTGCACGACAGAAGTCTCAACAAATTTCCAGTCAACCAAGTGCTATACTTAG
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| Protein seq | MDEMRSSDIEKQDEVMLPGFRFHPTDEELVRFYLRRKIQQKSLPIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSDGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDPSLPQKKPLEKIIPPNDSWAICRIFKKTNSTAQRALSHSWVSPPLSSTNEAYTAPVSQTTQRSQHTSDNTSSVMTDAISSTIQFTGSSYLPSTVPSCHNPLSMIDSNSRPDASVPLPSPVAEHQTMGILSAIPLDITAGIDIASMVFNASSFTLPNMDRMTANIEFGQPQKCNSSSSMTNRCVVDMPDVANNINSGPRSINFNLQGTLSDDWRMTLPWESLPCTTEVSTNFQSTKCYT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.033619 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0745300 | RBH | 0.000000 | 0.000000 | 0.851600 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42970 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0745300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0033520 | RBH | 0.000000 | 2.080990 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0033610 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0033520 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0033210 | RBH | 1.229155 | 0.000000 | 0.376243 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0512100 | RBH | 0.5213885 | 2.9082555 | 0.6467635 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0033000 | RBH | 0.000000 | 0.199169 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0541400 | RBH | 0.3681955 | 1.022815 | 2.001655 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0033280 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0033060 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0033400 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0033250 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0032870 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G033560 | RBH | 0.000000 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0033290 | RBH | 0.000000 | 0.000000 | 0.000000 |
