Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0322700 | OGI:02056360 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr02:20834298-20835473 | ||||||||
| Gene Symbol | SAP5,OsSAP5 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | GGCCGGCTTTAGCTGCGCTGCGCTGCGTCGCTCGATTTGTTTGTCGTACCGTTGTCGCGATCCCTTCCCGTTCCTTGAAACCAAAGCCAAATCGATCCCTCCCTCCCGTCTCCGCCTTTCGGCCGCCTCACGCCTCCCCTTTTTAACCCCTTCCCCGGCCGCCTCCCTCCGGCCCCTTGCCTCCACCCACGTCGTCGATCTCGTCCACTCCAATTACATCCATCCATCCGCTCTGCAACCTTCTCCGGTTGCTGCGAGCGAGAGCGAGAGCGATCGCTACAGCCGCCGGTGGCCAGCCATGGCTGAGGAGCAGAGGTGGCAGGAGGGCTGCCACCGCCTGTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCCGCCACGCTCGACCTCTGCTCCAAGTGCTACCGCGACCGCCAAGGCCGGGAGAGTACTGCACCCGTCGTCGTCGCCGCCGCAGCCTCGGCCTGCCCGGCTACTCATCCTTCCTCGCCATCCTCGTCGTCTTGTCCGGCGTTCTTGCCTTCCTCCACTGCCGCCGAGGCTGGCGTCGTCGTCGCGGCGGTGGCGAAGGCGAGCAGGTGCGCGAGCTGTAGGAAGCGGGTGGGGCTTACGGGGTTCGCGTGCCGGTGCGGCGGCACGTTCTGCGGCGCACACCGGTACCCGGAGCGGCACGCGTGCGGCTTCGACTTCAAGGCCGCCGGCCGCGACGCCATCGCGCGCGCCAACCCGCTCATCAAGGGCGACAAGCTCAAGGACAAGATCTGATCCCTCCCCACCTGCCGTGCTCCCCGTCGCCGCCGGAAGAACGCGCGGTTGGATTCCAAATTAAATACGCTTATTATTATGTAAGCTACAGCCGGCCGGCGGTGAAATCGCCAGCCAGCCATGCATGCATGCGACTGAAATGAAAATGAGTTCATATCTCTGCTCCTTCTATTCAGAGCCGATTGCCCGATTGCCAAATGCCAACTCGAAATTGGAAATGAAATCGACTGCGAACGCGATGAACTCAGAATAGGTCAGGTAGATTAGATTACAGCGCACCGTGACCAAACCCGAACCGAACATTGGAAAATTTGATGTACGATTATACTACGAGATTAGTTTATGAAGGCAGCGGTAGTTTTCTTTGAGGGCGAACAAGTCGCAGGATTAGTTGGTCGATGACAACATTTCGA
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| CDS seq | ATGGCTGAGGAGCAGAGGTGGCAGGAGGGCTGCCACCGCCTGTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCCGCCACGCTCGACCTCTGCTCCAAGTGCTACCGCGACCGCCAAGGCCGGGAGAGTACTGCACCCGTCGTCGTCGCCGCCGCAGCCTCGGCCTGCCCGGCTACTCATCCTTCCTCGCCATCCTCGTCGTCTTGTCCGGCGTTCTTGCCTTCCTCCACTGCCGCCGAGGCTGGCGTCGTCGTCGCGGCGGTGGCGAAGGCGAGCAGGTGCGCGAGCTGTAGGAAGCGGGTGGGGCTTACGGGGTTCGCGTGCCGGTGCGGCGGCACGTTCTGCGGCGCACACCGGTACCCGGAGCGGCACGCGTGCGGCTTCGACTTCAAGGCCGCCGGCCGCGACGCCATCGCGCGCGCCAACCCGCTCATCAAGGGCGACAAGCTCAAGGACAAGATCTGA
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| Protein seq | MAEEQRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFLPSSTAAEAGVVVAAVAKASRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLKDKI |
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| Function | Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [UniProtKB/Swiss-Prot:Q6H754] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0322700 | OsMH63_02T0322700.1 | Chr02 | 20834298 | 20835473 | + | maker | ||
| CDS seq | ATGGCTGAGGAGCAGAGGTGGCAGGAGGGCTGCCACCGCCTGTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCCGCCACGCTCGACCTCTGCTCCAAGTGCTACCGCGACCGCCAAGGCCGGGAGAGTACTGCACCCGTCGTCGTCGCCGCCGCAGCCTCGGCCTGCCCGGCTACTCATCCTTCCTCGCCATCCTCGTCGTCTTGTCCGGCGTTCTTGCCTTCCTCCACTGCCGCCGAGGCTGGCGTCGTCGTCGCGGCGGTGGCGAAGGCGAGCAGGTGCGCGAGCTGTAGGAAGCGGGTGGGGCTTACGGGGTTCGCGTGCCGGTGCGGCGGCACGTTCTGCGGCGCACACCGGTACCCGGAGCGGCACGCGTGCGGCTTCGACTTCAAGGCCGCCGGCCGCGACGCCATCGCGCGCGCCAACCCGCTCATCAAGGGCGACAAGCTCAAGGACAAGATCTGA
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| Protein seq | MAEEQRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFLPSSTAAEAGVVVAAVAKASRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLKDKI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.4844145 | 6.447855 | 18.8552525 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0530300 | RBH | 0.328592 | 0.252176 | 0.795141 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g32840 | RBH | 0.216386 | 0.165164 | 0.199319 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0530300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0019770 | RBH | 0.0 | 3.494182 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0019880 | RBH | 0.0 | 2.856325 | 0.423693 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0019820 | RBH | 0.0 | 0.0 | 1.765023 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0019610 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0019540 | RBH | 0.0 | 0.0 | 5.918140 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0019250 | RBH | 0.0 | 0.642447 | 0.329092 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0342700 | RBH | 2.995925 | 21.952464 | 2.019514 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0019780 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0019520 | RBH | 0.0 | 8.026788 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0019930 | RBH | 0.0 | 8.430231 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0019660 | RBH | 0.0 | 1.127157 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0019440 | RBH | 0.0 | 7.405437 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G019890 | RBH | 0.000000 | 0.0 | 0.470618 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0019610 | RBH | 0.0 | 5.277768 | 0.298424 |
| Os XI: R9311 | R9311 | AGIS | R9311C02g07606 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_02g0216100 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_02g0218400 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_02g0210200 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_02g0217900 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0202788900.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0208017500.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_012218 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0207400900.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0207589300.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0203183300.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0202794900.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0203355900.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0203113500.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0203197300.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0202767700.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0202753500.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0207576300.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0202761300.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0202789700.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0201825300.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0202806500.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0202818100.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0202806700.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0203987700.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0203693700.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0210845300.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0203776700.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0202735700.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0202742500.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0202782500.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0202765500.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0202585900.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0202830300.01 | RBH | None | None | None |
