Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0091900 | OGI:02016210 | 22/50 | Minghui 63 | MH63RS3 | HZAU | Chr02:5532096-5533677 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_INS0205210,Lemont_MH63RS3_INS0205170,Lemont_MH63RS3_DEL0205180,128077_MH63RS3_INS0205020,Y3551_MH63RS3_INS0200810,Y3551_MH63RS3_DEL0200820,ZH11_MH63RS3_INS0205450,DHX2_MH63RS3_INS0205130,KY131_MH63RS3_INS0205290,Kosh_MH63RS3_INS0205500,132424_MH63RS3_INS0203390,132424_MH63RS3_DEL0203400,R498_MH63RS3_INS0203230,R498_MH63RS3_DEL0203240,117534_MH63RS3_INS0204270,117534_MH63RS3_DEL0204280,132278_MH63RS3_INS0204920,117425_MH63RS3_INS0205190,117425_MH63RS3_DEL0205200,Azucena_MH63RS3_INS0205230,Nipponbare_MH63RS3_INS0205130,127742_MH63RS3_INS0203890,127742_MH63RS3_DEL0203900,LJ_MH63RS3_INS0205540,
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| DNA seq | CTCCATTCATCTGACTTTGACGAGATTGGGCCCTTTTTTGCCATGGCTGTGAATGAGAACCGCAGAATCCTTGTTCGAGAAAGAGAGTAAAATCGATACATCATATGCACAGACCAGCCAGCTGTCGATCGGCAAATGGCCCGATCCACAAACTTCAATCCGAGCAAGCACACCCGTCCTTGGAAAATGACTCCTCCTAATTACATGCAAATCACCATGCTTTATTAATTACTAATTACATGCTTTAAACGTAATTAGCGCGCATGCAACAAACGAAGAGATCGAAGCAAAGTGATGGATGATCGATCACTCGAGGGGATCGCCGCCGTCGGCCTTGTGCACGGTGACGCTGAGCACGTGGTCGCCGTCGCCGTCGTCGACGTCGCCGGCGCCGGAGCCGGCGGAGCGGAGCGCGCGGAAGAAGCAGGTGTCGCCGACGGCGAGGCCGTTGTCGGCGCAGAACCGGTGCCAGCCGTACCGGAGCACCGCGCGCTCGCGGCGCGGCCGCCTGCCCTTGGTGTGCTTCAGCCTCACCGTCCACGACCTCCCCCGCATCCGCAGCACCACCTTCTCCCGCGCCGCGTACCCGTGCGCCTCCTGGAACTCTACCGGCACGTTCTGCTCCGCCGCCGCCGCCGCCATCGCCGCCGGTGACCGGCGCCCGGTTGGTTGGTTAGTTAGCTAGCTAGCCAGCCAGTTGGCAAAACAACAAACAGCTGGTGGGCGAGGGCGGATCGTGGAGCTCACCAGGTACTGTGCCTGCTTCTTCCCCAGGTTGCCCTGCCGCAGCGTCACCACGAACTGCGACGTCGCCGCCGCCTCACCGCGGCCGTCGTTGCCGTCGTCGTCGCTGCTGCTTCCGCTGCCTGCACATGTCAGCCATGTCATGTCAGGGCGAGCGAGCGAGGCGCGCGCCGCGCGGCGAGGTTATGTTACCGGCGGCGTCGTGGTAGGCACGGCGGCACATGGTCCCGTCGTCGAAGACGGTGACGGTGAACGCGGCGGCGCCGTCGTAGCGGAAGACGAGGAGGTCCCCGTCGCGCAGGCCATGGGCACGGGCGAACCGCAGCCAGCCGCGGCCCAGGTACGCGCCGCCGTCGTCGGCGACCACCTTCACGTCCCACATGCGGCCGCGCCGCCGCCGCCCCACGCCTGCGACCAGCAGCTTCGCGTCCCGGAGCTCTCGCTCCTCCCCCTCCAGCTCCCTCGCGAACTCGTCAGGCAGCTTCTGCATCGACATCACCATGGATCGATCAAACACTAGCAGCAGCAAAGCTACAAGAAACCAAAACACACACGAAAAGAAAAGAAAGAATCGATAAAAAAAAAGTTTTACCAGTTTGGTTCTGGAGGATCCGGGCTGGATGATCGTGAAGAACTCGAAGTTCGCCAAGCGAAGATTACTCATCTGCTCCTCCATCTTTGAGATTGATCGAGAGGTTTAGCAACAACAATAAGACAGTGGAAGGCAACTCGATCAAAATGGTGGCATAGGGTGGGTGTGCTGAACAAAGCGCCTGATCATCTCATGCCTCCTACGAAGTTCACTTCGTGAAATGAAGTGAAGAAGAAGAAGAAGAAG
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| CDS seq | ATGGAGGAGCAGATGAGTAATCTTCGCTTGGCGAACTTCGAGTTCTTCACGATCATCCAGCCCGGATCCTCCAGAACCAAACTGAAGCTGCCTGACGAGTTCGCGAGGGAGCTGGAGGGGGAGGAGCGAGAGCTCCGGGACGCGAAGCTGCTGGTCGCAGGCGTGGGGCGGCGGCGGCGCGGCCGCATGTGGGACGTGAAGGTGGTCGCCGACGACGGCGGCGCGTACCTGGGCCGCGGCTGGCTGCGGTTCGCCCGTGCCCATGGCCTGCGCGACGGGGACCTCCTCGTCTTCCGCTACGACGGCGCCGCCGCGTTCACCGTCACCGTCTTCGACGACGGGACCATGTGCCGCCGTGCCTACCACGACGCCGCCGGCAGCGGAAGCAGCAGCGACGACGACGGCAACGACGGCCGCGGTGAGGCGGCGGCGACGTCGCAGTTCGTGGTGACGCTGCGGCAGGGCAACCTGGGGAAGAAGCAGGCACAGTACCTGAACGTGCCGGTAGAGTTCCAGGAGGCGCACGGGTACGCGGCGCGGGAGAAGGTGGTGCTGCGGATGCGGGGGAGGTCGTGGACGGTGAGGCTGAAGCACACCAAGGGCAGGCGGCCGCGCCGCGAGCGCGCGGTGCTCCGGTACGGCTGGCACCGGTTCTGCGCCGACAACGGCCTCGCCGTCGGCGACACCTGCTTCTTCCGCGCGCTCCGCTCCGCCGGCTCCGGCGCCGGCGACGTCGACGACGGCGACGGCGACCACGTGCTCAGCGTCACCGTGCACAAGGCCGACGGCGGCGATCCCCTCGAGTGA
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| Protein seq | MEEQMSNLRLANFEFFTIIQPGSSRTKLKLPDEFARELEGEERELRDAKLLVAGVGRRRRGRMWDVKVVADDGGAYLGRGWLRFARAHGLRDGDLLVFRYDGAAAFTVTVFDDGTMCRRAYHDAAGSGSSSDDDGNDGRGEAAATSQFVVTLRQGNLGKKQAQYLNVPVEFQEAHGYAAREKVVLRMRGRSWTVRLKHTKGRRPRRERAVLRYGWHRFCADNGLAVGDTCFFRALRSAGSGAGDVDDGDGDHVLSVTVHKADGGDPLE |
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| Function | B3 domain-containing protein Os03g0212300 [UniProtKB/Swiss-Prot:Q10Q26] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0091900 | OsMH63_02T0091900.1 | Chr02 | 5532096 | 5533677 | - | maker | ||
| CDS seq | ATGGAGGAGCAGATGAGTAATCTTCGCTTGGCGAACTTCGAGTTCTTCACGATCATCCAGCCCGGATCCTCCAGAACCAAACTGAAGCTGCCTGACGAGTTCGCGAGGGAGCTGGAGGGGGAGGAGCGAGAGCTCCGGGACGCGAAGCTGCTGGTCGCAGGCGTGGGGCGGCGGCGGCGCGGCCGCATGTGGGACGTGAAGGTGGTCGCCGACGACGGCGGCGCGTACCTGGGCCGCGGCTGGCTGCGGTTCGCCCGTGCCCATGGCCTGCGCGACGGGGACCTCCTCGTCTTCCGCTACGACGGCGCCGCCGCGTTCACCGTCACCGTCTTCGACGACGGGACCATGTGCCGCCGTGCCTACCACGACGCCGCCGGCAGCGGAAGCAGCAGCGACGACGACGGCAACGACGGCCGCGGTGAGGCGGCGGCGACGTCGCAGTTCGTGGTGACGCTGCGGCAGGGCAACCTGGGGAAGAAGCAGGCACAGTACCTGAACGTGCCGGTAGAGTTCCAGGAGGCGCACGGGTACGCGGCGCGGGAGAAGGTGGTGCTGCGGATGCGGGGGAGGTCGTGGACGGTGAGGCTGAAGCACACCAAGGGCAGGCGGCCGCGCCGCGAGCGCGCGGTGCTCCGGTACGGCTGGCACCGGTTCTGCGCCGACAACGGCCTCGCCGTCGGCGACACCTGCTTCTTCCGCGCGCTCCGCTCCGCCGGCTCCGGCGCCGGCGACGTCGACGACGGCGACGGCGACCACGTGCTCAGCGTCACCGTGCACAAGGCCGACGGCGGCGATCCCCTCGAGTGA
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| Protein seq | MEEQMSNLRLANFEFFTIIQPGSSRTKLKLPDEFARELEGEERELRDAKLLVAGVGRRRRGRMWDVKVVADDGGAYLGRGWLRFARAHGLRDGDLLVFRYDGAAAFTVTVFDDGTMCRRAYHDAAGSGSSSDDDGNDGRGEAAATSQFVVTLRQGNLGKKQAQYLNVPVEFQEAHGYAAREKVVLRMRGRSWTVRLKHTKGRRPRRERAVLRYGWHRFCADNGLAVGDTCFFRALRSAGSGAGDVDDGDGDHVLSVTVHKADGGDPLE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0493675 | 0.027048 | 0.984465 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0197750 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g10420 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0197750 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0007420 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0007570 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0007350 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0007310 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0007380 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0007320 | RBH | 0.0 | 0.0 | 0.167150 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0095100 | RBH | 0.0626215 | 0 | 2.1535875 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0007730 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0007340 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0007630 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0007620 | RBH | 0.0 | 0.0 | 1.233605 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0007380 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G007480 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0007480 | RBH | 0.0 | 0.0 | 2.336057 |
| Os XI: R9311 | R9311 | AGIS | R9311C02g06287 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_02g0074400 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_02g0075600 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_02g0075600 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_02g0075400 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | NA | NA | NA | NA | NA |
| Os cB: Basmati1 | Basmati1 | SICAU | NA | NA | NA | NA | NA |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_010789 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: D62 | D62 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: DG | DG | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: DHX2 | DHX2 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: FH838 | FH838 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: FS32 | FS32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: G46 | G46 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: G630 | G630 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: G8 | G8 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: II32 | II32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: J4155 | J4155 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: Kosh | Kosh | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-trp: Lemont | Lemont | SICAU | NA | NA | NA | NA | NA |
| Os GJ-adm: LJ | LJ | SICAU | NA | NA | NA | NA | NA |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R498 | R498 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | NA | NA | NA | NA | NA |
| Os XI-2: TM | TM | SICAU | NA | NA | NA | NA | NA |
| Os XI-3: Tumba | Tumba | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: WSSM | WSSM | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y3551 | Y3551 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y58S | Y58S | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: YX1 | YX1 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: ZH11 | ZH11 | SICAU | NA | NA | NA | NA | NA |
