Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0521000 | OGI:01094760 | 49/50 | Minghui 63 | MH63RS3 | HZAU | Chr01:33258193-33259834 | ||||||||
| Gene Symbol | OsOFP05,OsOFP22 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
||||||||||
| DNA seq | AAACCCTCCCCACTTTAAAAGCGTTGCAACTCCCTCGTCTCTCCTCACACTCCAAGGTCACTCACACACACGGGCAGACACTCCAAGAACCTGGTGCCTGGTGGTAGCAAGCGAGCCATGAAGTGGGGGCTTAGAAGTAGTAGACACAACCAGAGAGAGAAGCAGCAGCGCACACAAGAGGAAGAGCACAAGCACGAGCAGCAAGAGGACAAGGGCAACAAGAGCAGGGCGGCCTTCCTGTCCTTCTCGCCGCTCGCGTGGCTCTCGAAGCTCACGGCCAAGAACAATGCTGCTGCCGCTAAACCGAAGCCTGCCGCGCCGGCCGACAAGAGCGCCGTCGCCGCCACTGGCGGATTCCCTTCTTGCTTCTTCAAGGCCTCGAGCTCGAGCACGAGCACGAGCGTGAGCTTGAGCTCGAGCGCGGCGTCGCAGAGCAGCCTGGCGGATTCCTCGCCCGCTGACCACCAGGCGCCGCGCCGCCTCTCGGTTGGCAACGACGGCGACACCGCCGAGGCTGCGGCCGCGCGGCAGCTGTACCACCGCCGCCGCCATTACTCGGTCGGCGGCGACCGGGACCTCCAAACCCTCCGCAACCTCATCCCGTTCTCCCGGGCCGCTTCTCCGATCCCGGTGCCTGCTCCGTTCGTCCCGGCGCTGAAGACGACGCCGCCGCCGCTGCCGTCCGACACGGACGAGGAGAAGCGGCCGCGGAGCCGCCGGCGCCGGCGCCGCAGCGGCGGCGGCGGGCGGCGGTCGTTCTCCGGGAGGACCCCGGGCGCGCGGGTGGCTGCCACCGTGCGCGTGCGGTCCCCGCATCGCGTGGCGTCGGCGGCGGCGGCGGCGGTGTCGGAGCTGGAGCGGTTCGCGGTGGTGCGCCGGACGAGCGACCCGCAGCGGGAGTTCCGCGCGTCGATGGTGGAGATGATCGCGAGCAAGCGCATCGGCCGGCCGGAAGAGCTGGAGACGCTCCTGGCGTGCTACCTCTCGCTCAACGCCGACGAGCACCACGACTGCATCGTCAAGGTGTTCCGGCAGGTCTGGTTCGAGCTCAACCCCGCCCGCGTCGCCGCCGTTGCGCCGCCGCGCAGCTGATGATACGTTCTTCTTCCTCGGCACCATGGAGCATCGGAGCGTGCTTGCCTAGCTAGTTGACGTGGATGCTGCTGATTCCAATCATTTGCTCCATTCGAAGCGGACGTGCCTACGTGGATCTTTGCACGCGTGGCTGCTAAAAGCTGTGTCACGCAGTAGAGTGCGCACGCTTTGAGGTGCGCATTGGATGCTGGCGTGTAAAGCTCGAGCTTATTATACTCTTGCTGTTTGTAATGGTGCTTTTGTTATGTAAGCTAGAGAAATGCATGGGGCAACGCTGGCTAGTTTTATCTCCACAAGGCTCCAGCACAATAATTTGGCGGTTTATCTGGCGAAAGATTCCAAATTTCCCAGTTTCCAGAATTCAAATGGCTCCAGGGTGCAGGACTGCATGGTTGTCTGACTTCTACTCAGAGAAACGCTTTTTGTGAGGGGGTTTTTGTCGTGTGCTCTGAATTTGATTTTGGGGTCGTCTGGATTGCTTCTATGGAAGTGAACGGAAGATTAATGACGAAATGATTTTTGGATCTGACTGTTTATATGTTCGCAG
More
|
||||||||||
| CDS seq | ATGAAGTGGGGGCTTAGAAGTAGTAGACACAACCAGAGAGAGAAGCAGCAGCGCACACAAGAGGAAGAGCACAAGCACGAGCAGCAAGAGGACAAGGGCAACAAGAGCAGGGCGGCCTTCCTGTCCTTCTCGCCGCTCGCGTGGCTCTCGAAGCTCACGGCCAAGAACAATGCTGCTGCCGCTAAACCGAAGCCTGCCGCGCCGGCCGACAAGAGCGCCGTCGCCGCCACTGGCGGATTCCCTTCTTGCTTCTTCAAGGCCTCGAGCTCGAGCACGAGCACGAGCGTGAGCTTGAGCTCGAGCGCGGCGTCGCAGAGCAGCCTGGCGGATTCCTCGCCCGCTGACCACCAGGCGCCGCGCCGCCTCTCGGTTGGCAACGACGGCGACACCGCCGAGGCTGCGGCCGCGCGGCAGCTGTACCACCGCCGCCGCCATTACTCGGTCGGCGGCGACCGGGACCTCCAAACCCTCCGCAACCTCATCCCGTTCTCCCGGGCCGCTTCTCCGATCCCGGTGCCTGCTCCGTTCGTCCCGGCGCTGAAGACGACGCCGCCGCCGCTGCCGTCCGACACGGACGAGGAGAAGCGGCCGCGGAGCCGCCGGCGCCGGCGCCGCAGCGGCGGCGGCGGGCGGCGGTCGTTCTCCGGGAGGACCCCGGGCGCGCGGGTGGCTGCCACCGTGCGCGTGCGGTCCCCGCATCGCGTGGCGTCGGCGGCGGCGGCGGCGGTGTCGGAGCTGGAGCGGTTCGCGGTGGTGCGCCGGACGAGCGACCCGCAGCGGGAGTTCCGCGCGTCGATGGTGGAGATGATCGCGAGCAAGCGCATCGGCCGGCCGGAAGAGCTGGAGACGCTCCTGGCGTGCTACCTCTCGCTCAACGCCGACGAGCACCACGACTGCATCGTCAAGGTGTTCCGGCAGGTCTGGTTCGAGCTCAACCCCGCCCGCGTCGCCGCCGTTGCGCCGCCGCGCAGCTGA
More
|
||||||||||
| Protein seq | MKWGLRSSRHNQREKQQRTQEEEHKHEQQEDKGNKSRAAFLSFSPLAWLSKLTAKNNAAAAKPKPAAPADKSAVAATGGFPSCFFKASSSSTSTSVSLSSSAASQSSLADSSPADHQAPRRLSVGNDGDTAEAAAARQLYHRRRHYSVGGDRDLQTLRNLIPFSRAASPIPVPAPFVPALKTTPPPLPSDTDEEKRPRSRRRRRRSGGGGRRSFSGRTPGARVAATVRVRSPHRVASAAAAAVSELERFAVVRRTSDPQREFRASMVEMIASKRIGRPEELETLLACYLSLNADEHHDCIVKVFRQVWFELNPARVAAVAPPRS |
||||||||||
| Function | Transcription repressor OFP2 [UniProtKB/Swiss-Prot:O04351] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0521000 | OsMH63_01T0521000.1 | Chr01 | 33258193 | 33259834 | + | maker | ||
| CDS seq | ATGAAGTGGGGGCTTAGAAGTAGTAGACACAACCAGAGAGAGAAGCAGCAGCGCACACAAGAGGAAGAGCACAAGCACGAGCAGCAAGAGGACAAGGGCAACAAGAGCAGGGCGGCCTTCCTGTCCTTCTCGCCGCTCGCGTGGCTCTCGAAGCTCACGGCCAAGAACAATGCTGCTGCCGCTAAACCGAAGCCTGCCGCGCCGGCCGACAAGAGCGCCGTCGCCGCCACTGGCGGATTCCCTTCTTGCTTCTTCAAGGCCTCGAGCTCGAGCACGAGCACGAGCGTGAGCTTGAGCTCGAGCGCGGCGTCGCAGAGCAGCCTGGCGGATTCCTCGCCCGCTGACCACCAGGCGCCGCGCCGCCTCTCGGTTGGCAACGACGGCGACACCGCCGAGGCTGCGGCCGCGCGGCAGCTGTACCACCGCCGCCGCCATTACTCGGTCGGCGGCGACCGGGACCTCCAAACCCTCCGCAACCTCATCCCGTTCTCCCGGGCCGCTTCTCCGATCCCGGTGCCTGCTCCGTTCGTCCCGGCGCTGAAGACGACGCCGCCGCCGCTGCCGTCCGACACGGACGAGGAGAAGCGGCCGCGGAGCCGCCGGCGCCGGCGCCGCAGCGGCGGCGGCGGGCGGCGGTCGTTCTCCGGGAGGACCCCGGGCGCGCGGGTGGCTGCCACCGTGCGCGTGCGGTCCCCGCATCGCGTGGCGTCGGCGGCGGCGGCGGCGGTGTCGGAGCTGGAGCGGTTCGCGGTGGTGCGCCGGACGAGCGACCCGCAGCGGGAGTTCCGCGCGTCGATGGTGGAGATGATCGCGAGCAAGCGCATCGGCCGGCCGGAAGAGCTGGAGACGCTCCTGGCGTGCTACCTCTCGCTCAACGCCGACGAGCACCACGACTGCATCGTCAAGGTGTTCCGGCAGGTCTGGTTCGAGCTCAACCCCGCCCGCGTCGCCGCCGTTGCGCCGCCGCGCAGCTGA
More
|
|||||||
| Protein seq | MKWGLRSSRHNQREKQQRTQEEEHKHEQQEDKGNKSRAAFLSFSPLAWLSKLTAKNNAAAAKPKPAAPADKSAVAATGGFPSCFFKASSSSTSTSVSLSSSAASQSSLADSSPADHQAPRRLSVGNDGDTAEAAAARQLYHRRRHYSVGGDRDLQTLRNLIPFSRAASPIPVPAPFVPALKTTPPPLPSDTDEEKRPRSRRRRRRSGGGGRRSFSGRTPGARVAATVRVRSPHRVASAAAAAVSELERFAVVRRTSDPQREFRASMVEMIASKRIGRPEELETLLACYLSLNADEHHDCIVKVFRQVWFELNPARVAAVAPPRS
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0521000 | OsMH63_01T0521000.2 | Chr01 | 33258193 | 33259834 | + | maker | ||
| CDS seq | ATGAAGTGGGGGCTTAGAAGTAGTAGACACAACCAGAGAGAGAAGCAGCAGCGCACACAAGAGGAAGAGCACAAGCACGAGCAGCAAGAGGACAAGGGCAACAAGAGCAGGGCGGCCTTCCTGTCCTTCTCGCCGCTCGCGTGGCTCTCGAAGCTCACGGCCAAGAACAATGCTGCTGCCGCTAAACCGAAGCCTGCCGCGCCGGCCGACAAGAGCGCCGTCGCCGCCACTGGCGGATTCCCTTCTTGCTTCTTCAAGGCCTCGAGCTCGAGCACGAGCACGAGCGTGAGCTTGAGCTCGAGCGCGGCGTCGCAGAGCAGCCTGGCGGATTCCTCGCCCGCTGACCACCAGGCGCCGCGCCGCCTCTCGGTTGGCAACGACGGCGACACCGCCGAGGCTGCGGCCGCGCGGCAGCTGTACCACCGCCGCCGCCATTACTCGGTCGGCGGCGACCGGGACCTCCAAACCCTCCGCAACCTCATCCCGTTCTCCCGGGCCGCTTCTCCGATCCCGGTGCCTGCTCCGTTCGTCCCGGCGCTGAAGACGACGCCGCCGCCGCTGCCGTCCGACACGGACGAGGAGAAGCGGCCGCGGAGCCGCCGGCGCCGGCGCCGCAGCGGCGGCGGCGGGCGGCGGTCGTTCTCCGGGAGGACCCCGGGCGCGCGGGTGGCTGCCACCGTGCGCGTGCGGTCCCCGCATCGCGTGGCGTCGGCGGCGGCGGCGGCGGTGTCGGAGCTGGAGCGGTTCGCGGTGGTGCGCCGGACGAGCGACCCGCAGCGGGAGTTCCGCGCGTCGATGGTGGAGATGATCGCGAGCAAGCGCATCGGCCGGCCGGAAGAGCTGGAGACGCTCCTGGCGTGCTACCTCTCGCTCAACGCCGACGAGCACCACGACTGCATCGTCAAGGTGTTCCGGCAGGTCTGGTTCGAGCTCAACCCCGCCCGCGTCGCCGCCGTTGCGCCGCCGCGCAGCTGA
More
|
|||||||
| Protein seq | MKWGLRSSRHNQREKQQRTQEEEHKHEQQEDKGNKSRAAFLSFSPLAWLSKLTAKNNAAAAKPKPAAPADKSAVAATGGFPSCFFKASSSSTSTSVSLSSSAASQSSLADSSPADHQAPRRLSVGNDGDTAEAAAARQLYHRRRHYSVGGDRDLQTLRNLIPFSRAASPIPVPAPFVPALKTTPPPLPSDTDEEKRPRSRRRRRRSGGGGRRSFSGRTPGARVAATVRVRSPHRVASAAAAAVSELERFAVVRRTSDPQREFRASMVEMIASKRIGRPEELETLLACYLSLNADEHHDCIVKVFRQVWFELNPARVAAVAPPRS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.3304105 | 1.756735 | 0.731131 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0625900 | SBH | 0.0 | 0.179096 | 0.426836 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g54570 | RBH | 0.0 | 0.0 | 0.073034 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0823500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0033640 | RBH | 0.0 | 0.0 | 1.783406 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0033160 | RBH | 0.0 | 1.070111 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0033600 | RBH | 0.0 | 1.680896 | 0.530667 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0032860 | RBH | 0.0 | 0.009015 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0032630 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0397000 | RBH | 0.48486 | 0.692118 | 0.4934115 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0032340 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0515700 | RBH | 0.457235 | 1.054941 | 6.0332245 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0032520 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0032580 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0032820 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0032930 | RBH | 0.0 | 0.334886 | 0.050962 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0032710 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G033190 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0032790 | RBH | 0.0 | 3.530834 | 0.797044 |
| Os XI: R9311 | R9311 | AGIS | R9311C01g03701 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_01g0384800 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_01g0389400 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_01g0369900 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_01g0393200 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0180000900.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0180000185.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_003591 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0180200135.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0103896700.01 | SBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0180000226.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0180000347.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0180000616.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0180000245.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0180000239.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0180000331.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0180000314.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0180000212.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0180000341.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0180000325.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0100887700.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0180000355.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0180000289.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0480001232.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0101996100.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0102307900.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0180200168.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0180000312.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0180000293.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0180000360.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0180000311.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0180000271.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0180000286.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0180000320.01 | RBH | None | None | None |
