Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0454300 | OGI:01083010 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr01:29069043-29074032 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | ATGGTCATCGCCGCTCACCGCCACCAAGGACTGTCATGCAAGTCATCACCGCTCGCCACCATGGTCATCACCACTCTCCACAGCAAATCCAGCGAGCTCGCGGCGAGATCTAATAAGCTCACATTCGGATCCAGTGAGCTATTTGATTCAACGGAGGAGAAGGGAGAAGAGACGGCACTGACGTCAACGAAGAAGGGAGGGTTGCATGATGGTGGATGGGGAGAGGGAGAGAGGCAGAGACGGGCAATGAAGTAGCGTTGTAGTGGCGAAGTCGTCAGCCTCTTCGAAGAAAATAGAATCTATGCGAAAATATAGAGAGAGAGAGGAGTGAGGGAGAGGAAAAAAATGAAGGTGGTGGAGTCGTCGGCGTCTTTGAAGAAAAATGGCCATGGTGGGAAGATATTGGGGGAGGGAGAGGAAAAAGATAAAGTAGGAGAGGCTCGGGGTCATGTAAAGATAAGGTCACATAAAAGACTAATTGCACGTAAGATCTAAAATAGATACATGGTTATTGTAAGGTTTAGAGTCTAAAATATAAAAGTTTCAGTGGATACATTGTTATTTTAGGTTTAAGATCTAAATATAAAATATAAAAGTTCCAGTTAATTAATAATAAGAAATTATTCTACTTTCTCGTTTTTCTTCATAAGAACATTTTCTAAACTGGTTTAAGGGTGTGTTTTTCAAAACGGAAATTTTAAATTTGTTCTCCTTCTATTTTATATTATAAGTTGTTTAATTTTTTTCTAAAATTATAGCGAAACATAGTAGCATTTTCAATAAAAACAAAATTTTATTAAAATATATTTATTATAATTTAATGAAACTAATTTGATAATCCCTCTGTTTCATAATGTAACACTTTCGACAATGCTATAAAGTCATATAACACTTTCGACAATGCTATAAAGTCATCTATATTAATTGGATAAAGTCATCTATATTAATGTGGATAATACTATAAAATCAAAAAAAAAGTATCATAAATCTTATTATTTTTTTATATAAATTGGATTAAAAAAACTTTAATTAAAAAATAAACAACTTATTAATAACTTAACTCTGGTAGTGTGGTTATAGACTCCGAATTGCAGCTTCTACCGAGCAAAATACGTAAAATTGTTTTGAGGTATAAAAATTTTGGGATTCAAGATTTGTAGGGCTTTACCCTCCCCGAAGAGAAGGAGCCCTTCCAGAAATTCTCAGTGGCCCTGACGGGCCAAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAATTGACGCGCCTCGGTATTACCTCACTAGCTGCGTCATTGCCCCAAGCGCAAAGATGCCTCTCTAGCTAGCCCCCCACCCCCATCTTATACCCATCACGTCCTCCTCCCTCTCCTCCATCTACCGAGGTGGTACTAATCCATCGCAAAACCAGCACGCACAACGCCCCGCGCCACTTGTACCAGCAGCGGCCGAGGCTGCATGGGCCGAAAGCCCAGCTCAACTGGGCCGCACGGCCGGCCCAACGAGAGATCTAGTCTACTCTCTCCTCTCCGCCTCGCTTCGCCGTCTCTTTTCCTTTCGCCGCTGCAAACCTCCGTCTCCTCCGGCTCCGGCTGCTCGGGGCCTAAACCCTCGCCGCGTGTACTAAAAACCCCGGTGGCCCAGGCGGCGGAGGGATGAAGACGAGGTCGCAGACGGCGCCGAAGCCGCTGAAGACGGTGCGGCTGCCTCCTGTCAAGCCGCGGCCCAAGCCGCCGCCGCCGCAGCCGCAGCCGCCGCCGTCCCGGAAGAAGGGGCAGCCCCTCGTCGACCGGCGCCGCCCCAAGAAGCCGCCCACCGCCTTCTTCTACTTCATGTGCGTGTATTATCTGGTTCCCTTTCTCTTTGTGTGGATTTGCCTGGTCTGTCAGTGCGTGCCGTGGCTGGCTCTTGCCACGAGGTGATTGGTGCTGCTGTTACCGGGGGCTTATTTCTTTTTCTTTTTATTAATCGAATTGTTTCCTTGCATAGATTAGAACTTTGTTTTAGGAGCTTTTTTACTCACCAACTTCGAATTGAGTGGTGCCTTGGTGGTAATACGGTGCAGCAAGTTCGCATGCGAAATATTTACGATACTGCCTCCGGTCCGTGGCAATTAGGAAAATGGTTGGGTATGTTAGGGACTGAATTTACTAGGTTTTACAGGGCATCTCAATCTGAGGTGCATTTTTCGATCTGTTCCCTAGTCATGGATGGACTCATTGTTGTAGCTTGTGCAATCAGGTTTCACCCCAAGTTTATGTAGATTGGCATTGTTTACATCTCATTTTGGAAGGCTGGGATCCTAGATTCCTATTTGAGTTATCCTGCGATATTATATAGGATTGCCCTGTTCTTTATTAGAATTTGATTGTTTTTCCTAAAGACGGAGTGAGGCAGGTTATTTTGTGGTCCTATCTTGGGAGTTGGCAACTGAAACTATGCACCACTTTTTTTTTTGAGTACCAAAGTGTGTGCTTCCCCTGCAACATATGCGAAGGGCACAGCCTTTACCTAATTGAACAGGCATATCTGATGTTCCTTGTCCACAATTGCATCGAAAGATGTGTGGTTACTGATATAAAATGAATGCATATGTTTTTGACTTGGTCATGCTTTTGATGGTTACGAAGTGTTTTAGCTACTGATAGAGAGTAATGGCAACATTTACATGCTACCAGAATTGTCTAGATGCTTTATACCGCATCCAGTCATCAACATTAAACATAGTGCTTACTTCCTTGAGGTGTTTCACATAAATTTAGCCATTTAGGTGTAACCAAAACACAAAAGTTACTCTGTTGTTTTTGCCTCTTATTTTCATATCTTGTACTGAATCAACTCAGTCAAGTTTTACTGAAAAACTGTTATGGTCTGCTGAAGGGAGGATTTTCGGAAAACTTACAAGGAAGAAAATCCAAGTGTAAAATCAATGCAAGAAGTAAGTTTCCATCAGTTAACGTTGAAGCTTTAAGCTACTTAGTCATCTAGTAATATATCTTACCCTGCAGGTAGGGAAGGCATGTGGCGAGAAATGGAATACAATGACATTTGAGGTTTGTGATTTCACCTTAGTGATGTTTGTGGTCAATTAGGTCTCTAGTCGCTGTAAATTTTCTATCACTCAAGTACCAAACCATGCTTCTCTGTAAGTTGTAACGCATGGCTGTTTTGGTTTGAAGCCAAAACTTGCCCTACCAAAATGTTGGCTTCTTGTATAGTAATTTGGCACCATTTGGTTTGCTACCAAAATTTACCTACACCACACAAAAGTTGCCAAAAATCTGGAAGTGCCAAAACTTGCCTATGTTTTGGCATTGCCAACATTTTGGCATGGTAGCAAACCCAACAAACACATAAAATGATTGATAGAAACATGATGGCACCACAAATCTGTACATGCGGAGTTGAGATGTATATTGACTTATTCTTTTGTTTCAAAATCACTTTTTTTTTAAACCATCAAGCAGAAGTTCCTGCTTCAGTGTATTGTATTAGTAAGGTTTAATTTCGAAGTTTAAAAAGGGATATTTGAGCCATATCTGCTCTTTTTTGTCTACTGTTTATGTGCCTAGTGTTAAAACTAGATAACTAATCTATTTATTCTAAACTTCCTTGAATTAACTGGTACAGCCTACAAAAAAAGTGATCATTGAGTCTAGGCCTCTAGGGAGTAATTCTAACGAAATAGCTGAAGGATCGGATTGACATATATTGCAACTGTAGAAGCTTTGTAGCCGATACGCTCAAACAGCTAAAGTAATACATTGACATGGACTGTAACTGTAGAAGCCCAAGAATGTACTTTGTAGGTGTTACATCTACTGTTCAGTTGGATAATGGTACATGATTGCATATTTACTTTTTCCCCCTTTTGTTCAGTAGGTTCATTCCATGTATGTTTAGTATAGTCGCATTTCAAAGGATTTGGTGCCAACTGCCAAATACCCATGTTTCCTATTTTTTTCATGCTACCAACCCATAGGGAAAACAAAAGAAGGTGCTACTGCTGTGAAGCATATCAAGATCACCTGTGGATTCCTTAGAGCTTTAAATACCAGATATGTAGTTTGGAATTTTCCTTTTTAGAAATCATAGTTTGGACCAAACTGCCAGTTGAACCAGGAAAAGATAGAAATTGTTGGCTCCAGCAGTTTGGGTTCACTCAAAGACCATTCATGCAATCAAAGCCAGAAAAGGCCGGGTGAACTATTTGTGTTGTTTTGAACTTTTGATTGGTAAATATATATTTCCTTTGTTTTTTCAGGCTCTTCTTTTGGGTTCTTAAATAATACTATGCTTTCAAATTATCAGTTTAGTACACAGTGGACTATGTAGGAATTCTGACTCATTGTCAAAATAAATGGTCTAGGCAATACAATATCTCATATCAGATATGTACAACTTCATTTCACATTTTTGCGCATTGCATTTTAGACATAAACTCATATCATACTTATGTCAACAATTTCACTTTTGTTCATTACACCAGGAAAGAGTGAAGTATTATGATATAGCAACCGAGAAGCGTGCAGAGTATGAGAAGGCGGTGGCTGAATTTGACAAGAAAAAGGTGTATTTTCTGCATATATATTGCACGTGTTTTTTTCGTGTCTATTCAATTTTTCCATGCATAAAATCATACTTACCTTATTTTCAATGCAGGAAAGCGGTGAATTGTCCGAGGAATCAGATTACGACTAGAGGTGAACGTCGGGTAGTTGTTCCGATGGTTCACCCAAGTAATTGGATGGACGAATCAATTGTATATTACAGAACTGAGGCACTGAGCTTTGTAATGGAATCTATATATAGTCAGTTTCCTGCTCATTCTAGAGTGAACTATCGTCTTGTGATAAAGTGATAGCTTTGGATCGAGTATTCGCTGGTACACCACCAGTGCTTGAAATAACTAAATCTTTGGGCACCGAAATTACAATTCTCTTGGTCATTCATTTTAACTAAAGAAAAATAGTATGCCACATTAAGCATCCAG
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| CDS seq | ATGAAGACGAGGTCGCAGACGGCGCCGAAGCCGCTGAAGACGGTGCGGCTGCCTCCTGTCAAGCCGCGGCCCAAGCCGCCGCCGCCGCAGCCGCAGCCGCCGCCGTCCCGGAAGAAGGGGCAGCCCCTCGTCGACCGGCGCCGCCCCAAGAAGCCGCCCACCGCCTTCTTCTACTTCATGGAGGATTTTCGGAAAACTTACAAGGAAGAAAATCCAAGTGTAAAATCAATGCAAGAAGTAGGGAAGGCATGTGGCGAGAAATGGAATACAATGACATTTGAGGAAAGAGTGAAGTATTATGATATAGCAACCGAGAAGCGTGCAGAGTATGAGAAGGCGGTGGCTGAATTTGACAAGAAAAAGGAAAGCGGTGAATTGTCCGAGGAATCAGATTACGACTAG
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| Protein seq | MKTRSQTAPKPLKTVRLPPVKPRPKPPPPQPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKKKESGELSEESDYD |
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| Function | High mobility group B protein 14 [UniProtKB/Swiss-Prot:O64702] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0454300 | OsMH63_01T0454300-mRNA-1 | Chr01 | 29070515 | 29074032 | + | maker | ||
| CDS seq | ATGAAGACGAGGTCGCAGACGGCGCCGAAGCCGCTGAAGACGGTGCGGCTGCCTCCTGTCAAGCCGCGGCCCAAGCCGCCGCCGCCGCAGCCGCAGCCGCCGCCGTCCCGGAAGAAGGGGCAGCCCCTCGTCGACCGGCGCCGCCCCAAGAAGCCGCCCACCGCCTTCTTCTACTTCATGGAGGATTTTCGGAAAACTTACAAGGAAGAAAATCCAAGTGTAAAATCAATGCAAGAAGTAGGGAAGGCATGTGGCGAGAAATGGAATACAATGACATTTGAGGAAAGAGTGAAGTATTATGATATAGCAACCGAGAAGCGTGCAGAGTATGAGAAGGCGGTGGCTGAATTTGACAAGAAAAAGGAAAGCGGTGAATTGTCCGAGGAATCAGATTACGACTAG
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| Protein seq | MKTRSQTAPKPLKTVRLPPVKPRPKPPPPQPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKKKESGELSEESDYD |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0454300 | OsMH63_01T0454300-mRNA-2 | Chr01 | 29070440 | 29074032 | + | maker | ||
| CDS seq | ATGAAGACGAGGTCGCAGACGGCGCCGAAGCCGCTGAAGACGGTGCGGCTGCCTCCTGTCAAGCCGCGGCCCAAGCCGCCGCCGCCGCAGCCGCAGCCGCCGCCGTCCCGGAAGAAGGGGCAGCCCCTCGTCGACCGGCGCCGCCCCAAGAAGCCGCCCACCGCCTTCTTCTACTTCATGGAGGATTTTCGGAAAACTTACAAGGAAGAAAATCCAAGTGTAAAATCAATGCAAGAAGTAGGGAAGGCATGTGGCGAGAAATGGAATACAATGACATTTGAGGAAAGAGTGAAGTATTATGATATAGCAACCGAGAAGCGTGCAGAGTATGAGAAGGCGGTGGCTGAATTTGACAAGAAAAAGGAAAGCGGTGAATTGTCCGAGGAATCAGATTACGACTAG
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| Protein seq | MKTRSQTAPKPLKTVRLPPVKPRPKPPPPQPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKKKESGELSEESDYD |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0454300 | OsMH63_01T0454300-mRNA-3 | Chr01 | 29069043 | 29070553 | + | maker | ||
| CDS seq | ATGGTCATCGCCGCTCACCGCCACCAAGGACTGTCATGCAAGTCATCACCGCTCGCCACCATGGTCATCACCACTCTCCACAGCAAATCCAGCGAGCTCGCGGCGAGATCTAATAAGCTCACATTCGGATCCAGTGAGCTATTTGATTCAACGGAGGAGAAGGGAGAAGAGACGGCACTGACGTCAACGAAGAAGGGAGGGTTGCATGATGGTGGATGGGGAGAGGGAGAGAGGCAGAGACGGGCAATGAACACGCACAACGCCCCGCGCCACTTGTACCAGCAGCGGCCGAGGCTGCATGGGCCGAAAGCCCAGCTCAACTGGGCCGCACGGCCGGCCCAACGAGAGATCTAG
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| Protein seq | MVIAAHRHQGLSCKSSPLATMVITTLHSKSSELAARSNKLTFGSSELFDSTEEKGEETALTSTKKGGLHDGGWGEGERQRRAMNTHNAPRHLYQQRPRLHGPKAQLNWAARPAQREI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.36109 | 15.7376975 | 20.0462 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0666200 | RBH | 0.797346 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g47600 | RBH | 0.500592 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0666200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0028300 | RBH | 1.100225 | 0.000000 | 3.917983 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0027830 | RBH | 0.0 | 0.0 | 0.419735 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0028270 | RBH | 1.529646 | 2.769516 | 3.701168 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0027490 | RBH | 0.0 | 0.233198 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0027270 | RBH | 5.467051 | 4.635027 | 4.091009 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0026970 | RBH | 0.300601 | 0.645896 | 0.560469 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0443000 | RBH | 5.1916785 | 39.6704655 | 32.995981 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0027220 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0027140 | RBH | 0.610753 | 8.432068 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0027450 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0027530 | RBH | 0.742250 | 0.635573 | 0.747958 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0027340 | RBH | 0.000000 | 1.861299 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G027720 | RBH | 0.414634 | 1.178050 | 0.466878 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0027460 | RBH | 0.000000 | 0.000000 | 2.090391 |
| Os XI: R9311 | R9311 | AGIS | R9311C01g03089 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_01g0324600 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_01g0329200 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_01g0312200 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_01g0333600 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0101014300.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0103727300.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_002994 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0103455300.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0103497100.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0101197900.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0101015100.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0100622700.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0101121900.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0101187700.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0101023100.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0100989300.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0103398700.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0101004900.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0101003900.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0100744100.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0101029900.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0101007300.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0101024500.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0101714900.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0101996500.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0105694700.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0101034900.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0100985100.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0100996900.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0101020100.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0101022500.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0100999100.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0101007500.01 | RBH | None | None | None |
