Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0127500 | OGI:01024560 | 48/50 | Minghui 63 | MH63RS3 | HZAU | Chr01:7963191-7965158 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_INS0113190,Basmati1_MH63RS3_INS0110640,Lemont_MH63RS3_INS0111910,128077_MH63RS3_INS0110450,127652_MH63RS3_INS0110980,R9311_MH63RS3_INS0103090,ZH11_MH63RS3_INS0112200,DHX2_MH63RS3_INS0111630,KY131_MH63RS3_INS0112050,125619_MH63RS3_INS0108490,Kosh_MH63RS3_INS0111730,132424_MH63RS3_INS0106000,117534_MH63RS3_INS0111580,132278_MH63RS3_INS0113030,117425_MH63RS3_INS0111030,Azucena_MH63RS3_INS0112300,OglaRS2_MH63RS3_INS0112110,Nipponbare_MH63RS3_INS0111220,LJ_MH63RS3_INS0112040,
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| DNA seq | ATGAAAGACAAGGTATGTCCGATCGTGTAAATCGTTCGTAGCGTTAGTATTATTAGTTTAAGCGTCGCCGTTACTTCGAGTTGACTCGTTCTGTTCATTTGATTTTTTGCTAGTTTCACCGTTCTGGACTTTGCTTGGAAGTTCCCATGTATATTGACGACGGCGAGTATTTTGGGGATGAAACCGGTACCCAGCTGAAATGTCGTCATGGCCTCCGCCCGAAGAGAAGAACTGCATGGGAAGGGAAGGACACCGGAAGAAGGTTTCTTGGTTGCCCACTGGAGGAAGAGGACCAGTGCGACGCTTTGTTTTGGGTTGACGAAGAATGGCAACCAAGAATACAAAAGGCATTTGAGATGCTCTGGCTTGCATTGGACCATGCAAGTACACGCAACCCTACCAAGGCGCAGTACCAATGGTCAAATTTTGTAGACAGAACAATAGTCGAAGAAGACAAAATGAAGTTAGAATTTCAGATGGCTTCACAGATCTCGGCAATCGAAGCAAAACATAAGAAGAGAGTTTCCAGGATAAAAAAGGAAACAGAAGACCTCAAGGCTTGGCTTATGGGTTCCCTAGTCGTTATTGCATTTCTTTTATTTAAAATTATCGAAAATATGTATCAGGGATGTTGATGCTTCAAATATGTATGACGTGTGTTGATGCGGCTTTAAATTTGTGTCAATCTATTTCATTGCTAATTATCACGTCACAAAAGCCCATTGAGTGGCCCGTTTATTGAAGCCCATAAGGTGGCCCATTTTATAGACAATAAAAGGCACACTCTCTAGGGTTTCCCCCATCCACAACCTTCATCCCATCTGACCGACCATGTGAGGAGCCAGCCGACCCCGCCGCCGACACCTCCGATCCCGCCGTCGACGCCGACCCCTCCGACCCCGCCGTCGACCCCGACGACGACTCCCCCGCCGACGACCACGCCGACGGTCCCGACCCCGCCGTCGACCCCTCAGACCCCGCCGTCGACGCCGACCCCTCCGACCCCGCCGACGACGCCGACGACTCCGACCCCGCCGACTGCGCCGCCGACTCCGACGTGGCTTCAACCCCTCCGACTGCCCGACCTCGCCTACGCAGCCGACTATGGTGAACAACAGGAAGGTTGTTATCCAAGTCGACAGTGACACGGGTAATGTTTTGCATCCATCGATTTGTGTTAACATTTTTTTGATGACCGTGAATTGAGCAATTGATTTGTGTTAACATAGATGAAGAGGTAAAATCCGACAGTGACACTGAGACAGAATCCGAGAGTCATATGGAAGAGGAAGTAGACCCTTCATCATTTTTTGCTAGTGTGCGGCGCGAAACTATCAAGTGTGGTTAGTATGCTTGTTTTACCGAGACTATCAATTGAGGTGATTGAGTTTTTTTTTTTTGGTATTATCTATTGTGGTTACTATGTCGGTTCATTTGTGCAGGGCCAAACGGCCTGCAGTACGCTGGAGGCTTTCATAGTAGATGCTGGTATGGAAACGATGTGTACTTGACAAGGGCATACCAGATGAAGATAGCAGCCATAGCAGCAAAGAAAAGACCTGGAATTCCCCTCTATGTCTTATCAGATTTACAAATTCAATATTGAAAAGTCTAAGATGGTATGTATAAATTGGAATTATCGTATTTTGGCAGCTTCCGTTTTTAAATATGTTTTGCATGGCCTCTTATGTGTAATTCTGAATTACTTTGTAGGCGTTTTCAGCTCTGTTCAGTAGGCAATACATACAACCGTACTTGCAAGACCCTATTGACCAGTTTCCAGTGCTGATCTGTGACTCCACGGAAATCTACAACGTGAGGTTCTATGTCTCAACTGACGATAGGGCAACCCTCACAATTGGCTGGACTTCATTCCTCGAAGGAGCAGGAATCGATGTGGGCACGACTTGTGTGTTTCAGTTGTACGATAGGGATGGTCAGCTCGAACTTTGTGTTCACAACCTGTAG
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| CDS seq | ATGAAAGACAAGTTTCACCGTTCTGGACTTTGCTTGGAAGTTCCCATGTATATTGACGACGGCGAGTATTTTGGGGATGAAACCGGTACCCAGCTGAAATGTCGTCATGGCCTCCGCCCGAAGAGAAGAACTGCATGGGAAGGGAAGGACACCGGAAGAAGGTTTCTTGGTTGCCCACTGGAGGAAGAGGACCAGTGCGACGCTTTGTTTTGGGTTGACGAAGAATGGCAACCAAGAATACAAAAGGCATTTGAGATGCTCTGGCTTGCATTGGACCATGCAAGTACACGCAACCCTACCAAGGCGCAGTACCAATGGTCAAATTTTGTAGACAGAACAATAGTCGAAGAAGACAAAATGAAGTTAGAATTTCAGATGGCTTCACAGATCTCGGCAATCGAAGCAAAACATAAGAAGAGAGTTTCCAGGATAAAAAAGGAAACAGAAGACCTCAAGGCTTGGCTTATGGGGTTTCCCCCATCCACAACCTTCATCCCATCTGACCGACCATGTGAGGAGCCAGCCGACCCCGCCGCCGACACCTCCGATCCCGCCGTCGACGCCGACCCCTCCGACCCCGCCGTCGACCCCGACGACGACTCCCCCGCCGACGACCACGCCGACGGTCCCGACCCCGCCGTCGACCCCTCAGACCCCGCCGTCGACGCCGACCCCTCCGACCCCGCCGACGACGCCGACGACTCCGACCCCGCCGACTGCGCCGCCGACTCCGACCCGACTATGGTGAACAACAGGAAGGTTGTTATCCAAGTCGACAGTGACACGGATGAAGAGGTAAAATCCGACAGTGACACTGAGACAGAATCCGAGAGTCATATGGAAGAGGAAGTAGACCCTTCATCATTTTTTGCTAGTGTGCGGCGCGAAACTATCAAGTGTGGGCCAAACGGCCTGCAGTACGCTGGAGGCTTTCATAGTAGATGCTGGTATGGAAACGATGTGTACTTGACAAGGGCATACCAGATGAAGATAGCAGCCATAGCAGCAAAGAAAAGACCTGGAATTCCCCTCTATGCGTTTTCAGCTCTGTTCAGTAGGCAATACATACAACCGTACTTGCAAGACCCTATTGACCAGTTTCCAGTGCTGATCTGTGACTCCACGGAAATCTACAACGTGAGGTTCTATGTCTCAACTGACGATAGGGCAACCCTCACAATTGGCTGGACTTCATTCCTCGAAGGAGCAGGAATCGATGTGGGCACGACTTGTGTGTTTCAGTTGTACGATAGGGATGGTCAGCTCGAACTTTGTGTTCACAACCTGTAG
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| Protein seq | MKDKFHRSGLCLEVPMYIDDGEYFGDETGTQLKCRHGLRPKRRTAWEGKDTGRRFLGCPLEEEDQCDALFWVDEEWQPRIQKAFEMLWLALDHASTRNPTKAQYQWSNFVDRTIVEEDKMKLEFQMASQISAIEAKHKKRVSRIKKETEDLKAWLMGFPPSTTFIPSDRPCEEPADPAADTSDPAVDADPSDPAVDPDDDSPADDHADGPDPAVDPSDPAVDADPSDPADDADDSDPADCAADSDPTMVNNRKVVIQVDSDTDEEVKSDSDTETESESHMEEEVDPSSFFASVRRETIKCGPNGLQYAGGFHSRCWYGNDVYLTRAYQMKIAAIAAKKRPGIPLYAFSALFSRQYIQPYLQDPIDQFPVLICDSTEIYNVRFYVSTDDRATLTIGWTSFLEGAGIDVGTTCVFQLYDRDGQLELCVHNL |
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| Function | B3 domain-containing protein Os03g0164300 [UniProtKB/Swiss-Prot:B7EIH2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0127500 | OsMH63_01T0127500.1 | Chr01 | 7963191 | 7965158 | + | maker | ||
| CDS seq | ATGAAAGACAAGTTTCACCGTTCTGGACTTTGCTTGGAAGTTCCCATGTATATTGACGACGGCGAGTATTTTGGGGATGAAACCGGTACCCAGCTGAAATGTCGTCATGGCCTCCGCCCGAAGAGAAGAACTGCATGGGAAGGGAAGGACACCGGAAGAAGGTTTCTTGGTTGCCCACTGGAGGAAGAGGACCAGTGCGACGCTTTGTTTTGGGTTGACGAAGAATGGCAACCAAGAATACAAAAGGCATTTGAGATGCTCTGGCTTGCATTGGACCATGCAAGTACACGCAACCCTACCAAGGCGCAGTACCAATGGTCAAATTTTGTAGACAGAACAATAGTCGAAGAAGACAAAATGAAGTTAGAATTTCAGATGGCTTCACAGATCTCGGCAATCGAAGCAAAACATAAGAAGAGAGTTTCCAGGATAAAAAAGGAAACAGAAGACCTCAAGGCTTGGCTTATGGGGTTTCCCCCATCCACAACCTTCATCCCATCTGACCGACCATGTGAGGAGCCAGCCGACCCCGCCGCCGACACCTCCGATCCCGCCGTCGACGCCGACCCCTCCGACCCCGCCGTCGACCCCGACGACGACTCCCCCGCCGACGACCACGCCGACGGTCCCGACCCCGCCGTCGACCCCTCAGACCCCGCCGTCGACGCCGACCCCTCCGACCCCGCCGACGACGCCGACGACTCCGACCCCGCCGACTGCGCCGCCGACTCCGACCCGACTATGGTGAACAACAGGAAGGTTGTTATCCAAGTCGACAGTGACACGGATGAAGAGGTAAAATCCGACAGTGACACTGAGACAGAATCCGAGAGTCATATGGAAGAGGAAGTAGACCCTTCATCATTTTTTGCTAGTGTGCGGCGCGAAACTATCAAGTGTGGGCCAAACGGCCTGCAGTACGCTGGAGGCTTTCATAGTAGATGCTGGTATGGAAACGATGTGTACTTGACAAGGGCATACCAGATGAAGATAGCAGCCATAGCAGCAAAGAAAAGACCTGGAATTCCCCTCTATGCGTTTTCAGCTCTGTTCAGTAGGCAATACATACAACCGTACTTGCAAGACCCTATTGACCAGTTTCCAGTGCTGATCTGTGACTCCACGGAAATCTACAACGTGAGGTTCTATGTCTCAACTGACGATAGGGCAACCCTCACAATTGGCTGGACTTCATTCCTCGAAGGAGCAGGAATCGATGTGGGCACGACTTGTGTGTTTCAGTTGTACGATAGGGATGGTCAGCTCGAACTTTGTGTTCACAACCTGTAG
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| Protein seq | MKDKFHRSGLCLEVPMYIDDGEYFGDETGTQLKCRHGLRPKRRTAWEGKDTGRRFLGCPLEEEDQCDALFWVDEEWQPRIQKAFEMLWLALDHASTRNPTKAQYQWSNFVDRTIVEEDKMKLEFQMASQISAIEAKHKKRVSRIKKETEDLKAWLMGFPPSTTFIPSDRPCEEPADPAADTSDPAVDADPSDPAVDPDDDSPADDHADGPDPAVDPSDPAVDADPSDPADDADDSDPADCAADSDPTMVNNRKVVIQVDSDTDEEVKSDSDTETESESHMEEEVDPSSFFASVRRETIKCGPNGLQYAGGFHSRCWYGNDVYLTRAYQMKIAAIAAKKRPGIPLYAFSALFSRQYIQPYLQDPIDQFPVLICDSTEIYNVRFYVSTDDRATLTIGWTSFLEGAGIDVGTTCVFQLYDRDGQLELCVHNL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.793015 | 23.248083 | 6.8079375 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0467300 | RBH | 0.365485 | 0.749628 | 3.558364 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g26794 | RBH | 0.247160 | 0.504187 | 0.915992 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0467300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0017270 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017160 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0012170 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0009650 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0009650 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0127200 | RBH | 0 | 0 | 0.0140795 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0007630 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0009680 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017040 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0009770 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017040 | RBH | 0.259705 | 1.835367 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0016930 | RBH | 0.0 | 0.0 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C01g01381 | SBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_01g0111300 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_01g0111300 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_01g0108900 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_01g0106900 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0100339100.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0827972200.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_001292 | SBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0100948100.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0100834900.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0100341100.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0202581000.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0100233300.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0100336700.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0100340500.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0100328300.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0100322100.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0100859900.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0100324900.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0202572800.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0201740400.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0712349800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0202600400.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0202591800.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0100515900.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0100605700.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0101464300.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0100327500.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0100316100.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0100320700.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0100327300.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0100321700.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0100409900.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0202611600.01 | RBH | None | None | None |
