Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0123700 | OGI:01023660 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr01:7739053-7744839 | ||||||||
| Gene Symbol | OsNLP3,OsNIN-like3,NLP3 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | ACACCACCACCAGCCACATTTGATCCCCCTCCACTCCATTCTCTCCTCCTCCTCTCCCACCATAATGGCCAAGCTCCCCTCCCGCTCCCCACTCCTGCTCCCGCCTCTCCTCCTCCTCCTCCTCCTCAGCCGCCGCGTCGCCTCCTCCTCCACCGCCGCCGCCGCCGCCGCCGCAGCGCGGTCTGAGTGAAGTGAGGTTCTTGGGTGGAAGCGAAGGAGAAGATAGATAGATAGAGAGAGAGAGAGAGGATTAAGGATGGAGGTTGACCCATCGTCGTCTTCGCCGGGCGCGGGGGAAGGAGGAGGAGGAGGAATCGGCAGCGGGGGTGGGGATTTGTGGCCGTTCGACTCGCTCACCACGTCGCTGCTGTTCTCGTCGGTGTCGGCCTCGCCGCAGCCGCTGCCGGCCTCGTCGTCGTCGTGGCTCACGCCGCCCTCGCCGCTGTGGCTGTTCGACGAGCGCCAGCTGCTCCCGCTCGACATGGGCGCCCCCGCTGCCCCCGCCACCGCTCCGCCCGCCGAGGCCGCCGCCGTGGTCGAGGAAGTCCATCGGACCCGCTCCGGTGAGCCTCGTTGCTTCGTATTGGTCGTGCGTTTCTTTTCTTGTTGCTGGATCATACAATTTGGAACGAATAAGGGAGAAAAAAGAAAGATCGAAATTGACCTTCACTGGGATTTTGTTCTCATCTTTGGCTCGGGTTTGTAGATTTGTTCGTTCCTTGGGAATCTTTCTGGCTGCTCCAAAGTTGAAGCAGAGGGGCAGCTGGAATCTTGCTGTTATTCCTGTCGTTGGGACGCTAACCTTTTACCTCCACTGCATGATCCATGAAGTTTCCGAGCTTTATGTTTGACTTCCTTGCCTTCTTTTTGGCATATTTCTTGGCTGTATAAAGATTTGCCCTGTTGATTTATGGAACAAGACAGAATCTTTGCACTCGCTCTTGTAACAGAATGGATAAAATGTTGTAAAGTTAGTTGGTATGTGTTTTGTTGCAATGATATGCTCGTTTTGTTTAATTTGTGTGCTTTCTTTCTATCTACTAGTTTTTATGTGTTAATTTTTATGTTTCTTTCTGTCTGACTTCGTGGTGGTAGTGCGCGTTTTTTTAATGCAAATGATTGCCAAGATCGGTTGATGGTTAATTGGATTCCACTATAGGAGGTAGGGGGAGTATTTGCTGTACTAAATTAACTGTGCATACAAAAAAAGATGACCCTTTTGAAGTGCTATTGTTGCCTGACTCATTTTACTTTATAGCAATGCATAGCACTGCTTTCCTGTGTGTCTCTAATGGTGTGGTGCCTCTAAAGCGTGGATTAAGTGGTGGATTATGACGCCATGGACAGTACTAGCTAGATTGTATAGTTGAAGCAGTTGGATAACGCTTTGCTTGTCTCATTATATTATACTAGTATTTAATACCAGGACAATTTAGGACTACTCCATTTCATTAATTGGTGACTCAAGAAATGGTTTTGGATCGGTGATGGGATTTGCAGCATTGTTGATTCGCTTCACTTCATTGAAAAATAACATGAAGCAATTACAGTTATCAAACTTGATAAGAAACATAGTGTATCATTACTGAAACATGGATTTGTTTGTCGCAATAGCTCTAGGTTTGGAACGAATGGTCAGGCGTAGTGAAGCTTATTATCCATTCAATTAGCAATGTTATTATCCCTTCTTCTTTTATATACTTTTTGCCTTCTTTTCCTGATAGTATTGCATGCTTTTCTGTTATTTAGGGAATTCTGACACGACTAGTAAGAGGGTTGATCAGATTAATAGCAAATGGCAGTTTCACCTATCTATTGATGATAACACGGACAGCTCATGCTTGTTTAAGGAGAGGCTTACACAGGCTCTTAGATACTTCAAGGAGTCCACAGATCAGCATCTGCTGGTTCAAGTTTGGGCACCGGTTAAGAGTGGAGACCGGTATGTGCTTACTACTTCAGGACAGCCCTTTGTACTTGACCAGCAGAGTATTGGGCTTCTTCAGTACAGGGCTGTATCCATGATGTACATGTTCTCGGTGGATGGAGAAAATGCTGGAGAGCTGGGGCTACCTGGGCGTGTGTACAAACAAAAGGTTCCTGAGTGGACACCGAATGTGCAGTATTATAGCAGTACTGAGTACCCACGCCTTAACCATGCAATCAGTTACAATGTTCATGGTACTGTAGCCTTGCCTGTTTTTGATCCTTCTGTTCAAAATTGTATTGCGGTTGTTGAACTTATAATGACATCAAAGAAGATCAACTATGCTGGTGAGGTTGATAAAGTCTGCAAAGCTCTTGAGGTTAGTCTTTTGTTTGCCTGCTGTATACATTTTTGCTTGGATACTGGTTGTCTGGTTGGATATGTGGACATTATATCGTTAACTAGCAGCTGTATTAACCATCTGTAGCATAAGTTTTTTCTAATCTAGTTATATCTTACATTTTCTTGTGCTACCTGCAGGCAGTAAATCTCAAAAGCACTGAGATATTGGACCATCCGAATGTCCAGGTGTGCATTCAATCAATCTAGACAAATAAGTTTTCCTGTTTCCACTGTGGGGATGGGTTATGCTCATTTTTTAATCTTCTTTCTTGCTCAGATATGCAATGAAGGCCGCCAATCTGCTTTGGTGGAGATACTGGAGATCTTGACGGTCGTATGTGAAGAGCACAAGCTTCCTTTGGCTCAAACCTGGGTTCCTTGCAAGTATCGAAGTGTACTGGCACATGGCGGTGGTGTTAAGAAGAGTTGTTTGAGCTTTGATGGAAGTTGCATGGGGGATGTTTGCATGTCAACCAGTGATGTGGCATTTCATGTTATCGATGCTCATATGTGGGGATTTAGAGATGCATGTGTAGAACATCACCTACAGAAGGGACAAGGAGTTTCTGGGAAGGCTTTTATCTATCGTCGACCTTGCTTTTCTAAAGATATCAGTCAATTCTGCAAGTTGGAGTATCCCCTTGTACACTATGCTCGAATGTTTGGTCTAGCTGGCTGCTTTGCAATATGTTTGCAAAGTATGTATACTGGAGATGATGATTATATATTAGAGTTCTTCCTGCCACCAAATTGCAGGAACGAAGATGATCAAAATGCCTTGTTGGAGTCCATATTAGCTCGAATGAAGAAGTGCCTTCGTACCCTAAAGGTAGTTGGCAACGGAGACACCAATGAAGTTTGTCTGCAAATAAGTAATGTGCTAATAATTGAGACTGAAGATTTGAAGACACATGTGCACTTTGAGAATTCTGAAGGTTGCTTTCGTGAATCGCCTGAAAGTAATGGAAGCCAAAGAGCCCATGAGGTTGATAATGATGGCAACAAAGTTTCAATCATGTCAGAGAGACATTTGCTAGCTGATGACAACTCTCAAAACAATGGGGCATCTGTTGGCAGGCCAAATGGTAGTGGTGCTTCTGATTCGCTTCACAAAAGTAATAAACCCCCTGAAAGGAGACGAGGAAAAGCTGAAAAAACAATCAGCTTAGACGTTCTTCAGCAATATTTCTCAGGAAGCCTAAAAAATGCAGCAAAAAGCCTTGGTGGTATGACTAGTATTTGAGCTCATATTTCTCTTCCTTTTATGTCCCACTCTTTCTGACATATTTCCCACTCTACTATTGCCACATTAAACGCATGAATTAATGTTTGCTTCCAATACATGACAATTTAGTCCTGGCTAGTGCAGGAACATAGTTACTAAGAACACGGTTTGATTAGGTCAAGGAATGGGTTTGTGGCACACCACTGTTTTCTCAATTTTGTAGGAGCGATGCATGACATGCTGCAAATAGTACTGGCTCACGCATATGTGCATGGGTCAATGAATCTGTTTATGTGGTATGCGTGGGGTTGTATACTTGTATCTAGTGAACCAGTGAAGTATGCACATGGAAATGAAAAGAGAAAATTCCCTGTGTACCCTTGAAAGGAGAATGTTATTTTGCTATCTACCTGTATTTATTCATTTTAGACTGAAATGTAGCTTGCAGATATGCGCTTCTATTTTGTATGCATAATGCATCTGCTTTTTTGTTCTATTTATTATGGAACTATGTTTTTGATATAGTTGACATTCGGGATCTTATTTTTGTTTTTATTTTGTTAATAACCTTGATGCCATCACTAGGTGCTTTTATGGTTGTATATTCACTGAGCTCTGCAAACTTTCTTTTCCTTGTATGGTTGTATATTCCTTGTCCCTTTTTTTAATCTAAGAGAGTGAATAGATGCGTAGAATATTGAATCTTCCAATGATAACAACATTTTTGGTAGTTCGACTATTGGATACAGTTAGCATTAACTAATTCTATTTTTCTATTTGACAGTATGTCCCACAACCATGAAACGCATCTGCAGGCAACATGGGATTTCTCGTTGGCCATCTCGAAAAATTAACAAGGTCAACCGGTCTCTCTCAAAACTAAAGCAGGTAATTGAGTCTGTTCAAGGCTCAGATGCGGCATTTAATCTCACGTCTATCACAGGTCCTCTCCCTATTCCTGTTGGACCTTCATCAGATTCTCAGAATCTAGAGAAAGCAAGTCCAAATAAAGTTGCAGAACTTTCAAATCTGGCTGTTGAGGGGGACAGAGATTCATCCTTGCAAAAGCCAATAGAAAATGACAACTTAGCTATATTGATGTCACAGCAAGGGTTTATAGATGCAAACAATAACTTGCAACTTGAAGCAGACAAAGCTTCTCACTCGAGAAGCTCATCTGGAGAAGGCAGTATAAACTCACGTACCTCAGAGGCCTCATGCCAGGGAAGTCCTGCAAACCAGACATTTGTTTGCAAGCCAATTGCATCGACGTTCGCTGAACCACAATTAATTCCAGAGGCGTTTACTAAAGAGCCCTTTCAAGAACCAGCACTACCGCTTTCCAGGATGCTCATTGAGGATTCTGGAAGTTCCAAAGATTTGAAGAATCTCTTCACTTCAGCAGTTGATCAACCATTTTTAGCACGTTCAAGCAATTTGGCGCTGATGCAAAATTCAGGGACGGTGACCATAAAGGCTAGCTTTAAGGAAGACATTGTCAGGTTCCGCTTCCCATGTTCCGGTAGCGTTACTGCATTGAAAGATGAAGTAGCCAAAAGGCTAAGGATGGATGTTGGCATGTTTGATATCAAGTATCTCGACGATGATCATGAGTGGGTGAAGTTAGCATGCAACGCGGACTTGGAAGAATGCATGGAGATCTCTGGTAGCCATGTCATCAGGCTGTTGGTTAGCGATGTTGCGGCACACCTTGGTAGTTCCTGTGGAAGCTCAGGTTGATAATTCAGGTCAGCATTTTCGTTCCATGGGTGCATACATGTTCTGCGAGGTCAGTCTCACCTGTTGTTAATCTAGTTCTCTTGCTAGATAGCAGTAGCTACTTCATTGTGTTTGATTATTGTATCAATTTTTGGTTCGAATACATGTACTTGTGCAAAACGGCACTTGTAGTCAATACTGTACATATTAAGCCCTTGGTGCTGGAAAATTCTGATGTTCAAGTTACAAAGGTTAATTGGTGTAATACTAATATCTTCGCTGTCCAGAAGTCGATTAGTTTGGAGGCACATTATTTCTTTTTCAGTTTTAATTTCCCAAGTTTTTAAGATTTTGGAGGCTCAGTTGGGTTATTCATTTTATTTGCAGCTGCATTTTCTCTAGGAAAAAACTAAGAGCATTATATGAACTTTTTCCCCCAATTTTTAAACTATTGTCAGAGAGTAGTTGCCGTCCAAAATTCAATTACAGTTGTACATTATCCGGTAAAATATTT
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| CDS seq | ATGGAGGTTGACCCATCGTCGTCTTCGCCGGGCGCGGGGGAAGGAGGAGGAGGAGGAATCGGCAGCGGGGGTGGGGATTTGTGGCCGTTCGACTCGCTCACCACGTCGCTGCTGTTCTCGTCGGTGTCGGCCTCGCCGCAGCCGCTGCCGGCCTCGTCGTCGTCGTGGCTCACGCCGCCCTCGCCGCTGTGGCTGTTCGACGAGCGCCAGCTGCTCCCGCTCGACATGGGCGCCCCCGCTGCCCCCGCCACCGCTCCGCCCGCCGAGGCCGCCGCCGTGGTCGAGGAAGTCCATCGGACCCGCTCCGGGAATTCTGACACGACTAGTAAGAGGGTTGATCAGATTAATAGCAAATGGCAGTTTCACCTATCTATTGATGATAACACGGACAGCTCATGCTTGTTTAAGGAGAGGCTTACACAGGCTCTTAGATACTTCAAGGAGTCCACAGATCAGCATCTGCTGGTTCAAGTTTGGGCACCGGTTAAGAGTGGAGACCGGTATGTGCTTACTACTTCAGGACAGCCCTTTGTACTTGACCAGCAGAGTATTGGGCTTCTTCAGTACAGGGCTGTATCCATGATGTACATGTTCTCGGTGGATGGAGAAAATGCTGGAGAGCTGGGGCTACCTGGGCGTGTGTACAAACAAAAGGTTCCTGAGTGGACACCGAATGTGCAGTATTATAGCAGTACTGAGTACCCACGCCTTAACCATGCAATCAGTTACAATGTTCATGGTACTGTAGCCTTGCCTGTTTTTGATCCTTCTGTTCAAAATTGTATTGCGGTTGTTGAACTTATAATGACATCAAAGAAGATCAACTATGCTGGTGAGGTTGATAAAGTCTGCAAAGCTCTTGAGGCAGTAAATCTCAAAAGCACTGAGATATTGGACCATCCGAATGTCCAGATATGCAATGAAGGCCGCCAATCTGCTTTGGTGGAGATACTGGAGATCTTGACGGTCGTATGTGAAGAGCACAAGCTTCCTTTGGCTCAAACCTGGGTTCCTTGCAAGTATCGAAGTGTACTGGCACATGGCGGTGGTGTTAAGAAGAGTTGTTTGAGCTTTGATGGAAGTTGCATGGGGGATGTTTGCATGTCAACCAGTGATGTGGCATTTCATGTTATCGATGCTCATATGTGGGGATTTAGAGATGCATGTGTAGAACATCACCTACAGAAGGGACAAGGAGTTTCTGGGAAGGCTTTTATCTATCGTCGACCTTGCTTTTCTAAAGATATCAGTCAATTCTGCAAGTTGGAGTATCCCCTTGTACACTATGCTCGAATGTTTGGTCTAGCTGGCTGCTTTGCAATATGTTTGCAAAGTATGTATACTGGAGATGATGATTATATATTAGAGTTCTTCCTGCCACCAAATTGCAGGAACGAAGATGATCAAAATGCCTTGTTGGAGTCCATATTAGCTCGAATGAAGAAGTGCCTTCGTACCCTAAAGGTAGTTGGCAACGGAGACACCAATGAAGTTTGTCTGCAAATAAGTAATGTGCTAATAATTGAGACTGAAGATTTGAAGACACATGTGCACTTTGAGAATTCTGAAGGTTGCTTTCGTGAATCGCCTGAAAGTAATGGAAGCCAAAGAGCCCATGAGGTTGATAATGATGGCAACAAAGTTTCAATCATGTCAGAGAGACATTTGCTAGCTGATGACAACTCTCAAAACAATGGGGCATCTGTTGGCAGGCCAAATGGTAGTGGTGCTTCTGATTCGCTTCACAAAAGTAATAAACCCCCTGAAAGGAGACGAGGAAAAGCTGAAAAAACAATCAGCTTAGACGTTCTTCAGCAATATTTCTCAGGAAGCCTAAAAAATGCAGCAAAAAGCCTTGGTGTATGTCCCACAACCATGAAACGCATCTGCAGGCAACATGGGATTTCTCGTTGGCCATCTCGAAAAATTAACAAGGTCAACCGGTCTCTCTCAAAACTAAAGCAGGTAATTGAGTCTGTTCAAGGCTCAGATGCGGCATTTAATCTCACGTCTATCACAGGTCCTCTCCCTATTCCTGTTGGACCTTCATCAGATTCTCAGAATCTAGAGAAAGCAAGTCCAAATAAAGTTGCAGAACTTTCAAATCTGGCTGTTGAGGGGGACAGAGATTCATCCTTGCAAAAGCCAATAGAAAATGACAACTTAGCTATATTGATGTCACAGCAAGGGTTTATAGATGCAAACAATAACTTGCAACTTGAAGCAGACAAAGCTTCTCACTCGAGAAGCTCATCTGGAGAAGGCAGTATAAACTCACGTACCTCAGAGGCCTCATGCCAGGGAAGTCCTGCAAACCAGACATTTGTTTGCAAGCCAATTGCATCGACGTTCGCTGAACCACAATTAATTCCAGAGGCGTTTACTAAAGAGCCCTTTCAAGAACCAGCACTACCGCTTTCCAGGATGCTCATTGAGGATTCTGGAAGTTCCAAAGATTTGAAGAATCTCTTCACTTCAGCAGTTGATCAACCATTTTTAGCACGTTCAAGCAATTTGGCGCTGATGCAAAATTCAGGGACGGTGACCATAAAGGCTAGCTTTAAGGAAGACATTGTCAGGTTCCGCTTCCCATGTTCCGGTAGCGTTACTGCATTGAAAGATGAAGTAGCCAAAAGGCTAAGGATGGATGTTGGCATGTTTGATATCAAGTATCTCGACGATGATCATGAGTGGGTGAAGTTAGCATGCAACGCGGACTTGGAAGAATGCATGGAGATCTCTGGTAGCCATGTCATCAGGCTGTTGGTTAGCGATGTTGCGGCACACCTTGGTAGTTCCTGTGGAAGCTCAGGTTGA
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| Protein seq | MEVDPSSSSPGAGEGGGGGIGSGGGDLWPFDSLTTSLLFSSVSASPQPLPASSSSWLTPPSPLWLFDERQLLPLDMGAPAAPATAPPAEAAAVVEEVHRTRSGNSDTTSKRVDQINSKWQFHLSIDDNTDSSCLFKERLTQALRYFKESTDQHLLVQVWAPVKSGDRYVLTTSGQPFVLDQQSIGLLQYRAVSMMYMFSVDGENAGELGLPGRVYKQKVPEWTPNVQYYSSTEYPRLNHAISYNVHGTVALPVFDPSVQNCIAVVELIMTSKKINYAGEVDKVCKALEAVNLKSTEILDHPNVQICNEGRQSALVEILEILTVVCEEHKLPLAQTWVPCKYRSVLAHGGGVKKSCLSFDGSCMGDVCMSTSDVAFHVIDAHMWGFRDACVEHHLQKGQGVSGKAFIYRRPCFSKDISQFCKLEYPLVHYARMFGLAGCFAICLQSMYTGDDDYILEFFLPPNCRNEDDQNALLESILARMKKCLRTLKVVGNGDTNEVCLQISNVLIIETEDLKTHVHFENSEGCFRESPESNGSQRAHEVDNDGNKVSIMSERHLLADDNSQNNGASVGRPNGSGASDSLHKSNKPPERRRGKAEKTISLDVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKQVIESVQGSDAAFNLTSITGPLPIPVGPSSDSQNLEKASPNKVAELSNLAVEGDRDSSLQKPIENDNLAILMSQQGFIDANNNLQLEADKASHSRSSSGEGSINSRTSEASCQGSPANQTFVCKPIASTFAEPQLIPEAFTKEPFQEPALPLSRMLIEDSGSSKDLKNLFTSAVDQPFLARSSNLALMQNSGTVTIKASFKEDIVRFRFPCSGSVTALKDEVAKRLRMDVGMFDIKYLDDDHEWVKLACNADLEECMEISGSHVIRLLVSDVAAHLGSSCGSSG |
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| Function | Protein NLP3 [UniProtKB/Swiss-Prot:Q5NB82] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0123700 | OsMH63_01T0123700.1 | Chr01 | 7739053 | 7744839 | + | maker | ||
| CDS seq | ATGGAGGTTGACCCATCGTCGTCTTCGCCGGGCGCGGGGGAAGGAGGAGGAGGAGGAATCGGCAGCGGGGGTGGGGATTTGTGGCCGTTCGACTCGCTCACCACGTCGCTGCTGTTCTCGTCGGTGTCGGCCTCGCCGCAGCCGCTGCCGGCCTCGTCGTCGTCGTGGCTCACGCCGCCCTCGCCGCTGTGGCTGTTCGACGAGCGCCAGCTGCTCCCGCTCGACATGGGCGCCCCCGCTGCCCCCGCCACCGCTCCGCCCGCCGAGGCCGCCGCCGTGGTCGAGGAAGTCCATCGGACCCGCTCCGGGAATTCTGACACGACTAGTAAGAGGGTTGATCAGATTAATAGCAAATGGCAGTTTCACCTATCTATTGATGATAACACGGACAGCTCATGCTTGTTTAAGGAGAGGCTTACACAGGCTCTTAGATACTTCAAGGAGTCCACAGATCAGCATCTGCTGGTTCAAGTTTGGGCACCGGTTAAGAGTGGAGACCGGTATGTGCTTACTACTTCAGGACAGCCCTTTGTACTTGACCAGCAGAGTATTGGGCTTCTTCAGTACAGGGCTGTATCCATGATGTACATGTTCTCGGTGGATGGAGAAAATGCTGGAGAGCTGGGGCTACCTGGGCGTGTGTACAAACAAAAGGTTCCTGAGTGGACACCGAATGTGCAGTATTATAGCAGTACTGAGTACCCACGCCTTAACCATGCAATCAGTTACAATGTTCATGGTACTGTAGCCTTGCCTGTTTTTGATCCTTCTGTTCAAAATTGTATTGCGGTTGTTGAACTTATAATGACATCAAAGAAGATCAACTATGCTGGTGAGGTTGATAAAGTCTGCAAAGCTCTTGAGGCAGTAAATCTCAAAAGCACTGAGATATTGGACCATCCGAATGTCCAGATATGCAATGAAGGCCGCCAATCTGCTTTGGTGGAGATACTGGAGATCTTGACGGTCGTATGTGAAGAGCACAAGCTTCCTTTGGCTCAAACCTGGGTTCCTTGCAAGTATCGAAGTGTACTGGCACATGGCGGTGGTGTTAAGAAGAGTTGTTTGAGCTTTGATGGAAGTTGCATGGGGGATGTTTGCATGTCAACCAGTGATGTGGCATTTCATGTTATCGATGCTCATATGTGGGGATTTAGAGATGCATGTGTAGAACATCACCTACAGAAGGGACAAGGAGTTTCTGGGAAGGCTTTTATCTATCGTCGACCTTGCTTTTCTAAAGATATCAGTCAATTCTGCAAGTTGGAGTATCCCCTTGTACACTATGCTCGAATGTTTGGTCTAGCTGGCTGCTTTGCAATATGTTTGCAAAGTATGTATACTGGAGATGATGATTATATATTAGAGTTCTTCCTGCCACCAAATTGCAGGAACGAAGATGATCAAAATGCCTTGTTGGAGTCCATATTAGCTCGAATGAAGAAGTGCCTTCGTACCCTAAAGGTAGTTGGCAACGGAGACACCAATGAAGTTTGTCTGCAAATAAGTAATGTGCTAATAATTGAGACTGAAGATTTGAAGACACATGTGCACTTTGAGAATTCTGAAGGTTGCTTTCGTGAATCGCCTGAAAGTAATGGAAGCCAAAGAGCCCATGAGGTTGATAATGATGGCAACAAAGTTTCAATCATGTCAGAGAGACATTTGCTAGCTGATGACAACTCTCAAAACAATGGGGCATCTGTTGGCAGGCCAAATGGTAGTGGTGCTTCTGATTCGCTTCACAAAAGTAATAAACCCCCTGAAAGGAGACGAGGAAAAGCTGAAAAAACAATCAGCTTAGACGTTCTTCAGCAATATTTCTCAGGAAGCCTAAAAAATGCAGCAAAAAGCCTTGGTGTATGTCCCACAACCATGAAACGCATCTGCAGGCAACATGGGATTTCTCGTTGGCCATCTCGAAAAATTAACAAGGTCAACCGGTCTCTCTCAAAACTAAAGCAGGTAATTGAGTCTGTTCAAGGCTCAGATGCGGCATTTAATCTCACGTCTATCACAGGTCCTCTCCCTATTCCTGTTGGACCTTCATCAGATTCTCAGAATCTAGAGAAAGCAAGTCCAAATAAAGTTGCAGAACTTTCAAATCTGGCTGTTGAGGGGGACAGAGATTCATCCTTGCAAAAGCCAATAGAAAATGACAACTTAGCTATATTGATGTCACAGCAAGGGTTTATAGATGCAAACAATAACTTGCAACTTGAAGCAGACAAAGCTTCTCACTCGAGAAGCTCATCTGGAGAAGGCAGTATAAACTCACGTACCTCAGAGGCCTCATGCCAGGGAAGTCCTGCAAACCAGACATTTGTTTGCAAGCCAATTGCATCGACGTTCGCTGAACCACAATTAATTCCAGAGGCGTTTACTAAAGAGCCCTTTCAAGAACCAGCACTACCGCTTTCCAGGATGCTCATTGAGGATTCTGGAAGTTCCAAAGATTTGAAGAATCTCTTCACTTCAGCAGTTGATCAACCATTTTTAGCACGTTCAAGCAATTTGGCGCTGATGCAAAATTCAGGGACGGTGACCATAAAGGCTAGCTTTAAGGAAGACATTGTCAGGTTCCGCTTCCCATGTTCCGGTAGCGTTACTGCATTGAAAGATGAAGTAGCCAAAAGGCTAAGGATGGATGTTGGCATGTTTGATATCAAGTATCTCGACGATGATCATGAGTGGGTGAAGTTAGCATGCAACGCGGACTTGGAAGAATGCATGGAGATCTCTGGTAGCCATGTCATCAGGCTGTTGGTTAGCGATGTTGCGGCACACCTTGGTAGTTCCTGTGGAAGCTCAGGTTGA
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| Protein seq | MEVDPSSSSPGAGEGGGGGIGSGGGDLWPFDSLTTSLLFSSVSASPQPLPASSSSWLTPPSPLWLFDERQLLPLDMGAPAAPATAPPAEAAAVVEEVHRTRSGNSDTTSKRVDQINSKWQFHLSIDDNTDSSCLFKERLTQALRYFKESTDQHLLVQVWAPVKSGDRYVLTTSGQPFVLDQQSIGLLQYRAVSMMYMFSVDGENAGELGLPGRVYKQKVPEWTPNVQYYSSTEYPRLNHAISYNVHGTVALPVFDPSVQNCIAVVELIMTSKKINYAGEVDKVCKALEAVNLKSTEILDHPNVQICNEGRQSALVEILEILTVVCEEHKLPLAQTWVPCKYRSVLAHGGGVKKSCLSFDGSCMGDVCMSTSDVAFHVIDAHMWGFRDACVEHHLQKGQGVSGKAFIYRRPCFSKDISQFCKLEYPLVHYARMFGLAGCFAICLQSMYTGDDDYILEFFLPPNCRNEDDQNALLESILARMKKCLRTLKVVGNGDTNEVCLQISNVLIIETEDLKTHVHFENSEGCFRESPESNGSQRAHEVDNDGNKVSIMSERHLLADDNSQNNGASVGRPNGSGASDSLHKSNKPPERRRGKAEKTISLDVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKQVIESVQGSDAAFNLTSITGPLPIPVGPSSDSQNLEKASPNKVAELSNLAVEGDRDSSLQKPIENDNLAILMSQQGFIDANNNLQLEADKASHSRSSSGEGSINSRTSEASCQGSPANQTFVCKPIASTFAEPQLIPEAFTKEPFQEPALPLSRMLIEDSGSSKDLKNLFTSAVDQPFLARSSNLALMQNSGTVTIKASFKEDIVRFRFPCSGSVTALKDEVAKRLRMDVGMFDIKYLDDDHEWVKLACNADLEECMEISGSHVIRLLVSDVAAHLGSSCGSSG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0123700 | OsMH63_01T0123700.2 | Chr01 | 7739062 | 7744839 | + | maker | ||
| CDS seq | ATGGAGGTTGACCCATCGTCGTCTTCGCCGGGCGCGGGGGAAGGAGGAGGAGGAGGAATCGGCAGCGGGGGTGGGGATTTGTGGCCGTTCGACTCGCTCACCACGTCGCTGCTGTTCTCGTCGGTGTCGGCCTCGCCGCAGCCGCTGCCGGCCTCGTCGTCGTCGTGGCTCACGCCGCCCTCGCCGCTGTGGCTGTTCGACGAGCGCCAGCTGCTCCCGCTCGACATGGGCGCCCCCGCTGCCCCCGCCACCGCTCCGCCCGCCGAGGCCGCCGCCGTGGTCGAGGAAGTCCATCGGACCCGCTCCGGGAATTCTGACACGACTAGTAAGAGGGTTGATCAGATTAATAGCAAATGGCAGTTTCACCTATCTATTGATGATAACACGGACAGCTCATGCTTGTTTAAGGAGAGGCTTACACAGGCTCTTAGATACTTCAAGGAGTCCACAGATCAGCATCTGCTGGTTCAAGTTTGGGCACCGGTTAAGAGTGGAGACCGGTATGTGCTTACTACTTCAGGACAGCCCTTTGTACTTGACCAGCAGAGTATTGGGCTTCTTCAGTACAGGGCTGTATCCATGATGTACATGTTCTCGGTGGATGGAGAAAATGCTGGAGAGCTGGGGCTACCTGGGCGTGTGTACAAACAAAAGGTTCCTGAGTGGACACCGAATGTGCAGTATTATAGCAGTACTGAGTACCCACGCCTTAACCATGCAATCAGTTACAATGTTCATGGTACTGTAGCCTTGCCTGTTTTTGATCCTTCTGTTCAAAATTGTATTGCGGTTGTTGAACTTATAATGACATCAAAGAAGATCAACTATGCTGGTGAGGTTGATAAAGTCTGCAAAGCTCTTGAGGCAGTAAATCTCAAAAGCACTGAGATATTGGACCATCCGAATGTCCAGATATGCAATGAAGGCCGCCAATCTGCTTTGGTGGAGATACTGGAGATCTTGACGGTCGTATGTGAAGAGCACAAGCTTCCTTTGGCTCAAACCTGGGTTCCTTGCAAGTATCGAAGTGTACTGGCACATGGCGGTGGTGTTAAGAAGAGTTGTTTGAGCTTTGATGGAAGTTGCATGGGGGATGTTTGCATGTCAACCAGTGATGTGGCATTTCATGTTATCGATGCTCATATGTGGGGATTTAGAGATGCATGTGTAGAACATCACCTACAGAAGGGACAAGGAGTTTCTGGGAAGGCTTTTATCTATCGTCGACCTTGCTTTTCTAAAGATATCAGTCAATTCTGCAAGTTGGAGTATCCCCTTGTACACTATGCTCGAATGTTTGGTCTAGCTGGCTGCTTTGCAATATGTTTGCAAAGTATGTATACTGGAGATGATGATTATATATTAGAGTTCTTCCTGCCACCAAATTGCAGGAACGAAGATGATCAAAATGCCTTGTTGGAGTCCATATTAGCTCGAATGAAGAAGTGCCTTCGTACCCTAAAGGTAGTTGGCAACGGAGACACCAATGAAGTTTGTCTGCAAATAAGTAATGTGCTAATAATTGAGACTGAAGATTTGAAGACACATGTGCACTTTGAGAATTCTGAAGGTTGCTTTCGTGAATCGCCTGAAAGTAATGGAAGCCAAAGAGCCCATGAGGTTGATAATGATGGCAACAAAGTTTCAATCATGTCAGAGAGACATTTGCTAGCTGATGACAACTCTCAAAACAATGGGGCATCTGTTGGCAGGCCAAATGGTAGTGGTGCTTCTGATTCGCTTCACAAAAGTAATAAACCCCCTGAAAGGAGACGAGGAAAAGCTGAAAAAACAATCAGCTTAGACGTTCTTCAGCAATATTTCTCAGGAAGCCTAAAAAATGCAGCAAAAAGCCTTGGTGGTATGACTAGTATTTGA
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| Protein seq | MEVDPSSSSPGAGEGGGGGIGSGGGDLWPFDSLTTSLLFSSVSASPQPLPASSSSWLTPPSPLWLFDERQLLPLDMGAPAAPATAPPAEAAAVVEEVHRTRSGNSDTTSKRVDQINSKWQFHLSIDDNTDSSCLFKERLTQALRYFKESTDQHLLVQVWAPVKSGDRYVLTTSGQPFVLDQQSIGLLQYRAVSMMYMFSVDGENAGELGLPGRVYKQKVPEWTPNVQYYSSTEYPRLNHAISYNVHGTVALPVFDPSVQNCIAVVELIMTSKKINYAGEVDKVCKALEAVNLKSTEILDHPNVQICNEGRQSALVEILEILTVVCEEHKLPLAQTWVPCKYRSVLAHGGGVKKSCLSFDGSCMGDVCMSTSDVAFHVIDAHMWGFRDACVEHHLQKGQGVSGKAFIYRRPCFSKDISQFCKLEYPLVHYARMFGLAGCFAICLQSMYTGDDDYILEFFLPPNCRNEDDQNALLESILARMKKCLRTLKVVGNGDTNEVCLQISNVLIIETEDLKTHVHFENSEGCFRESPESNGSQRAHEVDNDGNKVSIMSERHLLADDNSQNNGASVGRPNGSGASDSLHKSNKPPERRRGKAEKTISLDVLQQYFSGSLKNAAKSLGGMTSI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0123700 | OsMH63_01T0123700.3 | Chr01 | 7739062 | 7744839 | + | maker | ||
| CDS seq | ATGGAGGTTGACCCATCGTCGTCTTCGCCGGGCGCGGGGGAAGGAGGAGGAGGAGGAATCGGCAGCGGGGGTGGGGATTTGTGGCCGTTCGACTCGCTCACCACGTCGCTGCTGTTCTCGTCGGTGTCGGCCTCGCCGCAGCCGCTGCCGGCCTCGTCGTCGTCGTGGCTCACGCCGCCCTCGCCGCTGTGGCTGTTCGACGAGCGCCAGCTGCTCCCGCTCGACATGGGCGCCCCCGCTGCCCCCGCCACCGCTCCGCCCGCCGAGGCCGCCGCCGTGGTCGAGGAAGTCCATCGGACCCGCTCCGGGAATTCTGACACGACTAGTAAGAGGGTTGATCAGATTAATAGCAAATGGCAGTTTCACCTATCTATTGATGATAACACGGACAGCTCATGCTTGTTTAAGGAGAGGCTTACACAGGCTCTTAGATACTTCAAGGAGTCCACAGATCAGCATCTGCTGGTTCAAGTTTGGGCACCGGTTAAGAGTGGAGACCGGTATGTGCTTACTACTTCAGGACAGCCCTTTGTACTTGACCAGCAGAGTATTGGGCTTCTTCAGTACAGGGCTGTATCCATGATGTACATGTTCTCGGTGGATGGAGAAAATGCTGGAGAGCTGGGGCTACCTGGGCGTGTGTACAAACAAAAGGTTCCTGAGTGGACACCGAATGTGCAGTATTATAGCAGTACTGAGTACCCACGCCTTAACCATGCAATCAGTTACAATGTTCATGGTACTGTAGCCTTGCCTGTTTTTGATCCTTCTGTTCAAAATTGTATTGCGGTTGTTGAACTTATAATGACATCAAAGAAGATCAACTATGCTGGTGAGGTTGATAAAGTCTGCAAAGCTCTTGAGGCAGTAAATCTCAAAAGCACTGAGATATTGGACCATCCGAATGTCCAGATATGCAATGAAGGCCGCCAATCTGCTTTGGTGGAGATACTGGAGATCTTGACGGTCGTATGTGAAGAGCACAAGCTTCCTTTGGCTCAAACCTGGGTTCCTTGCAAGTATCGAAGTGTACTGGCACATGGCGGTGGTGTTAAGAAGAGTTGTTTGAGCTTTGATGGAAGTTGCATGGGGGATGTTTGCATGTCAACCAGTGATGTGGCATTTCATGTTATCGATGCTCATATGTGGGGATTTAGAGATGCATGTGTAGAACATCACCTACAGAAGGGACAAGGAGTTTCTGGGAAGGCTTTTATCTATCGTCGACCTTGCTTTTCTAAAGATATCAGTCAATTCTGCAAGTTGGAGTATCCCCTTGTACACTATGCTCGAATGTTTGGTCTAGCTGGCTGCTTTGCAATATGTTTGCAAAGTATGTATACTGGAGATGATGATTATATATTAGAGTTCTTCCTGCCACCAAATTGCAGGAACGAAGATGATCAAAATGCCTTGTTGGAGTCCATATTAGCTCGAATGAAGAAGTGCCTTCGTACCCTAAAGGTAGTTGGCAACGGAGACACCAATGAAGTTTGTCTGCAAATAAGTAATGTGCTAATAATTGAGACTGAAGATTTGAAGACACATGTGCACTTTGAGAATTCTGAAGGTTGCTTTCGTGAATCGCCTGAAAGTAATGGAAGCCAAAGAGCCCATGAGGTTGATAATGATGGCAACAAAGTTTCAATCATGTCAGAGAGACATTTGCTAGCTGATGACAACTCTCAAAACAATGGGGCATCTGTTGGCAGGCCAAATGGTAGTGGTGCTTCTGATTCGCTTCACAAAAGTAATAAACCCCCTGAAAGGAGACGAGGAAAAGCTGAAAAAACAATCAGCTTAGACGTTCTTCAGCAATATTTCTCAGGAAGCCTAAAAAATGCAGCAAAAAGCCTTGGTGTATGTCCCACAACCATGAAACGCATCTGCAGGCAACATGGGATTTCTCGTTGGCCATCTCGAAAAATTAACAAGGTCCTCTCCCTATTCCTGTTGGACCTTCATCAGATTCTCAGAATCTAG
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| Protein seq | MEVDPSSSSPGAGEGGGGGIGSGGGDLWPFDSLTTSLLFSSVSASPQPLPASSSSWLTPPSPLWLFDERQLLPLDMGAPAAPATAPPAEAAAVVEEVHRTRSGNSDTTSKRVDQINSKWQFHLSIDDNTDSSCLFKERLTQALRYFKESTDQHLLVQVWAPVKSGDRYVLTTSGQPFVLDQQSIGLLQYRAVSMMYMFSVDGENAGELGLPGRVYKQKVPEWTPNVQYYSSTEYPRLNHAISYNVHGTVALPVFDPSVQNCIAVVELIMTSKKINYAGEVDKVCKALEAVNLKSTEILDHPNVQICNEGRQSALVEILEILTVVCEEHKLPLAQTWVPCKYRSVLAHGGGVKKSCLSFDGSCMGDVCMSTSDVAFHVIDAHMWGFRDACVEHHLQKGQGVSGKAFIYRRPCFSKDISQFCKLEYPLVHYARMFGLAGCFAICLQSMYTGDDDYILEFFLPPNCRNEDDQNALLESILARMKKCLRTLKVVGNGDTNEVCLQISNVLIIETEDLKTHVHFENSEGCFRESPESNGSQRAHEVDNDGNKVSIMSERHLLADDNSQNNGASVGRPNGSGASDSLHKSNKPPERRRGKAEKTISLDVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKVLSLFLLDLHQILRI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 26.2087155 | 25.8580425 | 10.1569175 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0236700 | RBH | 12.563909 | 9.738335 | 10.583531 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g13540 | RBH | 4.566227 | 3.977622 | 1.331220 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0236700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0009810 | RBH | 3.987525 | 27.196323 | 5.905515 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0009450 | RBH | 2.872878 | 9.332595 | 2.392307 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0009790 | RBH | 5.564020 | 23.008135 | 9.923021 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0009340 | RBH | 1.016436 | 0.948431 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0009370 | RBH | 40.279549 | 44.853237 | 17.308237 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0009380 | RBH | 1.818937 | 2.115136 | 1.480305 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0123200 | RBH | 39.6031065 | 12.5630545 | 14.8496395 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0007930 | RBH | 2.347562 | 0.552984 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0009400 | RBH | 5.451746 | 40.217758 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0009370 | RBH | 39.664204 | 49.926922 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0009490 | RBH | 6.590407 | 2.833010 | 2.206016 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0009300 | RBH | 2.136061 | 11.401522 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G009440 | RBH | 4.152809 | 7.210025 | 4.808507 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0009330 | RBH | 9.847730 | 38.418716 | 10.396140 |
| Os XI: R9311 | R9311 | AGIS | R9311C01g01110 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_01g0107700 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_01g0107600 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_01g0105700 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_01g0103100 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0100330100.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0100918500.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_001026 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0100921900.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0100808500.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0100330900.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0100319500.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0100227900.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0100327100.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0100330300.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0100319700.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0100314300.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0100833100.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0100315700.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0100317700.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0100261100.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0100325700.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0100313100.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0100324300.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0100502100.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0100586900.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0101424300.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0100319300.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0100308300.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0100312900.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0100318300.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0100313700.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0100401500.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0100317300.01 | RBH | None | None | None |
