Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| R9311C01g01127 | OGI:01024100 | 50/50 | Os XI: R9311 | R9311 | AGIS | Chr01:7758368-7764513 | ||||||||
| Gene Symbol | OsGLK2,GLK2,OsGlk2 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | OglaRS2_R9311_OTH0111450,OglaRS2_R9311_OTH0111460,127564_R9311_OTH0104550, |
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| DNA seq | TCAGCCGGCGGCACCGCTCGCCGCCGGTGGCACCTTGGGGATGCCCTGCTTGTGCAGCTCAGACATGACGCTGTCCAGCGACGGTGGCTTGAGGCCGAGGGGAAGCGGCAGCCATGGCTTCACTAAAACATCTCCGATGGCTGCGTCTATGCTCTCCTTAGACTGCAACCGAGACAAAATTAAACATACATATACACATGCCGGAGCAACAAAACTAATAAAAATTCATCCGATCAGCTAGCGTGGTTTAGGTTTGTTTGACATAGCTTCGGACCCGAGATTTCTTAGAGATAAGTGTTCCTTCAATGAATCTGAATCTATGATAAATAATTTTACTTTAGAGAGAATATATAGAATTTTAAATTACTATAATTTCCTAACCCAACATATATCTAGAACCTGGAGTTGTGCTAAATAGGTCTTATTAGAACACATTCTTTGTATTACTCTCTTATTCCGAAAGTCTAAGTCCTATTTCTTTTTCACCAAGACCAAGAAGCAATTAATTCATTCACCATATGACAAACCAATGAATATGCAACCCATAAACACTAAAATGGCTTCTTGGGTTCCTATCAACAATTTAATTTAACACATAATGACTATAAATAGAACCTAGACTTTAAAAAAAATCAAAAAATGAAATAAGTCTTAGACTTTTGGAAGGAGAGAGTACTTTCTATGTAGATAAGCACAATTTGAATGCTATTAAATATTATGAAGACGTTAATCAATGGATTTTATTTTTAGCATCCATCTGTTTAACAGTTTAAGCGTGTGTTAAAGAAAAAAAAAGCGAAGTGCATATATACTTACCGGGTGGGCATCAAGCTGAAGCTGCAAGGCAGCGAGTTTATTCCCCTGCGGCGGTGACGGCGGCGGTATCGGTCTGTACATGGGGTGCGGCACCATTCCAGGCACCGGCGGTACAGGAAACCTCTGCAACTGTACATAACACATACACCAGCCAAAAATATATAAGCATTTAAAATTTATCTAAGAATATAAGTATTAGAAGCACTTGAAATTTGTTGACAAATATAAGGATCCATTAAGTACTGCTTATCTTATTATTCACTTCTCATTTAAATTTTTCCAATTCTCTTCATGAATACTTATATTTATGTACGAAGAGAGCACTCTTAATTTATAAGAAGTTCAATGGTTTGTTTCTAATTAATAGCATATAATTTCTCTGTCCAATAAAATCGAACCTCTAACTATATATATCTGATAACATACTATATCCATATATATAATTAGAGGTTGATTTTTTTTAAGTGGGAGGAGTGCTCCATACTACCCTGTCGAAAAAAACTTAAATCATCTAGATATATGTGTCTAGATTTATCCCTAAGATTTAAATCTTTTTATTATAGGAAGTAGATTTATAGTATTGGGATGTTAATAACATACTTAGATTAACTTATTTTTACTTTGCTTGAAATTACCATGGCGGCTGGAGGCAACGGTGGCGGCATACACGGCGTCCCCGGTGTCACTGCCTGCGGGCCCCACTTCCTCGCCGCCTGCATATGCATGCATGAAAACCCCAGGCGTCAACTCATCAGATTAAAGTTCACACAACATATGCAGGCAGCCAAAGCGAGCAAAGCATCACTGGAAAAGCAAGCTATAAGCTAGTGTCACATGCACGATACTACGTCACAGAGGAAACAGTTTTTTTTTCCTTTTTTTTCGTACGCACGTTATACTGTTGCTGCCAGTACGCCGCCGGGTCCACCGGCGCCGGCTGGTGGCCGTGCGCCCACGCCGCCGGCAGCGGCGGCGGCGGCGGCGCCAGGTGGCGCGGCCAGACGGGCAGCAACGGCGGCTGCGCGTGCGGCGAGGGTGGTGGTGGCGCCGCCGCGGTGGTCGGCTCGACGCCGGCGGTCGGGTGGCCCCACACGTGCAGCGGCGGCCGGCAGAACGGTGGAGGGTGCGGCGGGGGAGGCACCATCGCCGCCGCGTGCGGCGGAGGGAAACCGATGGTCGGCATGACCCACGGGGCCACCGCCGCAGTGGCGGCGGCGGCGTCCTTCCTTGGCCCGCCGCCGGCTGCCACCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGTACATCTGCCGCTTCTGCGTCCAGCTCGCCGCCTCCGCCTCCCTCGCCATCAGATGTTTCCTGTGCGACCGATATTTCTGCACGCAGTACACGCACAAATGCACAATATTAACTACTAGTACTAACTCACAAATACACAGTATGTATCAGCTCAGCTGCTACCGCATAATTGTTTTATCGGGAATGCTGCATGATTTTTGATTGCTAAATCATTCATATTTCAATATATTTAGAACCGTGGTTTCATATATTGTAGCAAAATGTTTCACGAGATGATTTAATTGTGTTTTAACTTTTAAAAAGATTGAAACATGTTTGATCTACTTGGTGAAACATTTACGGCGTTTCAGCTTTTTAAAAGATTAAAACATTTTCGATCTACTTGGTGAAATATTTTTTTATCTACTTGGTGAAACATTCAGAACCGTTGTTTCATATGTTGTAGCAAAATGTTTCATGGGGTGATTTCATTGTATTCCAGTTTTTTTAAAAGATTGAAACATTTTCGATCTATTTGATGAAACATTTTTGATCTACTTAGTGAAACACTGCATGATGAAAGACTAAAAAATCATGCGAATCCCATGTAGACAGTCTCTTGTTTTATTTAGGTAGCTGCCGCATAATTGTTAAACCAACATTTTATTACGTACAAGGGGTTGTTCATATTGACACCATTTTAAATCATTTCATTTTTTTTTAAAATAAAGTTGTCAAATATGTATATCCGTTTAGTTTTTTACAATACTCTAGTAAATACATAAGAACGTTCTTCTATTTTCCTTCTCTTAAAAAAAACTTAGTAAATATATAAGAAATCCTATAAATTTGGTAATATTTGACAAGGTTTTTTTTACTACAATCTAAACATTCCCCAAGTTCCGACAAAAGCACCAGTATCATAAAAAGACTAACTTTTCAAGTTTAAAGCGAGAATTTCGTTAAATAAATATTACCCGGTCTTCCGCAAATGTCCTCTGGCTAGTTACTGCTGTATCAGTTTAAAAATATAAAGTATTTTGAGGATTTAAAGTTTATATCACACTATTTTATATCACACTATAAACATACAATTATAATGTTTATATTCGCAGAGGTAACACGACTTCGTCGGAGGTAAGTACTAGTAGCCATTAGCTGGTTACCGGATCGGAGGTGACAAAACGACGCAAACAAAGCTAGCGGGCAGCGGTGGAGCATGCGGGGACGACCGTGGCAGTGGCGGCTTGTGGCGTGGCGACTACTCGGCTTTGGCGCGTCGCCGTTGCACGGTTTGAGCCAGGGGAATAATATCCTATTCCTAGCTTTAGCTTGGATACGATGCGAGTCTGGCTAGCCTTGCCTCCCTGCTTCTGCTTGCCCTCTGCACCCGCATGCAGTACTACTGCTGCCTGCCTAGCTATACTTGTTTGCTTGCATGCATGCATTTGCTCGTCTTTAAAGGCCTTTTAACCTTCAGTTACTAGCTCAGCATGCAGCACCTGGTAAAAAAAAACTTGACATTCCTAGCTACTGCTTCGTGCGAGATGGTGCGGTAAAAAACGAAGATGCACATGCAATTGTTTTGGCTCAAAACGCTTGCTTAATTAGTTGCTACTATAGCACTCTCAAATTAAGATGCGAATGGTTTGTTTGATCAAAACTGAAAATGATTGGTATACTACATTAACTAGTACCACCTCTACATCCTATAAAAAACATGATCCTATTATTCTACCTACGAAGAACCTGGACCATGCTCAGGTTTATAGTAATTAGGATCGAATTTTTTTTTAAGGACGAAGTAGTATGTTATTGTAGGGTGCCATGAGTTCTTGGTTGACTCAAGGGATCGAGTAAATATTAATAATTCATGCTGCGGTGCAGTAACTCGTACTCGCTACTACGATACGTACATCAGGGCTACTGGCGTCGTTTGTCGCGGCGCCAGTTTTTGGACAATGCTCCCTGTACTATGTTCCTCCCAGATCTAAGCCTGACAGTGTCACAACCCACAAAATGTATAGATGTACTGTATAATATTACTAGCATATTATACTCCTAGTACTCTATATAAATTTAAGAACGAACTTTTTCGTGTGCAAGGCCATATATACAAGTACAAGAGTGTTTTTCGTTCGCCTCTGAAAGACATGCCTCTTTTAATTAACTGTGCTGAAGAACCTCGTATGTATTAAGAGAGAGAAAATCTATCAAAATTATATTATAACCTAGTATGTATGACCTAGTACTGGATATAGTGAAATTAATATATATAGACCTGGAGATGGCTGGCGATGTTGTGGCGAGTGAGGCACTCGATGCCCATGAGCTCCAGGATCCTGGACGGCACGGCCTTGTCTATCCCGAGCTGCTCCACCGCCTGCACGAACCGCCGGTGCAACTCCGGCGTCCAGTCCACCTGCAACACATATCCACCAATCCATCATCGATCCATATCCTTCTCAAAACCACATCCACTAATTAATCTCTTGTAATATCACTGTGCCTGCCTACACCTACATGTCATCTCTGCTACTGCATGCGCAGCTAGCTAGCAACAGTGGCCATTTGGCCACTGCAGACGATCGATCGAGAGATCGACAGGACTGCACGAGCAATCGAGAGACGTACTCTCTGTGCATGTGTCTGTGCTGGTGTGGTCTAGCTAGCTACTATACAGTATACACCCACTCTATCCATGACTAGCTATATGAATACTGTATGAGCCTTCCCGTGAGCGCGCACGGCCCTCTCCTCCCCGAGATCTATCCTGCGAATCCATCGCCTCTCTTCGTCGGTACGGTGTATAGTAGCGAGCGTTCGATCCATCCGTAAAAGGCTTACTCCTACACGGGGATTTCCGCGCCCTATTCATTGCTTGCCCCCACGTACGTACGCTCCGCCTCCGCGCCCAGACGCGCGCCCGCAGCCGCGCAGGCAGGCTAACATGTGTGTGCGCGTCTGTGCGGATTGCCCCCCTCCTCTCCTCGTGACGCGTCGTCCGTCGTGCATGGCGCTAGCAGCAGCCGCAGCAGCAGCGCGCAGCGTGTGGTTTGGATCTGCCTCGCTCTGTCTAGAACTATACTAGTAATTTGAATCTGCTGCAGGACGCTGCTAGTTTGTTGCCTTCTGCATGCCCGTTCGTCTGTATATCAGTCAGATCTGCTCGTCAGAGAGAGAAAAAAAATTATATGTGCAGTATGATTAGTTTGAGCTTGGGGTGATTGACTGTTAATTGTATCTGTCATCTGAGCTGATCGAGGAGTTAATTCTGATGCCGTTTTGATTTTTTTTTTTGTCTTTTCTTTTCCCCTCTGTGTGGTAGAGCTAGCTGTGTGTGTGCGCGCGCGCATGGTGTTCGATAAAATAGTTATAATTAGGGCTGAAGTGTTAGTTGTGTGGTTGGTAGTAGGGATATACCTTCACCTTGCGCTTGCCGTGAGAGTTCTTGCCGGCCGCCGCCGATGACGACGACGACGACGGCTTCCTCTTGCTGTGGCCCTCTGCCGACGGCGAGCACGACTTGGCGGCGCCGGCCGAGGAATCCTCCGTCGTCACCGCGCTCAGGACCTCGTCGCCGCCGCCGTTCTTCGCGTCTTTCTCCTCCGGCAACGACGACGACCTTTCCTCGTCGTCCTTCTTCTTCTTCCCCCGCGGTGGCGGCGGCGACCCGTCGTAGTCAGCGGCGGCGGCGGCGGCGGCGGCTCCATCTTCCTTCACGTCTTCCTTGGCTCCTGCAGCAGCAGCTGGCTCGCCGGGGCCCGGAGCCGACGTCGTCGGCGGCGGCTCGTCGTCCGGGGAGCTGGCGAACTCGGCGAGGAGCTCCGTGGGGTCGACCTCGAGGTCCGGGAGGATGTCGCCGTCGTCGGCGTGGAAGAACGGCACGTCGCAGCAGCTGAAGTCGATGTACTCGAGCAGGCAGCTGTCGTCGACGATGAACGCGTCGACCTCGTCGGCGACGTCGGCCGGCGACGGCGGCGCCGGGACGAAGCCGACGACATGGTGGCCGCCGACGCCCGCCCGCTGATCCGCCTTAGGGCTTCGCAGCGTGGACACCTCAAGCAT
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| CDS seq | ATGCTTGAGGTGTCCACGCTGCGAAGCCCTAAGGCGGATCAGCGGGCGGGCGTCGGCGGCCACCATGTCGTCGGCTTCGTCCCGGCGCCGCCGTCGCCGGCCGACGTCGCCGACGAGGTCGACGCGTTCATCGTCGACGACAGCTGCCTGCTCGAGTACATCGACTTCAGCTGCTGCGACGTGCCGTTCTTCCACGCCGACGACGGCGACATCCTCCCGGACCTCGAGGTCGACCCCACGGAGCTCCTCGCCGAGTTCGCCAGCTCCCCGGACGACGAGCCGCCGCCGACGACGTCGGCTCCGGGCCCCGGCGAGCCAGCTGCTGCTGCAGGAGCCAAGGAAGACGTGAAGGAAGATGGAGCCGCCGCCGCCGCCGCCGCCGCTGACTACGACGGGTCGCCGCCGCCACCGCGGGGGAAGAAGAAGAAGGACGACGAGGAAAGGTCGTCGTCGTTGCCGGAGGAGAAAGACGCGAAGAACGGCGGCGGCGACGAGGTCCTGAGCGCGGTGACGACGGAGGATTCCTCGGCCGGCGCCGCCAAGTCGTGCTCGCCGTCGGCAGAGGGCCACAGCAAGAGGAAGCCGTCGTCGTCGTCGTCATCGGCGGCGGCCGGCAAGAACTCTCACGGCAAGCGCAAGGTGAAGGTGGACTGGACGCCGGAGTTGCACCGGCGGTTCGTGCAGGCGGTGGAGCAGCTCGGGATAGACAAGGCCGTGCCGTCCAGGATCCTGGAGCTCATGGGCATCGAGTGCCTCACTCGCCACAACATCGCCAGCCATCTCCAGAAATATCGGTCGCACAGGAAACATCTGATGGCGAGGGAGGCGGAGGCGGCGAGCTGGACGCAGAAGCGGCAGATGTACACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGGTGGCAGCCGGCGGCGGGCCAAGGAAGGACGCCGCCGCCGCCACTGCGGCGGTGGCCCCGTGGGTCATGCCGACCATCGGTTTCCCTCCGCCGCACGCGGCGGCGATGGTGCCTCCCCCGCCGCACCCTCCACCGTTCTGCCGGCCGCCGCTGCACGTGTGGGGCCACCCGACCGCCGGCGTCGAGCCGACCACCGCGGCGGCGCCACCACCACCCTCGCCGCACGCGCAGCCGCCGTTGCTGCCCGTCTGGCCGCGCCACCTGGCGCCGCCGCCGCCGCCGCTGCCGGCGGCGTGGGCGCACGGCCACCAGCCGGCGCCGGTGGACCCGGCGGCGTACTGGCAGCAACAGTATAACGCGGCGAGGAAGTGGGGCCCGCAGGCAGTGACACCGGGGACGCCGTGTATGCCGCCACCGTTGCCTCCAGCCGCCATGTTGCAGAGGTTTCCTGTACCGCCGGTGCCTGGAATGGTGCCGCACCCCATGTACAGACCGATACCGCCGCCGTCACCGCCGCAGGGGAATAAACTCGCTGCCTTGCAGCTTCAGCTTGATGCCCACCCGTCTAAGGAGAGCATAGACGCAGCCATCGGAGATGTTTTAGTGAAGCCATGGCTGCCGCTTCCCCTCGGCCTCAAGCCACCGTCGCTGGACAGCGTCATGTCTGAGCTGCACAAGCAGGGCATCCCCAAGGTGCCACCGGCGGCGAGCGGTGCCGCCGGCTGA
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| Protein seq | MLEVSTLRSPKADQRAGVGGHHVVGFVPAPPSPADVADEVDAFIVDDSCLLEYIDFSCCDVPFFHADDGDILPDLEVDPTELLAEFASSPDDEPPPTTSAPGPGEPAAAAGAKEDVKEDGAAAAAAAADYDGSPPPPRGKKKKDDEERSSSLPEEKDAKNGGGDEVLSAVTTEDSSAGAAKSCSPSAEGHSKRKPSSSSSSAAAGKNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKHLMAREAEAASWTQKRQMYTAAAAAAAAAAVAAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAAMVPPPPHPPPFCRPPLHVWGHPTAGVEPTTAAAPPPPSPHAQPPLLPVWPRHLAPPPPPLPAAWAHGHQPAPVDPAAYWQQQYNAARKWGPQAVTPGTPCMPPPLPPAAMLQRFPVPPVPGMVPHPMYRPIPPPSPPQGNKLAALQLQLDAHPSKESIDAAIGDVLVKPWLPLPLGLKPPSLDSVMSELHKQGIPKVPPAASGAAG |
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| Function | Probable transcription factor GLK2 [UniProtKB/Swiss-Prot:Q5NAN5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| R9311C01g01127 | R9311C01g01127.t1 | Chr01 | 7758368 | 7764513 | - | GenePre | ||
| CDS seq | ATGCTTGAGGTGTCCACGCTGCGAAGCCCTAAGGCGGATCAGCGGGCGGGCGTCGGCGGCCACCATGTCGTCGGCTTCGTCCCGGCGCCGCCGTCGCCGGCCGACGTCGCCGACGAGGTCGACGCGTTCATCGTCGACGACAGCTGCCTGCTCGAGTACATCGACTTCAGCTGCTGCGACGTGCCGTTCTTCCACGCCGACGACGGCGACATCCTCCCGGACCTCGAGGTCGACCCCACGGAGCTCCTCGCCGAGTTCGCCAGCTCCCCGGACGACGAGCCGCCGCCGACGACGTCGGCTCCGGGCCCCGGCGAGCCAGCTGCTGCTGCAGGAGCCAAGGAAGACGTGAAGGAAGATGGAGCCGCCGCCGCCGCCGCCGCCGCTGACTACGACGGGTCGCCGCCGCCACCGCGGGGGAAGAAGAAGAAGGACGACGAGGAAAGGTCGTCGTCGTTGCCGGAGGAGAAAGACGCGAAGAACGGCGGCGGCGACGAGGTCCTGAGCGCGGTGACGACGGAGGATTCCTCGGCCGGCGCCGCCAAGTCGTGCTCGCCGTCGGCAGAGGGCCACAGCAAGAGGAAGCCGTCGTCGTCGTCGTCATCGGCGGCGGCCGGCAAGAACTCTCACGGCAAGCGCAAGGTGAAGGTGGACTGGACGCCGGAGTTGCACCGGCGGTTCGTGCAGGCGGTGGAGCAGCTCGGGATAGACAAGGCCGTGCCGTCCAGGATCCTGGAGCTCATGGGCATCGAGTGCCTCACTCGCCACAACATCGCCAGCCATCTCCAGAAATATCGGTCGCACAGGAAACATCTGATGGCGAGGGAGGCGGAGGCGGCGAGCTGGACGCAGAAGCGGCAGATGTACACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGGTGGCAGCCGGCGGCGGGCCAAGGAAGGACGCCGCCGCCGCCACTGCGGCGGTGGCCCCGTGGGTCATGCCGACCATCGGTTTCCCTCCGCCGCACGCGGCGGCGATGGTGCCTCCCCCGCCGCACCCTCCACCGTTCTGCCGGCCGCCGCTGCACGTGTGGGGCCACCCGACCGCCGGCGTCGAGCCGACCACCGCGGCGGCGCCACCACCACCCTCGCCGCACGCGCAGCCGCCGTTGCTGCCCGTCTGGCCGCGCCACCTGGCGCCGCCGCCGCCGCCGCTGCCGGCGGCGTGGGCGCACGGCCACCAGCCGGCGCCGGTGGACCCGGCGGCGTACTGGCAGCAACAGTATAACGCGGCGAGGAAGTGGGGCCCGCAGGCAGTGACACCGGGGACGCCGTGTATGCCGCCACCGTTGCCTCCAGCCGCCATGTTGCAGAGGTTTCCTGTACCGCCGGTGCCTGGAATGGTGCCGCACCCCATGTACAGACCGATACCGCCGCCGTCACCGCCGCAGGGGAATAAACTCGCTGCCTTGCAGCTTCAGCTTGATGCCCACCCGTCTAAGGAGAGCATAGACGCAGCCATCGGAGATGTTTTAGTGAAGCCATGGCTGCCGCTTCCCCTCGGCCTCAAGCCACCGTCGCTGGACAGCGTCATGTCTGAGCTGCACAAGCAGGGCATCCCCAAGGTGCCACCGGCGGCGAGCGGTGCCGCCGGCTGA
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| Protein seq | MLEVSTLRSPKADQRAGVGGHHVVGFVPAPPSPADVADEVDAFIVDDSCLLEYIDFSCCDVPFFHADDGDILPDLEVDPTELLAEFASSPDDEPPPTTSAPGPGEPAAAAGAKEDVKEDGAAAAAAAADYDGSPPPPRGKKKKDDEERSSSLPEEKDAKNGGGDEVLSAVTTEDSSAGAAKSCSPSAEGHSKRKPSSSSSSAAAGKNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKHLMAREAEAASWTQKRQMYTAAAAAAAAAAVAAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAAMVPPPPHPPPFCRPPLHVWGHPTAGVEPTTAAAPPPPSPHAQPPLLPVWPRHLAPPPPPLPAAWAHGHQPAPVDPAAYWQQQYNAARKWGPQAVTPGTPCMPPPLPPAAMLQRFPVPPVPGMVPHPMYRPIPPPSPPQGNKLAALQLQLDAHPSKESIDAAIGDVLVKPWLPLPLGLKPPSLDSVMSELHKQGIPKVPPAASGAAG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| R9311C01g01127 | R9311C01g01127.t2 | Chr01 | 7763839 | 7764513 | - | GenePre | ||
| CDS seq | ATGCTTGAGGTGTCCACGCTGCGAAGCCCTAAGGCGGATCAGCGGGCGGGCGTCGGCGGCCACCATGTCGTCGGCTTCGTCCCGGCGCCGCCGTCGCCGGCCGACGTCGCCGACGAGGTCGACGCGTTCATCGTCGACGACAGCTGCCTGCTCGAGTACATCGACTTCAGCTGCTGCGACGTGCCGTTCTTCCACGCCGACGACGGCGACATCCTCCCGGACCTCGAGGTCGACCCCACGGAGCTCCTCGCCGAGTTCGCCAGCTCCCCGGACGACGAGCCGCCGCCGACGACGTCGGCTCCGGGCCCCGGCGAGCCAGCTGCTGCTGCAGGAGCCAAGGAAGACGTGAAGGAAGATGGAGCCGCCGCCGCCGCCGCCGCCGCTGACTACGACGGGTCGCCGCCGCCACCGCGGGGGAAGAAGAAGAAGGACGACGAGGAAAGGTCGTCGTCGTTGCCGGAGGAGAAAGACGCGAAGAACGGCGGCGGCGACGAGGTCCTGAGCGCGGTGACGACGGAGGATTCCTCGGCCGGCGCCGCCAAGTCGTGCTCGCCGTCGGCAGAGGGCCACAGCAAGAGGAAGCCGTCGTCGTCGTCGTCATCGGCGGCGGCCGGCAAGAACTCTCACGGCAAGCGCAAGGTGAAGGTATATCCCTACTACCAACCACACAACTAA
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| Protein seq | MLEVSTLRSPKADQRAGVGGHHVVGFVPAPPSPADVADEVDAFIVDDSCLLEYIDFSCCDVPFFHADDGDILPDLEVDPTELLAEFASSPDDEPPPTTSAPGPGEPAAAAGAKEDVKEDGAAAAAAAADYDGSPPPPRGKKKKDDEERSSSLPEEKDAKNGGGDEVLSAVTTEDSSAGAAKSCSPSAEGHSKRKPSSSSSSAAAGKNSHGKRKVKVYPYYQPHN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0239000 | RBH | 6.714567 | 6.894914 | 6.640237 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g13740 | RBH | 4.683152 | 4.178427 | 1.383557 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0239000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0009980 | RBH | 4.219803 | 0.0 | 5.177682 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0009620 | RBH | 1.655530 | 0.0 | 7.046511 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0009960 | RBH | 4.668834 | 0.0 | 6.927829 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0009490 | RBH | 0.987238 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0009510 | RBH | 50.493351 | 1.640427 | 14.896873 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0126200 | RBH | 43.8806455 | 0.0368935 | 2.0231365 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0009510 | RBH | 1.669263 | 0.0 | 0.989044 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0125700 | RBH | 37.574564 | 0.0320205 | 10.384334 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0007780 | RBH | 3.198294 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0009540 | RBH | 4.386060 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0009510 | RBH | 54.735195 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0009630 | RBH | 8.022839 | 0.0 | 5.510570 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0009440 | RBH | 1.583754 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G009580 | RBH | 3.336635 | 0.0 | 2.526820 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0009470 | RBH | 10.649267 | 0.0 | 14.320371 |
| Os XI: R9311 | R9311 | AGIS | NA | NA | NA | NA | NA |
| Os XI-adm: HZ | HZ | PKU | OsHZ_01g0109900 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_01g0109700 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_01g0107600 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_01g0105400 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0100335600.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0100931200.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_001041 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0100937200.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0100824400.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0100337200.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0100324800.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0100231200.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0100332800.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0100336400.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0100325000.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0100318600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0100849400.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0100321400.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0100322800.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0100265600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0100331000.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0100318000.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0100329600.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0100509200.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0100598200.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0101447200.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0100324000.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0100312800.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0100317400.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0100323800.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0100318200.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0100406200.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0100322400.01 | RBH | None | None | None |
