Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_10G0364400 | OGI:10062680 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr10:23171344-23172634 | ||||||||
| Gene Symbol | GSTU49, OsGSTU49 | ||||||||||
| DNA seq | AAAAAAATCATGACCGATCGAATGAATGCGTACCACCACACGAAATTAAAAGCTCAGTATAAAATCAAAATGAATTGGCAAAGCGCTTGGCAAAATCCAATCAAATTCTGTCCTCTCCTGCGAACCAAAGAGAGCTTGGCAACATGGTGGTTGGGGCAGGAGGAGGAGACGAGCTCAAGTTGCTGGGCGTGTGGGATAGCCCGTACGTGAACAGGGTGCAGATCGTGCTCAACCTCAAGGGCCTGAGCTACGAGTACGTCGAGGAGGATCTCATGAACAAGAGCGACCTCCTCCTCGGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGCTCATCCACAACGGCAAGCCCATCGCCGAGTCGCGGGTCATCGTGGAGTACCTCGACGAGGCCTTCGCCGCCGGCGCCGGCGGCAGCACGGGCGCCTCCGTCCTCCCCTCCGACCCCTACGAGCGCGCCGTCGCCCGCTTCTGGGCCGCCTACGTCGACGACAAGGTGGGGTCACCGTGGTACACGATCCTGTTCGCCCGGGAGAGGGGGGAGAAGGTGGAGGCGGCGGCGCGGGCCATCTCGGCGCTGGAGACGGTAGAGGCAGGCGCGTTCAGGGATCACTCCTCCGAGGGGAAGACGACAAACGCAGCGGCGGCGCCGTTCTTCGGCGGCGACAGCATCGGGTTCGTCGACGTGGTGCTCGGCAGCTACCTGGGGTGGTTCAGGGTGATCGAGAAGATGATCGGCGTCAGGATCATGGACGCGGCGAGGACGCCGCGGCTGGCAGCGTGGGCGGAGCGGTTCGAGGCGGCGGACGCCGTGAGGGGCGTCCTCCCCGACGACGTCGACAAGGTGATCGACTTCTTGCAGGCGTGTTCGTGTACTCGTGTTGGTGTTCTGCTGTCAACGTCTTGGATTGCTCTGTTCCGTTTACTGTGTAGGGCTGGTAAAAATGTCCCATCGTGTTTCGTGTATCTTGGCCCTAACGGAATTTTATCGTTGTGAATAAGTAGGCCTGAATTGTGCAGGCTTCAATAACTGATGGGCGAATTTGTCATGATGAATTGGGTCAGACCAGCAAGGAATAAGTTCAACTAACGTCCCTCAATTATACGCTGAGTCTGAATGTGGTCTCCTAACCGTAATACCAAAAATGTGTATCCCTTAACTATGTAAAACCATTTAAAAAAGGTCTTGAGACAGTAGAGATACCTGGTTTCGCTGACGTGGCATCCTAATCAGCAAAAAAAAATGTGCGGCCCACATGTAAATGAGAAGAAAAAATTCGGGTCAGCAATCCT
More
|
||||||||||
| CDS seq | ATGGTGGTTGGGGCAGGAGGAGGAGACGAGCTCAAGTTGCTGGGCGTGTGGGATAGCCCGTACGTGAACAGGGTGCAGATCGTGCTCAACCTCAAGGGCCTGAGCTACGAGTACGTCGAGGAGGATCTCATGAACAAGAGCGACCTCCTCCTCGGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGCTCATCCACAACGGCAAGCCCATCGCCGAGTCGCGGGTCATCGTGGAGTACCTCGACGAGGCCTTCGCCGCCGGCGCCGGCGGCAGCACGGGCGCCTCCGTCCTCCCCTCCGACCCCTACGAGCGCGCCGTCGCCCGCTTCTGGGCCGCCTACGTCGACGACAAGGTGGGGTCACCGTGGTACACGATCCTGTTCGCCCGGGAGAGGGGGGAGAAGGTGGAGGCGGCGGCGCGGGCCATCTCGGCGCTGGAGACGGTAGAGGCAGGCGCGTTCAGGGATCACTCCTCCGAGGGGAAGACGACAAACGCAGCGGCGGCGCCGTTCTTCGGCGGCGACAGCATCGGGTTCGTCGACGTGGTGCTCGGCAGCTACCTGGGGTGGTTCAGGGTGATCGAGAAGATGATCGGCGTCAGGATCATGGACGCGGCGAGGACGCCGCGGCTGGCAGCGTGGGCGGAGCGGTTCGAGGCGGCGGACGCCGTGAGGGGCGTCCTCCCCGACGACGTCGACAAGGTGATCGACTTCTTGCAGGCGTGTTCGTGTACTCGTGTTGGTGTTCTGCTGTCAACGTCTTGGATTGCTCTGTTCCGTTTACTGTGTAGGGCTGGTAAAAATGTCCCATCGTGTTTCGTGTATCTTGGCCCTAACGGAATTTTATCGTTGTGA
More
|
||||||||||
| Protein seq | MVVGAGGGDELKLLGVWDSPYVNRVQIVLNLKGLSYEYVEEDLMNKSDLLLGSNPVHKKVPVLIHNGKPIAESRVIVEYLDEAFAAGAGGSTGASVLPSDPYERAVARFWAAYVDDKVGSPWYTILFARERGEKVEAAARAISALETVEAGAFRDHSSEGKTTNAAAAPFFGGDSIGFVDVVLGSYLGWFRVIEKMIGVRIMDAARTPRLAAWAERFEAADAVRGVLPDDVDKVIDFLQACSCTRVGVLLSTSWIALFRLLCRAGKNVPSCFVYLGPNGILSL |
||||||||||
| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_10G0364400 | OsZS97_10T0364400.1 | Chr10 | 23171344 | 23172634 | + | makerRMon | ||
| CDS seq | ATGGTGGTTGGGGCAGGAGGAGGAGACGAGCTCAAGTTGCTGGGCGTGTGGGATAGCCCGTACGTGAACAGGGTGCAGATCGTGCTCAACCTCAAGGGCCTGAGCTACGAGTACGTCGAGGAGGATCTCATGAACAAGAGCGACCTCCTCCTCGGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGCTCATCCACAACGGCAAGCCCATCGCCGAGTCGCGGGTCATCGTGGAGTACCTCGACGAGGCCTTCGCCGCCGGCGCCGGCGGCAGCACGGGCGCCTCCGTCCTCCCCTCCGACCCCTACGAGCGCGCCGTCGCCCGCTTCTGGGCCGCCTACGTCGACGACAAGGTGGGGTCACCGTGGTACACGATCCTGTTCGCCCGGGAGAGGGGGGAGAAGGTGGAGGCGGCGGCGCGGGCCATCTCGGCGCTGGAGACGGTAGAGGCAGGCGCGTTCAGGGATCACTCCTCCGAGGGGAAGACGACAAACGCAGCGGCGGCGCCGTTCTTCGGCGGCGACAGCATCGGGTTCGTCGACGTGGTGCTCGGCAGCTACCTGGGGTGGTTCAGGGTGATCGAGAAGATGATCGGCGTCAGGATCATGGACGCGGCGAGGACGCCGCGGCTGGCAGCGTGGGCGGAGCGGTTCGAGGCGGCGGACGCCGTGAGGGGCGTCCTCCCCGACGACGTCGACAAGGTGATCGACTTCTTGCAGGCGTGTTCGTGTACTCGTGTTGGTGTTCTGCTGTCAACGTCTTGGATTGCTCTGTTCCGTTTACTGTGTAGGGCTGGTAAAAATGTCCCATCGTGTTTCGTGTATCTTGGCCCTAACGGAATTTTATCGTTGTGA
More
|
|||||||
| Protein seq | MVVGAGGGDELKLLGVWDSPYVNRVQIVLNLKGLSYEYVEEDLMNKSDLLLGSNPVHKKVPVLIHNGKPIAESRVIVEYLDEAFAAGAGGSTGASVLPSDPYERAVARFWAAYVDDKVGSPWYTILFARERGEKVEAAARAISALETVEAGAFRDHSSEGKTTNAAAAPFFGGDSIGFVDVVLGSYLGWFRVIEKMIGVRIMDAARTPRLAAWAERFEAADAVRGVLPDDVDKVIDFLQACSCTRVGVLLSTSWIALFRLLCRAGKNVPSCFVYLGPNGILSL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.6320285 | 0.0577755 | 0.0265485 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0530900 | SBH | 3.695326 | 5.594304 | 4.876844 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38730 | RBH | 1.665729 | 1.853255 | 0.321397 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0530900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017880 | SBH | 0.0 | 3.343572 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018370 | SBH | 0.150370 | 26.990034 | 10.246747 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017660 | SBH | 0.516216 | 8.552260 | 0.252772 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018180 | SBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017920 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0340100 | RBH | 1.511119 | 0.090088 | 0.2631145 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017820 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0362800 | SBH | 0.034572 | 0.098056 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017590 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017420 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018070 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017640 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018140 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017890 | SBH | 1.660139 | 16.673845 | 4.585860 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017940 | SBH | 0.0 | 0.0 | 0.0 |
