Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_10G0361300 | OGI:10062680 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr10:23025996-23027808 | ||||||||
| Gene Symbol | GSTU19, OsGSTU19, GSTU6, OsGSTU6.1, GSTU6.1 | ||||||||||
| DNA seq | ATGGCCGGAGGAGGAGATGAGCTGAAGCTGCTGGGGATGTGGGCGAGCCCGTTCGCGCTGCGAGCGAAGCTCGCGCTCAGCTTCAAGGGCCTGAGCTACGACTACGTCGAGGAGGATCTCAAGAACAAGAGCGAGCTGCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGCTCATCCACAACGGCAAGCCCATCTGCGAGTCGCAGGTCATCGTACAGTACATCGACGAGGTGTTCCCCGACGCCGGCGTCACCCTCCTCCCCGCCGACCCCCACGATCGCGCCGTCGCTCGCTTCTGGGCCTCCTACATCGACGAAAAGGTTGTTACGATGATCGTGCACTAGTAGAGTACTCCCCTGTTGATTATTACTCCCTCCGTATTTTAATGTATGACGCGGTTGGTTTTTTTATGAACGTTTGACCATTCGTCTTATTCAAAATATTTATGTAATTATCATTTATTTTATTGTGAGTTAATTTATTATCAAATGTTCTTTAAGCATGACATAAATATTTTCATATTTAAAAAAAAATAAACAAAATAAATGGTCAAACGTTGGTTAAAAAAGTCAACGGTGTCATGCATTAAAATACAGGAAATACTTGATTTTCTCTTGGCATTTGTCATTGATCGGTGTGTTTTCTGTGCATTGCAGCTGCTTGGTGCGTGGATTCCGGTGTTCAGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGGTGAAGCAGACGTTCGCGGTGGCGGAGACACTGGAGGGAGCACTGAGCGAGTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACCGTCGGCTACGTCGACGTCGTGCTCGGAGGCTTCGTCGCGTGGGTGCACGCGATCGAAGAGGTGTTCGGCCTGAACCAGTTCGACGCCGCCAAGACGCCGCTCCTGGCGGCGTGGTTGGAGCGCTTCGACGAGCTCGACGCCGGCAAGGAGGTCATGCCGGACATCGGCAGGCTGGTCGAGCTCGAGAAGATGAGGCAGGCACAGGCACAGGCGGCGGTATATTGAAGTTTGAGCACAACCAGGGTTTACCTTATCGTTTGGGCCGAGGTTATCGTCACCCCACGGTAGCACGATAACCGCGATAATCGTACGATAATCGTCTAAAATCGCACAAAAATCGTATCCAAAAATTTGAATTCAAAACTCGGCGGTTTCACGGTTTCGCCGCGATAATCGCACGGTTTGCCGCGATAACCGCGATATTCACACGGTTATCGCGGGCTGTGTAGCTGAAATCATGTAAATGAAAAATATATAGGGAAAACAAATTAAAAAATACGGTTGAATATGTGTAGTAAACTAGAAATTGAGAATAATTGTAAGAATATGAAGAATACTTAAGGCCCAATATTGTCTTCTTTTTCTAATTTATAAATTATTTTCGGTTTTGCCCTCAAATTTAAATTTAGCTTACTCTATTTCAAAAAATTTCTTCACCATTGGCAACTACAAATCAAGAACTACATCCATGTTTTTTTTCAATTTTTTTCGATTTTTTTCCGGAATTTTGAATTTGGTCAAAATTCATTCAAACCATATCGCCGGTTTTTCCTACCGTACCCCCGCGGTAAGCGCGATAACCGCGATAATCGCGCGATAATCGTGCGATAAGTGAAACCCTGAGCACAACTATATTTGATTATCTGTGCTTTGATATTTTCGCAGTTTTTGGCTGTACGCCTGTACCTCTTATTGTTTCTGCAACCGTGTTTCATCAGTTCATGTTGCCGCACCGTGTATGTTTCTCCATGCGTCGCTGAAGTTGCCAACTGGGTATTCTACA
More
|
||||||||||
| CDS seq | ATGGCCGGAGGAGGAGATGAGCTGAAGCTGCTGGGGATGTGGGCGAGCCCGTTCGCGCTGCGAGCGAAGCTCGCGCTCAGCTTCAAGGGCCTGAGCTACGACTACGTCGAGGAGGATCTCAAGAACAAGAGCGAGCTGCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGCTCATCCACAACGGCAAGCCCATCTGCGAGTCGCAGGTCATCGTACAGTACATCGACGAGGTGTTCCCCGACGCCGGCGTCACCCTCCTCCCCGCCGACCCCCACGATCGCGCCGTCGCTCGCTTCTGGGCCTCCTACATCGACGAAAAGCTGCTTGGTGCGTGGATTCCGGTGTTCAGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGGTGAAGCAGACGTTCGCGGTGGCGGAGACACTGGAGGGAGCACTGAGCGAGTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACCGTCGGCTACGTCGACGTCGTGCTCGGAGGCTTCGTCGCGTGGGTGCACGCGATCGAAGAGGTGTTCGGCCTGAACCAGTTCGACGCCGCCAAGACGCCGCTCCTGGCGGCGTGGTTGGAGCGCTTCGACGAGCTCGACGCCGGCAAGGAGGTCATGCCGGACATCGGCAGGCTGGTCGAGCTCGAGAAGATGAGGCAGGCACAGGCACAGGCGGCGGTATATTGA
More
|
||||||||||
| Protein seq | MAGGGDELKLLGMWASPFALRAKLALSFKGLSYDYVEEDLKNKSELLLSSNPVHKKVPVLIHNGKPICESQVIVQYIDEVFPDAGVTLLPADPHDRAVARFWASYIDEKLLGAWIPVFRGKTEEEKAEGVKQTFAVAETLEGALSECSKGKPFFGGDTVGYVDVVLGGFVAWVHAIEEVFGLNQFDAAKTPLLAAWLERFDELDAGKEVMPDIGRLVELEKMRQAQAQAAVY |
||||||||||
| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_10G0361300 | OsZS97_10T0361300.1 | Chr10 | 23025996 | 23027808 | + | makerRMon | ||
| CDS seq | ATGGCCGGAGGAGGAGATGAGCTGAAGCTGCTGGGGATGTGGGCGAGCCCGTTCGCGCTGCGAGCGAAGCTCGCGCTCAGCTTCAAGGGCCTGAGCTACGACTACGTCGAGGAGGATCTCAAGAACAAGAGCGAGCTGCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGCTCATCCACAACGGCAAGCCCATCTGCGAGTCGCAGGTCATCGTACAGTACATCGACGAGGTGTTCCCCGACGCCGGCGTCACCCTCCTCCCCGCCGACCCCCACGATCGCGCCGTCGCTCGCTTCTGGGCCTCCTACATCGACGAAAAGCTGCTTGGTGCGTGGATTCCGGTGTTCAGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGGTGAAGCAGACGTTCGCGGTGGCGGAGACACTGGAGGGAGCACTGAGCGAGTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACCGTCGGCTACGTCGACGTCGTGCTCGGAGGCTTCGTCGCGTGGGTGCACGCGATCGAAGAGGTGTTCGGCCTGAACCAGTTCGACGCCGCCAAGACGCCGCTCCTGGCGGCGTGGTTGGAGCGCTTCGACGAGCTCGACGCCGGCAAGGAGGTCATGCCGGACATCGGCAGGCTGGTCGAGCTCGAGAAGATGAGGCAGGCACAGGCACAGGCGGCGGTATATTGA
More
|
|||||||
| Protein seq | MAGGGDELKLLGMWASPFALRAKLALSFKGLSYDYVEEDLKNKSELLLSSNPVHKKVPVLIHNGKPICESQVIVQYIDEVFPDAGVTLLPADPHDRAVARFWASYIDEKLLGAWIPVFRGKTEEEKAEGVKQTFAVAETLEGALSECSKGKPFFGGDTVGYVDVVLGGFVAWVHAIEEVFGLNQFDAAKTPLLAAWLERFDELDAGKEVMPDIGRLVELEKMRQAQAQAAVY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0475265 | 3.459103 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0527400 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38160 | SBH | 0.856712 | 1.084209 | 0.303403 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0527400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017880 | SBH | 0.0 | 3.343572 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018230 | RBH | 0.000000 | 4.369670 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017660 | SBH | 0.516216 | 8.552260 | 0.252772 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018120 | SBH | 0.0 | 0.036456 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017850 | SBH | 0.0 | 2.142120 | 1.816985 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0336900 | SBH | 0 | 0.1900875 | 0.0197165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017750 | SBH | 0.0 | 0.987144 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0363900 | SBH | 0.0152215 | 2.799602 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017660 | RBH | 0.356700 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017370 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018020 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017590 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018080 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017890 | RBH | 1.660139 | 16.673845 | 4.585860 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017870 | RBH | 0.0 | 0.0 | 0.0 |
