Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_10G0191800 | OGI:10034910 | 2/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr10:12309333-12311513 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACTGGGGTTGGTCTGGATCCAGGTAGAGTTGCTCGAAGTGGGCGGCCAATTCTTGGTTGTCCGTAGTGTATTGGGCATGTTGTCGAGCAAGCTCCCAGTCTTTAACGCTTAGTAGCATTTCGACGTGGTCGCTGCGCAGAGTCGTCCTCCGGTCTTCGATGATTCGGCCGCATAGACTGAAGGCCGATTCGGAGGACACCGTCGACACGGGCACCGTCAACACATCCCGTGCTAGTTTTGAAAGCACAGGATATGTTATCTTGTGGTCATTCCACCACCCGAGGACGTTGAAATCTTGTGCTTCGTGGTGGATGGCGTCGCTGTCCAAATAACCGGACAACTCTTCGGCCACAACATGCGAAGAGGCGTCTCCACTTGTAGCCGACGAACTGCCACCACCTTGGATTGAACTTGAAGACGATCCACCCCAAATCCTACCCCACTGTATCTTCTTCTTACCTGTAGTGGGGATAGGAGGGGGTCTCCGCTGGCGAACTTCCTGAAACTTTACTTCATATCTTCCAAAAACCTCATATAATTTACATCTAACCTCAGTATAAAAAGAACTATAATCTACACCTATAGTATCTCCAACAAGTGATAAAATAGCAGACAATCCCCTTAATTTACACCTAGGATCTAAAACAAAAGCAAGAGCATACAACATAGGTATATTTTTCCAATATTTCAAATATTTTTGTTTCATGTGAAAGACAGGTTCAGTTAGAACGTCATCATTTTCGTATTCTTTAAATAAAGTAGAAATTTCAAGAAGGTTGTGCAAAATTATATTAGCAGTTGGATAATAAACTTGTGACAAAGTTAGAGTACAATCATAAAAAGTTTCTAGAAATTGGTAAAATTTTTGGACAATTGCCCAAACATGCTCGTTCAGTACTGAAGACCCATCACTGTTTCTTGGGCCACCACGTGACTGAACAAAATCAGAAAGTAAACTACTATAAGGTAAAACAACTTTTAACATTAAATACGTTGCATTCCACCGATGCTCTGCATCGGTGGCAAACTTACGAGCTTTCACACCGGCCGCATTGCAAAACCTCTTCCATGCAGCAATCCGCGGGTTAGAAGCAGTTAACCACGCGATTGCTTGACGAACAGCATCGATGTGGTCACCTACCCTGTTCATGCCAGTCTTAACAATCAAATTAATTATATGACATGCACAACGCTGATGGAGTAGAAAAGATTGAGCATACACACAAAATAAAGGTTGCAATATTTCAATCGCCCTAGAATTAGCAGATGCATTATCTAGGGTGACAGCAAATATTTTATCAGCAAGATTAAATTCATTAATTACTTCCCTAATTCTTTCAGCTATGTTTTCTCCTGTATGTGAGACATCTATTAACCTAAGCCCTAAAACTCTCTTTTGTAATTGCCAATCATCATCAACAAAATGAACAACTACGCTAAGATAATCCTCTCTAGCTCTACTACTCCATATATCTGAAGTAACACTAACAGAGAAAGTACATGTACTAAACAGTTCCTTAAGTGCAGTTGCTTCCTTGTGATAAACATTCTCTAAATCTCTAGTTGATGTTTGCCTACTCACAGCTTTAAACCTAGGGTTATGAGATTGCTGAATGTAATGTTCAAAAGCAGGGGACTCCCCAAAGTTCAGGGGTAAATCTTGCCTGGCGATTAACCGGACAAGAGATTCCCGAGCAACCATGGGATCGTACTCCCAACTGCGTACCGTACCGTCTGGGTTTACCATAAGTTGCTGCTGCCGGAGTTGTATTCCTTGCTTCTTGGCACACGACTCCGCATGGCGCTTGAGGTGACCTGTACCACCAGAAGAACGAGCAGATAAAATTTGCCTACATATTCTACAACGGGCTTTCGATACCTCCCTTCCGTCGGGGCATGTTTCCTTTATCTCGTCGAAGCTTTGCCACACACCGGAGGTTCTCGATCTCTTCGAGCCGGTGTGTGTCGAAACACTTCCGCTCGCGGTTTCGGAAAATCCTTCCGAAGCTGTCTCCGCCTGAACCGGTACCTCCTCAACGACAGCCGTATGAACCGGTACCTCCTCCACAGATGGTGGAGTTGGAGCCGATCCGGAGGTACCGTCAAACCCCAACATGTAGTTGGGGTCGAAATCACCCAAGGTGAACGACGGCGACTGGTATGGAAAGTTCGGATCCAT
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| CDS seq | ATGGATCCGAACTTTCCATACCAGTCGCCGTCGTTCACCTTGGGTGATTTCGACCCCAACTACATGTTGGGGTTTGACGGTACCTCCGGATCGGCTCCAACTCCACCATCTGTGGAGGAGGTACCGGTTCATACGGCTGTCGTTGAGGAGGTACCGGTTCAGGCGGAGACAGCTTCGGAAGGATTTTCCGAAACCGCGAGCGGAAGTGTTTCGACACACACCGGCTCGAAGAGATCGAGAACCTCCGGTGTGTGGCAAAGCTTCGACGAGATAAAGGAAACATGCCCCGACGGAAGGGAGGTATCGAAAGCCCGTTGTAGAATATGTAGGCAAATTTTATCTGCTCGTTCTTCTGGTGGTACAGGTCACCTCAAGCGCCATGCGGAGTCGTGTGCCAAGAAGCAAGGAATACAACTCCGGCAGCAGCAACTTATGGTAAACCCAGACGGTACGGTACGCAGTTGGGAGTACGATCCCATGGTTGCTCGGGAATCTCTTGTCCGGTTAATCGCCAGGCAAGATTTACCCCTGAACTTTGGGGAGTCCCCTGCTTTTGAACATTACATTCAGCAATCTCATAACCCTAGGTTTAAAGCTGTGAGTAGGCAAACATCAACTAGAGATTTAGAGAATGTTTATCACAAGGAAGCAACTGCACTTAAGGAACTGTTTAGTACATGTACTTTCTCTGTTAGTGTTACTTCAGATATATGGAGTAGTAGAGCTAGAGAGGATTATCTTAGCGTAGTTGTTCATTTTGTTGATGATGATTGGCAATTACAAAAGAGAGTTTTAGGGCTTAGGTTAATAGATGTCTCACATACAGGAGAAAACATAGCTGAAAGAATTAGGGAAGTAATTAATGAATTTAATCTTGCTGATAAAATATTTGCTGTCACCCTAGATAATGCATCTGCTAATTCTAGGGCGATTGAAATATTGCAACCTTTATTTTGTGTGTATGCTCAATCTTTTCTACTCCATCAGCGTTGTGCATGTCATATAATTAATTTGATTGTTAAGACTGGCATGAACAGGGTAGGTGACCACATCGATGCTGTTCGTCAAGCAATCGCGTGGTTAACTGCTTCTAACCCGCGGATTGCTGCATGGAAGAGGTTTTGCAATGCGGCCGGTGTGAAAGCTCATCCTAGGTGTAAATTAAGGGGATTGTCTGCTATTTTATCACTTGTTGGAGATACTATAGGTGTAGATTATAGTTCTTTTTATACTGAGGTTAGATGTAAATTATATGAGGTTTTTGGAAGATATGAAGTAAAGTTTCAGGAAGTTCGCCAGCGGAGACCCCCTCCTATCCCCACTACAGGTAAGAAGAAGATACAGTGGGGTAGGATTTGGGGTGGATCGTCTTCAAGTTCAATCCAAGGTGGTGGCAGTTCGTCGGCTACAAGTGGAGACGCCTCTTCGCATGTTGTGGCCGAAGAGTTGTCCGGTTATTTGGACAGCGACGCCATCCACCACGAAGCACAAGATTTCAACGTCCTCGGGTGGTGGAATGACCACAAGATAACATATCCTGTGCTTTCAAAACTAGCACGGGATGTGTTGACGGTGCCCGTGTCGACGGTGTCCTCCGAATCGGCCTTCAGTCTATGCGGCCGAATCATCGAAGACCGGAGGACGACTCTGCGCAGCGACCACGTCGAAATGCTACTAAGCGTTAAAGACTGGGAGCTTGCTCGACAACATGCCCAATACACTACGGACAACCAAGAATTGGCCGCCCACTTCGAGCAACTCTACCTGGATCCAGACCAACCCCAGTAG
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| Protein seq | MDPNFPYQSPSFTLGDFDPNYMLGFDGTSGSAPTPPSVEEVPVHTAVVEEVPVQAETASEGFSETASGSVSTHTGSKRSRTSGVWQSFDEIKETCPDGREVSKARCRICRQILSARSSGGTGHLKRHAESCAKKQGIQLRQQQLMVNPDGTVRSWEYDPMVARESLVRLIARQDLPLNFGESPAFEHYIQQSHNPRFKAVSRQTSTRDLENVYHKEATALKELFSTCTFSVSVTSDIWSSRAREDYLSVVVHFVDDDWQLQKRVLGLRLIDVSHTGENIAERIREVINEFNLADKIFAVTLDNASANSRAIEILQPLFCVYAQSFLLHQRCACHIINLIVKTGMNRVGDHIDAVRQAIAWLTASNPRIAAWKRFCNAAGVKAHPRCKLRGLSAILSLVGDTIGVDYSSFYTEVRCKLYEVFGRYEVKFQEVRQRRPPPIPTTGKKKIQWGRIWGGSSSSSIQGGGSSSATSGDASSHVVAEELSGYLDSDAIHHEAQDFNVLGWWNDHKITYPVLSKLARDVLTVPVSTVSSESAFSLCGRIIEDRRTTLRSDHVEMLLSVKDWELARQHAQYTTDNQELAAHFEQLYLDPDQPQ |
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| Function | Putative AC transposase [UniProtKB/Swiss-Prot:P08770] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_10G0191800 | OsZS97_10T0191800.1 | Chr10 | 12309333 | 12311513 | - | makerRMon | ||
| CDS seq | ATGGATCCGAACTTTCCATACCAGTCGCCGTCGTTCACCTTGGGTGATTTCGACCCCAACTACATGTTGGGGTTTGACGGTACCTCCGGATCGGCTCCAACTCCACCATCTGTGGAGGAGGTACCGGTTCATACGGCTGTCGTTGAGGAGGTACCGGTTCAGGCGGAGACAGCTTCGGAAGGATTTTCCGAAACCGCGAGCGGAAGTGTTTCGACACACACCGGCTCGAAGAGATCGAGAACCTCCGGTGTGTGGCAAAGCTTCGACGAGATAAAGGAAACATGCCCCGACGGAAGGGAGGTATCGAAAGCCCGTTGTAGAATATGTAGGCAAATTTTATCTGCTCGTTCTTCTGGTGGTACAGGTCACCTCAAGCGCCATGCGGAGTCGTGTGCCAAGAAGCAAGGAATACAACTCCGGCAGCAGCAACTTATGGTAAACCCAGACGGTACGGTACGCAGTTGGGAGTACGATCCCATGGTTGCTCGGGAATCTCTTGTCCGGTTAATCGCCAGGCAAGATTTACCCCTGAACTTTGGGGAGTCCCCTGCTTTTGAACATTACATTCAGCAATCTCATAACCCTAGGTTTAAAGCTGTGAGTAGGCAAACATCAACTAGAGATTTAGAGAATGTTTATCACAAGGAAGCAACTGCACTTAAGGAACTGTTTAGTACATGTACTTTCTCTGTTAGTGTTACTTCAGATATATGGAGTAGTAGAGCTAGAGAGGATTATCTTAGCGTAGTTGTTCATTTTGTTGATGATGATTGGCAATTACAAAAGAGAGTTTTAGGGCTTAGGTTAATAGATGTCTCACATACAGGAGAAAACATAGCTGAAAGAATTAGGGAAGTAATTAATGAATTTAATCTTGCTGATAAAATATTTGCTGTCACCCTAGATAATGCATCTGCTAATTCTAGGGCGATTGAAATATTGCAACCTTTATTTTGTGTGTATGCTCAATCTTTTCTACTCCATCAGCGTTGTGCATGTCATATAATTAATTTGATTGTTAAGACTGGCATGAACAGGGTAGGTGACCACATCGATGCTGTTCGTCAAGCAATCGCGTGGTTAACTGCTTCTAACCCGCGGATTGCTGCATGGAAGAGGTTTTGCAATGCGGCCGGTGTGAAAGCTCATCCTAGGTGTAAATTAAGGGGATTGTCTGCTATTTTATCACTTGTTGGAGATACTATAGGTGTAGATTATAGTTCTTTTTATACTGAGGTTAGATGTAAATTATATGAGGTTTTTGGAAGATATGAAGTAAAGTTTCAGGAAGTTCGCCAGCGGAGACCCCCTCCTATCCCCACTACAGGTAAGAAGAAGATACAGTGGGGTAGGATTTGGGGTGGATCGTCTTCAAGTTCAATCCAAGGTGGTGGCAGTTCGTCGGCTACAAGTGGAGACGCCTCTTCGCATGTTGTGGCCGAAGAGTTGTCCGGTTATTTGGACAGCGACGCCATCCACCACGAAGCACAAGATTTCAACGTCCTCGGGTGGTGGAATGACCACAAGATAACATATCCTGTGCTTTCAAAACTAGCACGGGATGTGTTGACGGTGCCCGTGTCGACGGTGTCCTCCGAATCGGCCTTCAGTCTATGCGGCCGAATCATCGAAGACCGGAGGACGACTCTGCGCAGCGACCACGTCGAAATGCTACTAAGCGTTAAAGACTGGGAGCTTGCTCGACAACATGCCCAATACACTACGGACAACCAAGAATTGGCCGCCCACTTCGAGCAACTCTACCTGGATCCAGACCAACCCCAGTAG
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| Protein seq | MDPNFPYQSPSFTLGDFDPNYMLGFDGTSGSAPTPPSVEEVPVHTAVVEEVPVQAETASEGFSETASGSVSTHTGSKRSRTSGVWQSFDEIKETCPDGREVSKARCRICRQILSARSSGGTGHLKRHAESCAKKQGIQLRQQQLMVNPDGTVRSWEYDPMVARESLVRLIARQDLPLNFGESPAFEHYIQQSHNPRFKAVSRQTSTRDLENVYHKEATALKELFSTCTFSVSVTSDIWSSRAREDYLSVVVHFVDDDWQLQKRVLGLRLIDVSHTGENIAERIREVINEFNLADKIFAVTLDNASANSRAIEILQPLFCVYAQSFLLHQRCACHIINLIVKTGMNRVGDHIDAVRQAIAWLTASNPRIAAWKRFCNAAGVKAHPRCKLRGLSAILSLVGDTIGVDYSSFYTEVRCKLYEVFGRYEVKFQEVRQRRPPPIPTTGKKKIQWGRIWGGSSSSSIQGGGSSSATSGDASSHVVAEELSGYLDSDAIHHEAQDFNVLGWWNDHKITYPVLSKLARDVLTVPVSTVSSESAFSLCGRIIEDRRTTLRSDHVEMLLSVKDWELARQHAQYTTDNQELAAHFEQLYLDPDQPQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.011376 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g20070 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0008920 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0000411 | SBH | 0.0 | 0.0 | 0.075276 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0009230 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0316400 | SBH | 0.059774 | 0.0984695 | 0.061177 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0008960 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0335700 | SBH | 0 | 0.012514 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0008780 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0009160 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0009280 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G009050 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0009040 | SBH | 0.0 | 0.0 | 0.0 |
