Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_09G0315300 OGI:09056850 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr09:19252497-19256283
Gene Symbol Os_F0789
DNA seq

CGGCGTGGTCGTCGACCTCACGCCGGGCGCCGCGGCCTTCGCCACGGCGCTGCGGCAGAGGGTGACCTTCTCCAGGAAGAGGCTGGTGCCGCTGTTCGTGTCGCCGACGAAGGAGGACATGGAGCTCGTCGCCGGCATGGTGGCGGAAGGGAAGCTCAGGGCGGTGATCGAGTCGAGGCACCCGCTGAGCAGGGCGGAGGAGGGCTGGGCCAGGAGCATGGCGGGGCACGCCACCGGCAAGATCATCGTCGAGATGGGAGACGAACAGTGAGTGTGAGCTCGACGGATTTGTGGCCTGGAAGAACAGAATAAGATACGATTTTGTAGCGTGCAACTGTGCATGTATAGATGTACTGCTTGAGTCTTTTATTGACTCTCATCGTTTGTTTGTTTGTTAGCTTATAAGCCACAATCATCAAAATTTAAGTTTTCAAACTAAATTTGGTATTATTTGTTTTCTTTAACCTTTGGCTTTTAAACAGCTAAGAATAAAATATAAAGACCCCACCCTAATTATTGTTCACCATTGTCTTGTTTATTTTTCTATGGCTTATCAACCGATGCAACCAATGTCATTCAAATACTCGTACTTGGTCTATGGTGATCACTACTGACTAGCACTTAGGGCGTGTTTAGATCTATTGGTGTAAAGTTTTGGCGTGTTATATCGGATATACGGACACACATTTGAAATATTAAACGTAGACTAATAATAAAACAAATTACAGATTCCGCCTGTAACTGTAAGACGAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCATGGGGCAATTAGGCTTAAAAGATGTCTCGCAATTTATACGCGATCTGTGTAATTAGTTATTTTTTCGTTTATATTTAATATTCCATATATGTATCCAAATATTCGATGTGAAAGGGTGAAAAGTTCTGTCAGGTGATCTAAACAGGGCCTTAGATAAACTTGGTTTGTGCTACTGACTACAGAGAGTCAAACATTTAATAACTACTGTGATAACTTAGAAAACAAATGGTTATGGTTCATCAAAAAGTTACACAATGGCTAGTAATTAGGATTAGATAATACCTAACCACCACCAGCATGGCACCGGCTGCATGGTTCCAACACATTTAACTTCACATTGGTGGGAATTTTCCCCTCGATGTATCCTCTGATAGCCAAGACTGCTCTAGGGGATTCTGTGAGAACACCCTGGCTCACAGGAAAGCATTCATCAGAACTGTCTTCAGAACACCTAGCATTGCCATGAGTGGTGTCCAATTCAAGGCGCTCAAGTGACGTTGTGTTCTCAACAATATGGCATGTTAGCTCGACCAAGCTCTTCGCGGAGCAGAAGCCGCTGATCGTCACGGACTTGAGGTGTTCATGGTGATATTCTGGCATCTGTCTTAGATGTGAGGAACTCTCAAAGATTGATTCATGCTCCATGCTTTCCTGATATATCTGAAGATGAAAAAAGACATATACTTGAATCAGTACTTCTACCGTGGTAACATATATTTTTGTGGATGAAGGGAACGTTGCACAGAGCCTTACATCCAAGACGAATACCTCCAACAAAGGAGAAGCATCAAAAAATGAAACCAGAGAAAAATAGTCATAGGCTCGAGAAAAGGTCCATGCAAAAAGAGAAATAGTCAGATGCTTGAGGTACAGAAGTTTGGTTGGTAGCATTGGTGTGTCGACCATCTGCATAAAGATATCTCAGAATAGTCACTCAAAGGTATAACCAATGTATATACTGTACATTTTGCATAGTCTATAATAATGAAAGTTTAGTTTATACCTCGCAGTGTGAAGCTACGGCAAGAGTTTCAACATTTGGCACAATGGATGGAAGATCTGAACGAGCATAACATATGATGTTTGAACTGCACATGTATAGATTCTTCACTTGCGATGATTCCACAAGTGAGAGTTTTACCTTGTTTCCACTAAAGGAAAAACTGGAGAGGTTAGGGGCTTTGCTCTCTATCACCTGAACCCTCTTGCATTCCAAAACGTTCAGGCAGTTAAGCCGCTGCAGCACACAAGGCATCTTAAGGCTGACTATCTTTTTGCAGTACTTGAGTTCCAACTGCTCCAAAACAAACGAGTTGGAAAGGAGGCATGCTAACTCATCCCCTGAAATACGAACACAAGACAGATGCAGCCTTTTGAGGTTTCTTAATGGGCCAAGTTCAATTGTGGGATGAAAGGCACAATTGCCAAGCTCAAGACACCGAATTGAGTATGCAATCTTGTCAGAGAAAAGTGAGCATGGGAAGTTGAACTGTGGCTTGTTTCCAGACAGCATAACTGTGATTTCTTCAATCCCTGGTGTAATGGCAAACTGAAGCCAACTATCGACATAATCACAGTTATCTAACTTGCAGTGGATTGAAAGCTTGAATCTCTTCACACCAATGCCCGAGTGGTTTTTAAGGATGTGGTCAACTTTGCTGGTGAAATCTGTTTCACAAGCATTATCATTCAATCCTAGTGCATCTTCGTTAAAGGTGAGGTTGGGATGACATCTCCAGGATCGTAGGAAGGCACGAAACAAACATGCAGCACGGGCAGCATCTCGCATTGGCATCAGGGAAAGTATATAACTCCAGATGTCCTGCAGACACCATCATGGGATAACATTTCAACATTGCAATTATAAACCTAAATGGCTACTTTGATTAGAGAGAAACATGAATAGAACCATATGGCGTATCATTTTTTTTCAACCCCAGGAGTACTGCACATGATTTCTCAAGGTGCGTTGCATTAGATAGGCATGTTGTGCATTAGAATGGCGCATAAATTAAGCATTGCGTAGAGCTGTTTTCCTTTAACAGTGTTGGTAGTTTAATATAGTTTAGGTAGGTCTCTGGTCCTCTTTAGAGTCTTAAAAGGACACTAGCAAGGGCACATACTTAAGAATGGAATGCATAGTAGTATTTTGAAATGTTCCAATTAATTCATAGATTTTTTTTTTTAAAAAAAACAGTGTATGCAGTGCAGTACCTCTGGAAGAGTTACCCCTGAATTTGTCATCATTTTACCACCCTGGGAATCATCTTGTTGGCAGGGTGAGTACTTCCTTCTCACCGATTTAGTAATTGATCCTCCTTCTGCATATCATGCATTGTAATAGATAATTTCAGACATTAACAGAAGAGAACAACAGATTCAACCTCACAAACGAGTCATATAGAAATCCAAAATGTTTCCTTATCCAACTTTTGCGCGAGAATGCTGATGAATTCACCAAACCAAATTCTTCCAATTTTAGAGAAACAATTCACCAAACCAATCCAATTTTCCATTCTGGAAAAATACTGGCCGCAATCTCCCAAAAAAAGTCCGAGCAGCACATCACACACAACGCACCGGAGAGATGAAGTGCAGAGAGGCCGAGGGGAAAGCGCTTACTGCGGGCTTTGTTTCGCCGGCGACGGCGCTCCCGCCGGATGGAGATGAGCCGGTTCAGCGCGAGCAGGGCCATGGCGGCATACGCGGGATCGAGCCGAGGAAATCGAGAGCACCCCGAGGCGGCCCACCTCTCTCCTCCCTGCCCCTCTCCTACCTACGAAGATCGAGGCGCGAGGTCGGGGAGGGGGTAGAGATCCAGGGCATCCACCCGCGCGCGATCTCGGCTTCGGTCTGCGCCGCCGCCGGAGGAGGAAGAATGCGGCGCGGCGGAGGCCGGCGCCGTCGCGGCTGGAGAGGCGAGACGAGAAGGAAGATACCGAACTCGGTACAGACCGCAGAGGTTGCAAAT

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CDS seq

ATGGCCCTGCTCGCGCTGAACCGGCTCATCTCCATCCGGCGGGAGCGCCGTCGCCGGCGAAACAAAGCCCGCAAAGGAGGATCAATTACTAAATCGGTGAGAAGGAAGTACTCACCCTGCCAACAAGATGATTCCCAGGGTGGTAAAATGATGACAAATTCAGGGGTAACTCTTCCAGAGGACATCTGGAGTTATATACTTTCCCTGATGCCAATGCGAGATGCTGCCCGTGCTGCATGTTTGTTTCGTGCCTTCCTACGATCCTGGAGATGTCATCCCAACCTCACCTTTAACGAAGATGCACTAGGATTGAATGATAATGCTTGTGAAACAGATTTCACCAGCAAAGTTGACCACATCCTTAAAAACCACTCGGGCATTGGTGTGAAGAGATTCAAGCTTTCAATCCACTGCAAGTTAGATAACTGTGATTATGTCGATAGTTGGCTTCAGTTTGCCATTACACCAGGGATTGAAGAAATCACAGTTATGCTGTCTGGAAACAAGCCACAGTTCAACTTCCCATGCTCACTTTTCTCTGACAAGATTGCATACTCAATTCGGTGTCTTGAGCTTGGCAATTGTGCCTTTCATCCCACAATTGAACTTGGCCCATTAAGAAACCTCAAAAGGCTGCATCTGTCTTGTGTTCGTATTTCAGGGGATGAGTTAGCATGCCTCCTTTCCAACTCGTTTGTTTTGGAGCAGTTGGAACTCAAGTACTGCAAAAAGATAGTCAGCCTTAAGATGCCTTGTGTGCTGCAGCGGCTTAACTGCCTGAACGTTTTGGAATGCAAGAGGGTTCAGGTGATAGAGAGCAAAGCCCCTAACCTCTCCAGTTTTTCCTTTAGTGGAAACAAGGTAAAACTCTCACTTGTGGAATCATCGCAAGTGAAGAATCTATACATGTGCAGTTCAAACATCATATGTTATGCTCGTTCAGATCTTCCATCCATTGTGCCAAATGTTGAAACTCTTGCCGTAGCTTCACACTGCGAGATGGTCGACACACCAATGCTACCAACCAAACTTCTGTACCTCAAGCATCTGACTATTTCTCTTTTTGCATGGACCTTTTCTCGAGCCTATGACTATTTTTCTCTGGTTTCATTTTTTGATGCTTCTCCTTTGTTGGAGGTATTCGTCTTGGATATATATCAGGAAAGCATGGAGCATGAATCAATCTTTGAGAGTTCCTCACATCTAAGACAGATGCCAGAATATCACCATGAACACCTCAAGTCCGTGACGATCAGCGGCTTCTGCTCCGCGAAGAGCTTGGTCGAGCTAACATGCCATATTGTTGAGAACACAACGTCACTTGAGCGCCTTGAATTGGACACCACTCATGGCAATGCTAGGTGTTCTGAAGACAGTTCTGATGAATGCTTTCCTGTGAGCCAGGGTGTTCTCACAGAATCCCCTAGAGCAGTCTTGGCTATCAGAGGATACATCGAGGGGAAAATTCCCACCAATGTGAAGTTAAATGTGTTGGAACCATGCAGCCGGTGCCATGCTGGTGGTGGTTAG

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Protein seq

MALLALNRLISIRRERRRRRNKARKGGSITKSVRRKYSPCQQDDSQGGKMMTNSGVTLPEDIWSYILSLMPMRDAARAACLFRAFLRSWRCHPNLTFNEDALGLNDNACETDFTSKVDHILKNHSGIGVKRFKLSIHCKLDNCDYVDSWLQFAITPGIEEITVMLSGNKPQFNFPCSLFSDKIAYSIRCLELGNCAFHPTIELGPLRNLKRLHLSCVRISGDELACLLSNSFVLEQLELKYCKKIVSLKMPCVLQRLNCLNVLECKRVQVIESKAPNLSSFSFSGNKVKLSLVESSQVKNLYMCSSNIICYARSDLPSIVPNVETLAVASHCEMVDTPMLPTKLLYLKHLTISLFAWTFSRAYDYFSLVSFFDASPLLEVFVLDIYQESMEHESIFESSSHLRQMPEYHHEHLKSVTISGFCSAKSLVELTCHIVENTTSLERLELDTTHGNARCSEDSSDECFPVSQGVLTESPRAVLAIRGYIEGKIPTNVKLNVLEPCSRCHAGGG

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_09G0315300 OsZS97_09T0315300.1 Chr09 19252497 19256283 - makerRMon
CDS seq

ATGGCCCTGCTCGCGCTGAACCGGCTCATCTCCATCCGGCGGGAGCGCCGTCGCCGGCGAAACAAAGCCCGCAAAGGAGGATCAATTACTAAATCGGTGAGAAGGAAGTACTCACCCTGCCAACAAGATGATTCCCAGGGTGGTAAAATGATGACAAATTCAGGGGTAACTCTTCCAGAGGACATCTGGAGTTATATACTTTCCCTGATGCCAATGCGAGATGCTGCCCGTGCTGCATGTTTGTTTCGTGCCTTCCTACGATCCTGGAGATGTCATCCCAACCTCACCTTTAACGAAGATGCACTAGGATTGAATGATAATGCTTGTGAAACAGATTTCACCAGCAAAGTTGACCACATCCTTAAAAACCACTCGGGCATTGGTGTGAAGAGATTCAAGCTTTCAATCCACTGCAAGTTAGATAACTGTGATTATGTCGATAGTTGGCTTCAGTTTGCCATTACACCAGGGATTGAAGAAATCACAGTTATGCTGTCTGGAAACAAGCCACAGTTCAACTTCCCATGCTCACTTTTCTCTGACAAGATTGCATACTCAATTCGGTGTCTTGAGCTTGGCAATTGTGCCTTTCATCCCACAATTGAACTTGGCCCATTAAGAAACCTCAAAAGGCTGCATCTGTCTTGTGTTCGTATTTCAGGGGATGAGTTAGCATGCCTCCTTTCCAACTCGTTTGTTTTGGAGCAGTTGGAACTCAAGTACTGCAAAAAGATAGTCAGCCTTAAGATGCCTTGTGTGCTGCAGCGGCTTAACTGCCTGAACGTTTTGGAATGCAAGAGGGTTCAGGTGATAGAGAGCAAAGCCCCTAACCTCTCCAGTTTTTCCTTTAGTGGAAACAAGGTAAAACTCTCACTTGTGGAATCATCGCAAGTGAAGAATCTATACATGTGCAGTTCAAACATCATATGTTATGCTCGTTCAGATCTTCCATCCATTGTGCCAAATGTTGAAACTCTTGCCGTAGCTTCACACTGCGAGATGGTCGACACACCAATGCTACCAACCAAACTTCTGTACCTCAAGCATCTGACTATTTCTCTTTTTGCATGGACCTTTTCTCGAGCCTATGACTATTTTTCTCTGGTTTCATTTTTTGATGCTTCTCCTTTGTTGGAGGTATTCGTCTTGGATATATATCAGGAAAGCATGGAGCATGAATCAATCTTTGAGAGTTCCTCACATCTAAGACAGATGCCAGAATATCACCATGAACACCTCAAGTCCGTGACGATCAGCGGCTTCTGCTCCGCGAAGAGCTTGGTCGAGCTAACATGCCATATTGTTGAGAACACAACGTCACTTGAGCGCCTTGAATTGGACACCACTCATGGCAATGCTAGGTGTTCTGAAGACAGTTCTGATGAATGCTTTCCTGTGAGCCAGGGTGTTCTCACAGAATCCCCTAGAGCAGTCTTGGCTATCAGAGGATACATCGAGGGGAAAATTCCCACCAATGTGAAGTTAAATGTGTTGGAACCATGCAGCCGGTGCCATGCTGGTGGTGGTTAG

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Protein seq

MALLALNRLISIRRERRRRRNKARKGGSITKSVRRKYSPCQQDDSQGGKMMTNSGVTLPEDIWSYILSLMPMRDAARAACLFRAFLRSWRCHPNLTFNEDALGLNDNACETDFTSKVDHILKNHSGIGVKRFKLSIHCKLDNCDYVDSWLQFAITPGIEEITVMLSGNKPQFNFPCSLFSDKIAYSIRCLELGNCAFHPTIELGPLRNLKRLHLSCVRISGDELACLLSNSFVLEQLELKYCKKIVSLKMPCVLQRLNCLNVLECKRVQVIESKAPNLSSFSFSGNKVKLSLVESSQVKNLYMCSSNIICYARSDLPSIVPNVETLAVASHCEMVDTPMLPTKLLYLKHLTISLFAWTFSRAYDYFSLVSFFDASPLLEVFVLDIYQESMEHESIFESSSHLRQMPEYHHEHLKSVTISGFCSAKSLVELTCHIVENTTSLERLELDTTHGNARCSEDSSDECFPVSQGVLTESPRAVLAIRGYIEGKIPTNVKLNVLEPCSRCHAGGG

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Gene Transcript Chromosome Start End Strand Source
OsZS97_09G0315300 OsZS97_09T0315300.2 Chr09 19253327 19256283 - makerRMon
CDS seq

ATGGCCCTGCTCGCGCTGAACCGGCTCATCTCCATCCGGCGGGAGCGCCGTCGCCGGCGAAACAAAGCCCGCAAAGGAGGATCAATTACTAAATCGGTGAGAAGGAAGTACTCACCCTGCCAACAAGATGATTCCCAGGGTGGTAAAATGATGACAAATTCAGGGGTAACTCTTCCAGAGGACATCTGGAGTTATATACTTTCCCTGATGCCAATGCGAGATGCTGCCCGTGCTGCATGTTTGTTTCGTGCCTTCCTACGATCCTGGAGATGTCATCCCAACCTCACCTTTAACGAAGATGCACTAGGATTGAATGATAATGCTTGTGAAACAGATTTCACCAGCAAAGTTGACCACATCCTTAAAAACCACTCGGGCATTGGTGTGAAGAGATTCAAGCTTTCAATCCACTGCAAGTTAGATAACTGTGATTATGTCGATAGTTGGCTTCAGTTTGCCATTACACCAGGGATTGAAGAAATCACAGTTATGCTGTCTGGAAACAAGCCACAGTTCAACTTCCCATGCTCACTTTTCTCTGACAAGATTGCATACTCAATTCGGTGTCTTGAGCTTGGCAATTGTGCCTTTCATCCCACAATTGAACTTGGCCCATTAAGAAACCTCAAAAGGCTGCATCTGTCTTGTGTTCGTATTTCAGGGGATGAGTTAGCATGCCTCCTTTCCAACTCGTTTGTTTTGGAGCAGTTGGAACTCAAGTACTGCAAAAAGATAGTCAGCCTTAAGATGCCTTGTGTGCTGCAGCGGCTTAACTGCCTGAACGTTTTGGAATGCAAGAGGGTTCAGGTGATAGAGAGCAAAGCCCCTAACCTCTCCAGTTTTTCCTTTAGTGGAAACAAGGTAAAACTCTCACTTGTGGAATCATCGCAAGTGAAGAATCTATACATGTGCAGTTCAAACATCATATGTTATGCTCGTTCAGATCTTCCATCCATTGTGCCAAATGTTGAAACTCTTGCCGTAGCTTCACACTGCGAGATGGTCGACACACCAATGCTACCAACCAAACTTCTGTACCTCAAGCATCTGACTATTTCTCTTTTTGCATGGACCTTTTCTCGAGCCTATGACTATTTTTCTCTGGTTTCATTTTTTGATGCTTCTCCTTTGTTGGAGGTATTCGTCTTGGATATATATCAGGAAAGCATGGAGCATGAATCAATCTTTGAGAGTTCCTCACATCTAAGACAGATGCCAGAATATCACCATGAACACCTCAAGTCCGTGACGATCAGCGGCTTCTGCTCCGCGAAGAGCTTGGTCGAGCTAACATGCCATATTGTTGAGAACACAACGTCACTTGAGCGCCTTGAATTGGACACCACTCATGGCAATGCTAGGTGTTCTGAAGACAGTTCTGATGAATGCTTTCCTGTGAGCCAGGGTGTTCTCACAGAATCCCCTAGAGCAGTCTTGGCTATCAGAGGATACATCGAGGGGAAAATTCCCACCAATGTGAAGTTAAATGTGTTGGAACCATGCAGCCGGTGCCATGCTGGTGGTGGTTAG

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Protein seq

MALLALNRLISIRRERRRRRNKARKGGSITKSVRRKYSPCQQDDSQGGKMMTNSGVTLPEDIWSYILSLMPMRDAARAACLFRAFLRSWRCHPNLTFNEDALGLNDNACETDFTSKVDHILKNHSGIGVKRFKLSIHCKLDNCDYVDSWLQFAITPGIEEITVMLSGNKPQFNFPCSLFSDKIAYSIRCLELGNCAFHPTIELGPLRNLKRLHLSCVRISGDELACLLSNSFVLEQLELKYCKKIVSLKMPCVLQRLNCLNVLECKRVQVIESKAPNLSSFSFSGNKVKLSLVESSQVKNLYMCSSNIICYARSDLPSIVPNVETLAVASHCEMVDTPMLPTKLLYLKHLTISLFAWTFSRAYDYFSLVSFFDASPLLEVFVLDIYQESMEHESIFESSSHLRQMPEYHHEHLKSVTISGFCSAKSLVELTCHIVENTTSLERLELDTTHGNARCSEDSSDECFPVSQGVLTESPRAVLAIRGYIEGKIPTNVKLNVLEPCSRCHAGGG

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.8555115 1.2923215 5.5645285

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0502600 SBH 0.123805 0.0 1.038044
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g32580 SBH 0.081092 0.0 0.377226
Nipponbare | IRGSP 1.0 | RAP-db Os09g0502600 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0015590 SBH 0.000000 2.802063 0.861239
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0015600 SBH 0.0 0.574164 0.511011
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0015820 SBH 0.0 0.0 1.063794
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_09g0015610 RBH 0.059847 0.106295 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0015750 SBH 5.578064 3.825436 14.007648
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0326200 SBH 5.3888455 3.126287 5.375338
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0015600 RBH 0.132849 0.072648 0.519741
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0315200 RBH 1.824517 0.802349 4.738747
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0015570 RBH 0.104130 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0015440 RBH 0.265119 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0015500 SBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0015360 RBH 0.143628 0.0 0.554072
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_09g0015480 RBH 0.147261 0.690092 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_09G015880 RBH 0.122106 0.875533 1.501507
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0015670 SBH 0.489735 2.735040 3.352199
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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