Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_05G0422500 | OGI:05071620 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr05:27210593-27216658 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCGCTCCTCCCCCGCGCGGCGCGGCTGGCGGCCCTCTCCGCGCCGCGCGCCTACTCTTCCGCCACGGCGGCGGCGGCGGGCGCGGGTGGCTCCGCGTCGCCCGCGCCATACGGCGGGGCGCCGCCGCCGGCCGCGAACTCCAAGGCGGCGGAGTTCGTGATCTCCAAGGTGGACGACCTGATGAACTGGGCGCGCCGGGGCTCGATCTGGCCCATGACGTTCGGGCTCGCCTGCTGCGCCGTGGAGATGATGCACACGGGCGCCTCCCGCTACGACTTCGACCGGTTCGGCGTCATCTTCCGCCCCTCCCCGCGCCAGTCCGACTGCATGATCGTCGCCGGCACGCTCACCAACAAGATGGCCCCCGCGCTCCGCAAGTCCGTACACTTGCGCCCTTTACCTTGCGTTCTTCTTTACATATAACCATCAAATTTGTGATTTATTTCGTATCGTCTCTGAGAGAAGAGTAGCAATTTTCTGTTAGGATGCTCTATTTTGCACTTTGAATTGGTTGGTGATGCTGCTTATATAGACTTCGGTAGAGGAGGGCGATTGGATTGGGGATTTTTTTTTTGTCATGTCAAGTTGCATACGATGTTTAATACTTCATTGTGCAGATTCTTTTTTGCCGGGTCGGCCGAACGAGGCCGACCAATTTCATTAAGAATGATTCTGTGCAGATCAATTTTTTTGCAGATTCTTTTTTTTTATCCTTATAGGCGTCAATCCCTTGCGTGTTCCTCATAGGAGTAGATAAATTTGCGCTTAGTCTGAGCTTCCCATGTGTTCACAGCTTCGGTTTTGTATGGCATATGCCGTTGAACTATTTTTCCTCTTAGATTATATAGAGAATTGTATACTGGTTTAGCATGCGTTTGTAAATCAGAGGCACGTGCATTTTTTAGTGTCAGGAATAGAACAGTGTCGTGCTTGTTCAAATATCATAAGGGTTCATTGAATAGAATAATGGTTTTCCATATCAAAACATGAGCCATGTGTCTTGTGAACATGGTTGATGTAAGTACAACTGCTAAATATGCATTCATATCCACTTCTGTTAGTTGAAAGTAGTTAAGTTTTGTACTTAAAGAGTGATTTCCCTTCATTGTTTCTTTTATTTGTAGCTATGTAGTACCAATATTAGAATTGGTACTGTTTCTAATGCATTATTAGGACTTAGGATATGGAGAGTGCAATTCGTTTAAATACATTTTGAATAAAATTCATAGGTACTTCGATGAGTTTAAACACCTCATGAATAAAATTCATAGGTACACAGTACAATAATATTTTGTGTGCTTTATGTGTTACATTCCAACTTTCTATGCTGAAATAAAAACATGTCCATTTGCTTACTCAGAGAATCCCATGAAAGCAACAAATCTAAATGTATGCATCTTGTAGAAGAAAGATTGCTGGTTCCTTAGTGGAGTATGGTCACATACTTTAATTAATTGTAGTACTTCGTCCAAAAAAAACCCTTCAATTGTAGTACCTTTGCAAAATGTATGTATATGGTTATCCTAGGGAGTATAGCTATTTTTCTTATAGGAATTTGGTTTAACCTCCGCAAGTGTGCCTATATGGTTACCCTACGGAGTAAACCTATTTTCTTATGAGAATTTGGTTCTGATTGCCGACATGTTTATTGCTTTTTGAAAGAACAGTGTTTTTTGTGTTGATGATCTCATGGTTCTCAAATCTCAATGTGCGTGTATTATGGGAATCATAAGGAATAAGGACCAACAGTAAAAAACATAATATTGGTTGGAGACCTTTAAAACATGCGTACATGTAATTTTTATGTGAACTACTAACTGACAGACACCTGTGTAAACTTGGTGACCTTCTCCTTAGTGGTTGTCTTTTATTCACTACCAGCTCAATACCGATAGTCGCACAGCTATAGTTTGCAATGTTGCTGACATTTGTAGCTGTCTGTTGTTCTCTGCAGGGTTTACGATCAGATGCCAGAACCTCGATGGGTTATTTCAATGGGCAGCTGTGCCAACGGTGGTGGATACTACCACTACTCCTACTCCGTTGTGCGCGGATGCGACAGGATTGTTCCCGTGGACATCTACGTCCCTGGATGCCCTCCAACTGCTGAAGCTCTACTGTATGGCGTCCTGCAGTTGCAGAAGAAGATCAACAGGCGCAGGGATTTCCTTCACTGGTGGAACAAGTAAACCAGCACTTCTCTGCTTTCCTATCTGCTACGAATACGATCCTGTCAAAATGTTATCGAGCTTCTGTGTTAAATAAAGGAAAGCGTGTGCTTTCCGATCATCAAACTCTCTGTAGTAGATGCAGTGATAGTGAGCTCCTGGCTACCTTGATCACCGTTCATGGACAAAAAAACAATTGGTGATGCTGTTGCGGTGTTGCTGCTTTAATACTATGTATAATATTTTGTAATTTGTGTTGTCTTCTACTAGTGATGTAACATTGGGTATGACGCTCAATGGCGTTGTGATGCTGTATACTTTACCAACTTGTGTAAATAGAAGTGATGATAATATAAAAAAAATTAATAGAAGTGATGATAAATTGTTAATGGCTGCTATATGTTCTGATTTCTTTACTCATCAGTCTATATAACTTGTATATTGGAGAGTTCAGAAGTTAAGTCATGCGTACTTTTTGTTTTTTTTCTTTTTATCCCAATTTCTTTCTTTTTAACTACAGTAAATATAAAGATAGAATGTACAATTGCTGACCTTGCACGATGACGTGATATGTCCACATGACGTTTTTATGGCGTTTCTTTTGGACCGAAGGACTATGTTAAACCAATTGATAAATCTTGAGTATTTGTTTGGATAATTTAAAGGGACAATTTCTTATTTGACCCTGTTTTGAAGCCTAACTACCAATTTGACCCTATTTTTTCTAGTTTGCTTATTTGACCCTACTTTTCGAAAATGAACACTCCGTCTGACCCTGTTTCTACAACACCGTTAAGAGTTCATTTAAAAAAAGAGAAAAAATAAAATCACATTTCATAATGACTAAAATACCCTCCAACTGTATCCTCATCTAACCCTTTTCTCTCCCGGTCTCTCTCTCTATCATATCCCTTCTCTCTCCGGCGAGGGAGCTGTGGCGGGGAAGGTAAGCGGCAGAGCCGGCTGGTGGAGGGAGGGACCACCGGCGGCGGCAGCGGGCCATGGAGGGAGGGGATCTGCGTCGGCGCCAACTCGCGGAGGGAGGGCGGCTGCGCCGGCGTGGATCGGCGGCGGCGCCGGCTGATGGAGGGGGGAGCACCGGCGGCGGTAGGGGGCCGTGGAGGGACGGGATCCACGCCGGCGTCAACTCGCGGCGGGAGGGCGGCTGCGCCGAGCACGGATCCACGGCGGTGCCGCTGGTGGAGGGAGGGAGCACCGGCGGCGGCGGCCGGCCGTGGAGGAAGGGGATCCGCGCCGCCGTCAACTTGTAGAGGGAGGGCGGCTGCGCCGAGCGCAGATCTACGGCGGCGCTGGTGGAGTTTCGACCCATAGGAAGTCCACCCCTGCCACTTCCAGCCCGCCGGCGAGGGGGAGCTCGTTGTCCAGGCCAGGCAGAGCGGGCCGATGGCATGGCCGACGCCGGCACAGGCGCTCGTATGGAGGGAGGAGGTGGCAGCGGCAGCGCCGGATCCGCCGACTGCAGCTCGAGATCCACCGCCCGGACTCGCCGCCGCCACTCCTCCTCCTCGTCGTCGTCACCAGGGCCGGCGCCGGCTCACCGTCTCGACTTTCGCCGCCTCTCCCTGTGGTGGATCCGTGGAGGAGAGGAGAAGAACTCGCAGCCGCCACTCCTCATCATCATCGTCGTCGTCACTAGGGCCGGCGCCGGCTCGTCGTCCGCCTCTCCCTGTGGTGGATCCTTGGAGGAGAGGAGAAGAGAGAAGAGAGGATTGGAGAAGATAGAACTGACGGCAGGGTCCCACATGTAATAGGGTCAAATGAGTAAGGGCAGAAGAGACATTTTGTGCTTCAGTTAACACCATTAGATGCCCTTAACGAAATAGGGTCATACCGTGTCTTCAATTTTGAAAAAGAGGGTCAAATAAGCAAACCCTAAAAAGTAGGGTCAAATTGGTAGTTAGAGTTCAAAACGGGGTCAAATAAACAATTGCCCCTAATTTAAAACATCAAAGACTAAATTGACCATGGGGCAAAATTCCAAAGCCTATATCACTATATGGGCTATTCACCCGCAGATAAAGTAAAAACTATCCGGGTAACAAACGAATAGTAGATAGTAGGAAACACCTGAATAAAAATACTCCTAAATCAAATCGTGATTTACCCAAACTAAACCGGCTTTGACCCCTTCCCCAAGCCTAAAAGCCCCAACCCTTTTATACCTCCCCACAAGAGAGGCAAAATCCGCTCGCTCTCAGACTCGCGACGCCGCCTTCTTCTTCGATCCCCTCTCCCTCCGATCTCCCCCTCCCCCGCAGGTAAATCAGAGAAACCCCCACTAGATTTCGAATCCAAATCGAGGCCTCTTCCTCACGATCTCACCGCATTTGCTGTTGCGATTCCCACCTCGGGGTTTTGTGGTTCGGTTTGGAGCAGATCTAATGGCGGCGCTGGCGTCGAAGCTGGCACAGATGCAGGCGAAGGTGTGCGACGCGGCGAGGTTCGCGGCGAAGCACGGGTGCGCGTACCACAGGGCGCTCATGGAGAAGAACCAGAAGTACGTCGCCGACCCGCCCACCATCGAGAGGTGCCAGGAGCTCTCCAAGCAGCTCTTCTACACCCGCCTCGCCAGGTCGGTCCACCCTCACGATCTCCCTCCACCTTCTCCACGATCTCTTAGTCCTCCACATCTGAATTATCTCTATTGTTTAGATTGCGCACTCCATTAGAACACGATCTCGATCACTTCCACATTATGGAAGGCCGAATATGGGATTCTAATCATCTATGGCGAAACCTAATTATGTTGCCTAATTAGATAGACCAGCAATTTTGGCTGATTGTTTTAATTGAATAAATTAGCAGCACATCATGTAAAGTGACAATGCAGGAAATTGGTACCATTGAAAGTCTGGAAATTGCAGTGTTGAAAAGTGTGTTATTTTTGGTGATGTTCTCCTGCTATATCGGAAGTTAGAATAATGATCAGCGATGTCTATTCCATCCATCCTAATAATGGAATCTATGCTTCCCGTCTCTTAGAAGCTGAGCAATGCATAATGCATAATGGTCATGTTGTGAACATAGTCCATAGCGATGCATTGCAACCGTGTTTTGAGGATGTTAAGTATTTTTGCTGAACAAGTTGTCACGTTGCATGCAATTAGCCATGGAAAACAAGTTCCTCCTAAATTCTATGTAAATGAAGACGCAAGAGATGGGTAGTGGGTTTATATGGTAATGTGGGTTGAAAGTCACTGATCTTGGCCTTAGCAAGATTGATCTGATGAGAAGCAAGCTTTATTTGAGTTTTTTTTAACTGTGAGAAATTACTTTGTTTTGAGCCAATGCTTTTCTCTTGGACAGAGTCCCAGGGATGTAATTGTTCCTGATCAGCCATTTTGTCTTCATTTGTCTTTTGAGAAGACCGATACTAGTTATTTGTTTGAGCTGCATTTTGCTTGTACTTCATAGAGATAGAGTAGTAGTTTGTCTATTTCACCATTATTATTCATCCGTGTTGTGCTAAAAGTGCGCCTTCAGTGCACATTCCTCTGGTTGTCTTTGCCAGTGCTATTATGAATTATAATATACATCTGATATGGTGCCATAATTTGATGATTCATTACATAGGTGACAGAAGATACTTGATCATTCATTTGATACCATAATTTCACTCACATTATAAGGTGCATTTCGTATCTTCAATCTCTGTGTCTTTACTGACTAGTGACACATTTCTTGCAGCCTTCCTGGTCGCTATGAGGCATTCTGGAAGGAAGCGGATCAAGTGAAGAACTTCTGGAGAAACAGAAAGGATCTGAACGTTGAGCATGCTGGCGTTGCTGCACTTTTTGGCATTGAGTTGTACGCGTGGTTCTGCGTTGGTGAGATCGTTGGTAGAGGATTTACTTTCACTGGCTACCATGTCTGA
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| CDS seq | ATGGCGCTCCTCCCCCGCGCGGCGCGGCTGGCGGCCCTCTCCGCGCCGCGCGCCTACTCTTCCGCCACGGCGGCGGCGGCGGGCGCGGGTGGCTCCGCGTCGCCCGCGCCATACGGCGGGGCGCCGCCGCCGGCCGCGAACTCCAAGGCGGCGGAGTTCGTGATCTCCAAGGTGGACGACCTGATGAACTGGGCGCGCCGGGGCTCGATCTGGCCCATGACGTTCGGGCTCGCCTGCTGCGCCGTGGAGATGATGCACACGGGCGCCTCCCGCTACGACTTCGACCGGTTCGGCGTCATCTTCCGCCCCTCCCCGCGCCAGTCCGACTGCATGATCGTCGCCGGCACGCTCACCAACAAGATGGCCCCCGCGCTCCGCAAGGTTTACGATCAGATGCCAGAACCTCGATGGGTTATTTCAATGGGCAGCTGTGCCAACGGTGGTGGATACTACCACTACTCCTACTCCGTTGTGCGCGGATGCGACAGGATTGTTCCCGTGGACATCTACGTCCCTGGATGCCCTCCAACTGCTGAAGCTCTACTGTATGGCGTCCTGCAGTTGCAGAAGAAGATCAACAGGCGCAGGGATTTCCTTCACTGGTGGAACAATGATGTAACATTGGATCTAATGGCGGCGCTGGCGTCGAAGCTGGCACAGATGCAGGCGAAGGTGTGCGACGCGGCGAGGTTCGCGGCGAAGCACGGGTGCGCGTACCACAGGGCGCTCATGGAGAAGAACCAGAAGTACGTCGCCGACCCGCCCACCATCGAGAGGTGCCAGGAGCTCTCCAAGCAGCTCTTCTACACCCGCCTCGCCAGCCTTCCTGGTCGCTATGAGGCATTCTGGAAGGAAGCGGATCAAGTGAAGAACTTCTGGAGAAACAGAAAGGATCTGAACGTTGAGCATGCTGGCGTTGCTGCACTTTTTGGCATTGAGTTGTACGCGTGGTTCTGCGTTGGTGAGATCGTTGGTAGAGGATTTACTTTCACTGGCTACCATGTCTGA
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| Protein seq | MALLPRAARLAALSAPRAYSSATAAAAGAGGSASPAPYGGAPPPAANSKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGASRYDFDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGVLQLQKKINRRRDFLHWWNNDVTLDLMAALASKLAQMQAKVCDAARFAAKHGCAYHRALMEKNQKYVADPPTIERCQELSKQLFYTRLASLPGRYEAFWKEADQVKNFWRNRKDLNVEHAGVAALFGIELYAWFCVGEIVGRGFTFTGYHV |
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| Function | NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [UniProtKB/Swiss-Prot:P42027] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_05G0422500 | OsZS97_05T0422500.1 | Chr05 | 27210593 | 27216658 | + | makerRMon | ||
| CDS seq | ATGGCGCTCCTCCCCCGCGCGGCGCGGCTGGCGGCCCTCTCCGCGCCGCGCGCCTACTCTTCCGCCACGGCGGCGGCGGCGGGCGCGGGTGGCTCCGCGTCGCCCGCGCCATACGGCGGGGCGCCGCCGCCGGCCGCGAACTCCAAGGCGGCGGAGTTCGTGATCTCCAAGGTGGACGACCTGATGAACTGGGCGCGCCGGGGCTCGATCTGGCCCATGACGTTCGGGCTCGCCTGCTGCGCCGTGGAGATGATGCACACGGGCGCCTCCCGCTACGACTTCGACCGGTTCGGCGTCATCTTCCGCCCCTCCCCGCGCCAGTCCGACTGCATGATCGTCGCCGGCACGCTCACCAACAAGATGGCCCCCGCGCTCCGCAAGGTTTACGATCAGATGCCAGAACCTCGATGGGTTATTTCAATGGGCAGCTGTGCCAACGGTGGTGGATACTACCACTACTCCTACTCCGTTGTGCGCGGATGCGACAGGATTGTTCCCGTGGACATCTACGTCCCTGGATGCCCTCCAACTGCTGAAGCTCTACTGTATGGCGTCCTGCAGTTGCAGAAGAAGATCAACAGGCGCAGGGATTTCCTTCACTGGTGGAACAATGATGTAACATTGGATCTAATGGCGGCGCTGGCGTCGAAGCTGGCACAGATGCAGGCGAAGGTGTGCGACGCGGCGAGGTTCGCGGCGAAGCACGGGTGCGCGTACCACAGGGCGCTCATGGAGAAGAACCAGAAGTACGTCGCCGACCCGCCCACCATCGAGAGGTGCCAGGAGCTCTCCAAGCAGCTCTTCTACACCCGCCTCGCCAGCCTTCCTGGTCGCTATGAGGCATTCTGGAAGGAAGCGGATCAAGTGAAGAACTTCTGGAGAAACAGAAAGGATCTGAACGTTGAGCATGCTGGCGTTGCTGCACTTTTTGGCATTGAGTTGTACGCGTGGTTCTGCGTTGGTGAGATCGTTGGTAGAGGATTTACTTTCACTGGCTACCATGTCTGA
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| Protein seq | MALLPRAARLAALSAPRAYSSATAAAAGAGGSASPAPYGGAPPPAANSKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGASRYDFDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGVLQLQKKINRRRDFLHWWNNDVTLDLMAALASKLAQMQAKVCDAARFAAKHGCAYHRALMEKNQKYVADPPTIERCQELSKQLFYTRLASLPGRYEAFWKEADQVKNFWRNRKDLNVEHAGVAALFGIELYAWFCVGEIVGRGFTFTGYHV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 8.2704585 | 22.2525155 | 14.2643635 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0533700 | RBH | 9.426044 | 9.596715 | 19.875496 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g45730 | RBH | 5.978021 | 6.049833 | 4.754592 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0533700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0024810 | RBH | 2.152446 | 32.096939 | 12.467864 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0024620 | RBH | 0.892562 | 5.586044 | 10.827929 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0024600 | RBH | 4.232586 | 48.860863 | 21.193615 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0024620 | RBH | 0.675945 | 0.716974 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0024650 | RBH | 22.436806 | 25.028406 | 37.560738 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0411300 | RBH | 12.2484035 | 56.780918 | 30.1172505 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0024240 | RBH | 0.0 | 2.326487 | 0.327950 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0491200 | RBH | 16.947334 | 18.497586 | 33.769806 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0024450 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0024320 | RBH | 0.0 | 36.860477 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0024500 | RBH | 15.743811 | 25.943569 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0024510 | RBH | 0.246424 | 2.604202 | 0.611457 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0024570 | RBH | 0.0 | 13.251677 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G024000 | RBH | 0.0 | 16.662069 | 3.441415 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0024450 | RBH | 0.0 | 16.161068 | 6.956816 |
